Contig 011387:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF039J08-                                                       GCTTGTACGTGAATAA
rJMSF040J08+                                                      GCTTGTACGTGAATAA
rJMSF039J08+                                                      GCTTGTACGTGAATAA
                      ____________________________________________________________
consensus                                                         GCTTGTACGTGAATAA
 
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JMSF039J08-           CTCGTTACAGCAAAATTAGGATGATGATGATTAATGGGTTTTACGGTGGTTAACTGGTTA
rJMSF040J08+          CTCGTTACAGCAAAATTAGGATGATGATGATTAATGGGTTTTACGGTGGTTAACTGGTTA
rJMSF039J08+          CTCGTTACAGCAAAATTAGGATGATGATGATTAATGGGTTTTACGGTGGTTAACTGGTTA
                      ____________________________________________________________
consensus             CTCGTTACAGCAAAATTAGGATGATGATGATTAATGGGTTTTACGGTGGTTAACTGGTTA
 
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JMSF039J08-           TTATAAGGGGGCGTTTGGTTAATGTTAGTTACCAATTTCTAGAGGTACCCTCACTCACGC
rJMSF040J08+          TTATAAGGGGGCGTTTGGTTAATGTTAGTTACCAATTTCTAGAGGTACCCTCACTCACGC
rJMSF039J08+          TTATAAGGGGGCGTTTGGTTAATGTTAGTTACCAATTTCTAGAGGTACCCTCACTCACGC
                      ____________________________________________________________
consensus             TTATAAGGGGGCGTTTGGTTAATGTTAGTTACCAATTTCTAGAGGTACCCTCACTCACGC
 
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JMSF039J08-           CTTGCGCACCAGAGTTACTCACCATCAGCGCCTCTTCTGATACCTTTCTCCTTCCTCCCA
rJMSF040J08+          CTTGCGCACCAGAGTTACTCACCATCAGCGCCTCTTCTGATACCTTTCTCCTTCCTCCCA
rJMSF039J08+          CTTGCGCACCAGAGTTACTCACCATCAGCGCCTCTTCTGATACCTTTCTCCTTCCTCCCA
                      ____________________________________________________________
consensus             CTTGCGCACCAGAGTTACTCACCATCAGCGCCTCTTCTGATACCTTTCTCCTTCCTCCCA
 
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JMSF039J08-           TCAGGGTGCAAAGATATGGCAATTAGTTATATGCGGTCATTAAAAAGTGTCGTCATCCCC
rJMSF040J08+          TCAGGGTGCAAAGATATGGCAATTAGTTATATGCGGTCATTAAAAAGTGTCGTCATCCCC
rJMSF039J08+          TCAGGGTGCAAAGATATGGCAATTAGTTATATGCGGTCATTAAAAAGTGTCGTCATCCCC
                      ____________________________________________________________
consensus             TCAGGGTGCAAAGATATGGCAATTAGTTATATGCGGTCATTAAAAAGTGTCGTCATCCCC
 
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JMSF039J08-           AAGGAGATTGCTGGAGTAATTGGCTGCAGAACATTTGCTGCCGGAGGTGGTAAAGCAAAG
rJMSF040J08+          AAGGAGATTGCTGGAGTAATTGGCTGCAGAACATTTGCTGCCGGAGGTGGTAAAGCAAAG
rJMSF039J08+          AAGGAGATTGCTGGAGTAATTGGCTGCAGAACATTTGCTGCCGGAGGTGGTAAAGCAAAG
                      ____________________________________________________________
consensus             AAGGAGATTGCTGGAGTAATTGGCTGCAGAACATTTGCTGCCGGAGGTGGTAAAGCAAAG
 
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JMSF039J08-           AAGTCTAAAGGTGCAGCTGCTGATGCTCCAAAGGTGTCTTCACTCAGCAAAGAAGTGAAA
rJMSF040J08+          AAGTCTAAAGGTGCAGCTGCTGATGCTCCAAAGGTGTCTTCACTCAGCAAAGAAGTGAAA
rJMSF039J08+          AAGTCTAAAGGTGCAGCTGCTGATGCTCCAAAGGTGTCTTCACTCAGCAAAGAAGTGAAA
                      ____________________________________________________________
consensus             AAGTCTAAAGGTGCAGCTGCTGATGCTCCAAAGGTGTCTTCACTCAGCAAAGAAGTGAAA
 
