Contig 011365:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034N20Sequence601011365 (2)ref|XP_011092103.1|249PREDICTED: uncharacterized protein LOC105172402 [Sesamum indicum]676011365 (2)gb|EYU42200.1|3e-108hypothetical protein MIMGU_mgv1a012059mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF034N20- GACCCAGCTGTCGCCTTATCG
                      ____________________________________________________________
consensus GACCCAGCTGTCGCCTTATCG
 
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JMSF034N20- TCTCTCTCTCAGCTCCACTACCTTCATCAATGGCGATAACCCATACGTTCAAGCCTCAAG
                      ____________________________________________________________
consensus TCTCTCTCTCAGCTCCACTACCTTCATCAATGGCGATAACCCATACGTTCAAGCCTCAAG
 
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JMSF034N20- TCCTAACCTCCTTCACTCCCTTACCAAAACCCATCAATGTCTCACACTACTTGGGCGTCA
                      ____________________________________________________________
consensus TCCTAACCTCCTTCACTCCCTTACCAAAACCCATCAATGTCTCACACTACTTGGGCGTCA
 
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JMSF034N20- CTCTTCCAACAACCCGAACCCTTCGTGGCCCATTGCGTAGCCTATCAAGAAGATTGTTCC
                      ____________________________________________________________
consensus CTCTTCCAACAACCCGAACCCTTCGTGGCCCATTGCGTAGCCTATCAAGAAGATTGTTCC
 
. : . : . : . : . : . :
JMSF034N20- TTCCTTCAGTTTCGGGCCTCTGGGATGCAATAACGGGCGGTAACTCTGCCCGCGAAGCGG
rJMSF034N20+ CTCTGCCCGCGAAGCGG
                      ____________________________________________________________
consensus TTCCTTCAGTTTCGGGCCTCTGGGATGCAATAACGGGCGGTAACTCTGCCCGCGAAGCGG
 
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JMSF034N20- TGATGGCCATTCGCCGTGGATTGCTTCTCTTCAGACAGGGTGATGTGCTGGGGTCTTTGG
rJMSF034N20+ TGATGGCCATTCGCCGTGGA-TGCTTCTCTTCAGACAGGGTGATGTGCTGGGGTCTTTGG
                      ____________________________________________________________
consensus TGATGGCCATTCGCCGTGGATTGCTTCTCTTCAGACAGGGTGATGTGCTGGGGTCTTTGG
 
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JMSF034N20- TGGAGTTTGACAAGGCAATTGAGCTCGATCCTCGCCAGAAAGAATATCTTTGGCAAAGGG
rJMSF034N20+ TGGAGTTTGACAAGGCAATTGAGCTCGATCCTCGCCAGAAAGAATATCTTTGGCAAAGGG
                      ____________________________________________________________
consensus TGGAGTTTGACAAGGCAATTGAGCTCGATCCTCGCCAGAAAGAATATCTTTGGCAAAGGG
 
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JMSF034N20- GTTTGTCACTATATTATCTTGATAGGTTTGAGGAAGGTGCAGAGCAATTCCGGATAGATG
rJMSF034N20+ GTTTGTCACTATATTATCTTGATAGGTTTGAGGAAGGTGCAGAGCAATTCCGGATAGATG
                      ____________________________________________________________
consensus GTTTGTCACTATATTATCTTGATAGGTTTGAGGAAGGTGCAGAGCAATTCCGGATAGATG
 
. : . : . : . : . : . :
JMSF034N20- TTGCCAAGAACCCTAATGACACGGAGGAGTCAATATGGTGCTTTCTCTGTGAGGCTCAGT
rJMSF034N20+ TTGCCAAGAACCCTAATGACACGGAGGAGTCAATATGGTGCTTTCTCTGTGAGGCTCAGT
                      ____________________________________________________________
consensus TTGCCAAGAACCCTAATGACACGGAGGAGTCAATATGGTGCTTTCTCTGTGAGGCTCAGT
 
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JMSF034N20- TGTATAGAGTTGATGAAGCTAGAAGAAAATTTCTTGTGGTCGGTAGAGATCCAAGACCTG
rJMSF034N20+ TGTATAGAGTTGATGAAGCTAGAAGAAAATTTCTTGTGGTCGGTAGAGATCCAAGACCTG
                      ____________________________________________________________
consensus TGTATAGAGTTGATGAAGCTAGAAGAAAATTTCTTGTGGTCGGTAGAGATCCAAGACCTG
 
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JMSF034N20- TTATGAGAGAAGCTTATGACATGTTTAAGGATGGTGGTGA
rJMSF034N20+ TTATGAGAGAAGCTTATGACATGTTTAAGGATGGTGGTGACCCAGAAAAGCTTGTTGCGG
                      ____________________________________________________________
consensus TTATGAGAGAAGCTTATGACATGTTTAAGGATGGTGGTGACCCAGAAAAGCTTGTTGCGG
 
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rJMSF034N20+ CATTTTCCAGTGGGCAGCCAAACGAGTACTTCTATGCTTCTCTCTATGCCGGGCTATATT
                      ____________________________________________________________
consensus CATTTTCCAGTGGGCAGCCAAACGAGTACTTCTATGCTTCTCTCTATGCCGGGCTATATT
 
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rJMSF034N20+ ATGAATCTCAGAAGGACTCAGAAAGATCGAAACTTCATCTGATTGCTTCATGTCAATCGC
                      ____________________________________________________________
consensus ATGAATCTCAGAAGGACTCAGAAAGATCGAAACTTCATCTGATTGCTTCATGTCAATCGC
 
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rJMSF034N20+ TTTATGGATCAAGGTCTGACGATTACATGGTTTCTCTTGCCAAGGTTCATTGCCAATGTC
                      ____________________________________________________________
consensus TTTATGGATCAAGGTCTGACGATTACATGGTTTCTCTTGCCAAGGTTCATTGCCAATGTC
 
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rJMSF034N20+ GGAATTGGAACTTTACTTGACCGAAATATTCACCAAATCGCTGTAAGAATATATGGTTTC
                      ____________________________________________________________
consensus GGAATTGGAACTTTACTTGACCGAAATATTCACCAAATCGCTGTAAGAATATATGGTTTC
 
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rJMSF034N20+ AGACCTCCTCATTCCTAGAACTAGTTATTGGTATATAGATTACAACAATCATATTTCATT
                      ____________________________________________________________
consensus AGACCTCCTCATTCCTAGAACTAGTTATTGGTATATAGATTACAACAATCATATTTCATT