clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF021I10 | Sequence | 646 | 006501 (2) | ref|XP_009592676.1| | 1e-73 | PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 2-like isoform X1 | 708 | 011372 (3) | ref|XP_011070236.1| | 8e-78 | PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 2 isoform X3 [Sesa |
JMSF027L16 | Sequence | 641 | 006501 (2) | ref|XP_009592676.1| | 1e-73 | PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 2-like isoform X1 | 755 | 011372 (3) | ref|XP_011070236.1| | 2e-87 | PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 2 isoform X3 [Sesa |
JMSF036C01 | Sequence | 219 | 011372 (3) |
This contig is upended
. : . : . : . : . : . :
rJMSF021I10+ GGAGATCTGAATTACAGAA
rJMSF027L16+ CCCTAACGATCCCATCTCACGATCAGATATTCTGGTTTGGAGATCTGAATTACAGAA
____________________________________________________________
consensus CCCTAACGATCCCATCTCACGATCAGATATTCTGGTTTGGAGATCTGAATTACAGAA
. : . : . : . : . : . :
rJMSF021I10+ TCAGCCTGGCAGATAGTGAAGTGAGAAAGCTCGTTTCACGAAAGCAGTGGGACGAGCTCC
rJMSF027L16+ TCAGCCTGGCAGATAGTGAAGTGAGAAAGCTCGTTTCACGAAAGCAGTGGGACGAGCTCC
____________________________________________________________
consensus TCAGCCTGGCAGATAGTGAAGTGAGAAAGCTCGTTTCACGAAAGCAGTGGGACGAGCTCC
. : . : . : . : . : . :
rJMSF021I10+ TCGATCATGATCAGCTGAGCAAGGAGCTAAGAACTGGGCATGTTTTCGATGGCTGGAAAG
rJMSF027L16+ TCGATCATGATCAGCTGAGCAAGGAGCTAAGAACTGGGCATGTTTTCGATGGCTGGAAAG
____________________________________________________________
consensus TCGATCATGATCAGCTGAGCAAGGAGCTAAGAACTGGGCATGTTTTCGATGGCTGGAAAG
. : . : . : . : . : . :
rJMSF021I10+ AAGGAGCCATCAACTTTGCACCAACTTACAAATACGAGTTCAACTCAGACAGATACATCG
rJMSF027L16+ AAGGAGCCATCAACTTTGCACCAACTTACAAATACGAGTTCAACTCAGACAGATACATCG
____________________________________________________________
consensus AAGGAGCCATCAACTTTGCACCAACTTACAAATACGAGTTCAACTCAGACAGATACATCG
. : . : . : . : . : . :
rJMSF021I10+ GGGAAACCCCGCGAGAAGGGGAGAAGAGGAGATCCCCAGCATGGTGTGATCGAATACTAT
rJMSF027L16+ GGGAAACCCCGCGAGAAGGGGAGAAGAGGAGATCCCCAGCATGGTGTGATCGAATACTAT
____________________________________________________________
consensus GGGAAACCCCGCGAGAAGGGGAGAAGAGGAGATCCCCAGCATGGTGTGATCGAATACTAT
. : . : . : . : . : . :
rJMSF021I10+ GGTTGGGGAAAGGCATAAAACAGCTGTTTTACAAAAGGGCAGACATAAGATTATCAGACC
rJMSF027L16+ GGTTGGGGAAAGGCATAAAACAGCTGTTTTACAAAAGGGCAGACATAAGATTATCAGACC
____________________________________________________________
consensus GGTTGGGGAAAGGCATAAAACAGCTGTTTTACAAAAGGGCAGACATAAGATTATCAGACC
. : . : . : . : . : . :
rJMSF021I10+ ATAGACCAGTGAGTTCTATGTTCACAGTCGAAGTAGAAATCTTTAACCAACGAAAGCTCC
rJMSF027L16+ ATAGACCAGTGAGTTCTATGTTCACAGTCGAAGTAGAAATCTTTAACCAACGAAAGCTCC
____________________________________________________________
consensus ATAGACCAGTGAGTTCTATGTTCACAGTCGAAGTAGAAATCTTTAACCAACGAAAGCTCC
. : . : . : . : . : . :
rJMSF021I10+ AACGAGCCCTCAACGTCAAAGCTGCAGCTATACATCCTGATATTTTGCTTCTTGATGAGA
rJMSF027L16+ AACGAGCCCTCAACGTCAAAGCTGCAGCTATACATCCTGATATTTTGCTTCTTGATGAGA
____________________________________________________________
consensus AACGAGCCCTCAACGTCAAAGCTGCAGCTATACATCCTGATATTTTGCTTCTTGATGAGA
. : . : . : . : . : . :
rJMSF021I10+ TTTAAAATATATATATATATATATAGATGATTACCAGGTTTGCTGAGTTATCTTTTTGCA
rJMSF027L16+ TTTAAAATATATATATATATATATAGATGATTACCAGGTTTGCTGAGTTATCTTTTTGCA
____________________________________________________________
consensus TTTAAAATATATATATATATATATAGATGATTACCAGGTTTGCTGAGTTATCTTTTTGCA
. : . : . : . : . : . :
rJMSF021I10+ GATCTGAACTAGATTGGATTAAGGTTGTTTGAATTGACTGGGATAATATAATGCTCCAAC
rJMSF027L16+ GATCTGAACTAGATTGGATTAAGGTTGTTTGAATTGACTGGGATAATATAATGCTCCAAC
rJMSF036C01+ GAATTGACTGGGATAATATANTGCTCCAAC
____________________________________________________________
consensus GATCTGAACTAGATTGGATTAAGGTTGTTTGAATTGACTGGGATAATATAATGCTCCAAC
. : . : . : . : . : . :
rJMSF021I10+ TTTTGGTTTAAATCAAACCTAGTCCAATAGTTTGCAATATTTTTTTATTTTTGAATCTAT
rJMSF027L16+ TTTTGGTTTAAATCAAACCTAGTCCAATAGTTTGCAATATTTTTTTATTTTTGAATCTAT
rJMSF036C01+ TNTTGGNNTNAATCAAACCTAGTCCAATAGTTTGCAATANTTTNTTATTTTTGAATCNAT
____________________________________________________________
consensus TTTTGGTTTAAATCAAACCTAGTCCAATAGTTTGCAATATTTTTTTATTTTTGAATCTAT
. : . : . : . : . : . :
rJMSF021I10+ ATATAAAACT-TTGTGAGGCAAAAGAGGGACCATAAATTCA-TTAAATTTTGTCATGCTC
rJMSF027L16+ ATATAAAACT-TTGTGAGGCAAAAGAGGGACCATAAATTCA-TTAAATTTTGTCATGCTC
rJMSF036C01+ ATATAAAACTCTCGTGAGGCAAAAGAGGGACCATAAATTCACTTAAATTTTGTCACGCTC
____________________________________________________________
consensus ATATAAAACT-TTGTGAGGCAAAAGAGGGACCATAAATTCA-TTAAATTTTGTCATGCTC
. : . : . : . : . : . :
rJMSF021I10+ CTCCTTTTGGAGTGTATCAGAGAGAAGATGG
rJMSF027L16+ CTCCTTTTGGAGTGTATCAGAGAAAAGATGGGANAAAA
rJMSF036C01+ CTCCNTTTGGAGTGTATCCGAGAAAAGATGGGATAAAAAGATGTCTGTANCAACTGTAAA
____________________________________________________________
consensus CTCCTTTTGGAGTGTATCAGAGAAAAGATGGGATAAAAAGATGTCTGTANCAACTGTAAA