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JMSF039J08-           GCAAGTACAGTTGTCGGTGCTAATATACTCAAGGATGGAACGGACCCTAAAGTCTTGGCC
rJMSF040J08+          GCAAGTACAGTTGTCGGTGCTAATATACTCAAGGATGGAACGGACCCTAAAGTCTTGGCC
rJMSF039J08+          GCAAGTACAGTTGTCGGTGCTAATATACTCAAGGATGGAACGGACCCTAAAGTCTTGGCC
                      ____________________________________________________________
consensus             GCAAGTACAGTTGTCGGTGCTAATATACTCAAGGATGGAACGGACCCTAAAGTCTTGGCC
 
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JMSF039J08-           GACTCTGAGTACCCTGAATGGCTGTGGCACTTGCTGGATAAAAAACCAGCACTTAGTGAG
rJMSF040J08+          GACTCTGAGTACCCTGAATGGCTGTGGCACTTGCTGGATAAAAAACCAGCACTTAGTGAG
rJMSF039J08+          GACTCTGAGTACCCTGAATGGCTGTGGCACTTGCTGGATAAAAAACCAGCACTTAGTGAG
                      ____________________________________________________________
consensus             GACTCTGAGTACCCTGAATGGCTGTGGCACTTGCTGGATAAAAAACCAGCACTTAGTGAG
 
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JMSF039J08-           CTAAGAAGGAAAGACTTAGAGACACTCCCTTACGAGGACCTCAAACGCTTTGTCAAGCTC
rJMSF040J08+          CTAAGAAGGAAAGACTTAGAGACACTCCCTTACGAGGACCTCAAACGCTTTGTCAAGCTC
rJMSF039J08+          CTAAGAAGGAAAGACTTAGAGACACTCCCTTACGAGGACCTCAAACGCTTTGTCAAGCTC
                      ____________________________________________________________
consensus             CTAAGAAGGAAAGACTTAGAGACACTCCCTTACGAGGACCTCAAACGCTTTGTCAAGCTC
 
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JMSF039J08-           GATAACCGAGCAAGGATCAAGGAAAATAATTCTGTTAGGGCCAAGAACTAAGTGTAGTCG
rJMSF040J08+          GATAACCGAGCAAGGATCAAGGAAAATAATTCTGTTAGGGCCAAGAACTAAGTGTAGTCG
rJMSF039J08+          GATAACCGAGCAAGGATCAAGGAAAATAATTCTGTTAGGGCCAAGAACTAAGTGTAGTCG
                      ____________________________________________________________
consensus             GATAACCGAGCAAGGATCAAGGAAAATAATTCTGTTAGGGCCAAGAACTAAGTGTAGTCG
 
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JMSF039J08-           ACATCAGTCCTTTCTATACTTCAATGTTTTGTTGTCATGCATCATGAAAGATAAAAGAAT
rJMSF040J08+          ACATCAGTCCTTTCTATACTTCAATGTTTTGTTGTCATGCATCATGAAAGATAAAAGAAT
rJMSF039J08+          ACATCAGTCCTTTCTATACTTCAATGTTTTGTTGTCATGCATCATGAAAGATAAAAGAAT
                      ____________________________________________________________
consensus             ACATCAGTCCTTTCTATACTTCAATGTTTTGTTGTCATGCATCATGAAAGATAAAAGAAT
 
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JMSF039J08-           TTGTATGAATTATGATGGTTGAA                                     
rJMSF040J08+          TTGTATGAATTATGATGGTTGAAATTTTGCTGTGTTGAAGTAGACAACAC          
rJMSF039J08+          TTGTATGAATTATGATGGTTGAAATTTTGCTGTGTTGAAGTAGACAACACCAAGCGTTTC
                      ____________________________________________________________
consensus             TTGTATGAATTATGATGGTTGAAATTTTGCTGTGTTGAAGTAGACAACACCAAGCGTTTC