Contig 011356:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF032F03Sequence693010806 (2)ref|XP_009779345.1|9e-04PREDICTED: nudix hydrolase 16, mitochondrial isoform X2 [Nicotiana sylvestris]724011356 (2)ref|XP_009598985.1|5e-47PREDICTED: nudix hydrolase 16, mitochondrial-like isoform X1 [Nicotiana tomento
JMSF035K16Sequence641010806 (2)ref|XP_009779345.1|7e-04PREDICTED: nudix hydrolase 16, mitochondrial isoform X2 [Nicotiana sylvestris]731011356 (2)ref|XP_009598985.1|5e-47PREDICTED: nudix hydrolase 16, mitochondrial-like isoform X1 [Nicotiana tomento

Alignment

This contig is upended


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rJMSF035K16+                                                     GAGGCAGCTATGCGTGA
rJMSF032F03+                                                                 CGTGA
                      ____________________________________________________________
consensus                                                        GAGGCAGCTATGCGTGA
 
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rJMSF035K16+          AGCCATTGAGGAGGCTGGAGTTCGTGGGGATCTAGTGGTAAGCTTCCAAGCTTCTGTTGC
rJMSF032F03+          AGCCATTGAGGAGGCTGGAGTTCGTGGGGATCTAGTGGTAAGCTT-CAAGCTTCTGTTGC
                      ____________________________________________________________
consensus             AGCCATTGAGGAGGCTGGAGTTCGTGGGGATCTAGTGGTAAGCTTCCAAGCTTCTGTTGC
 
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rJMSF035K16+          ATCACTTCATCTATAAAATCCAAATGAACAATCTGGTATTTTGTTATCTTTTGTGGTCGA
rJMSF032F03+          ATCACTTCATCTATAAAATCCAAATGAACAATCTGGTATTTTGTTATCTTTTGTGGTCGA
                      ____________________________________________________________
consensus             ATCACTTCATCTATAAAATCCAAATGAACAATCTGGTATTTTGTTATCTTTTGTGGTCGA
 
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rJMSF035K16+          AACTTGGAAAGCCTCTCATTTTGTAATGATGTTCATCATGATCCTATTGCCTCTACATTT
rJMSF032F03+          AACTTGGAAAGCCTCTCATTTTGTAATGATGTTCATCATGATCCTATTGCCTCTACATTT
                      ____________________________________________________________
consensus             AACTTGGAAAGCCTCTCATTTTGTAATGATGTTCATCATGATCCTATTGCCTCTACATTT
 
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rJMSF035K16+          TTGCAATGATTAAAGGTGTTACGTTCCTCATTACAGTATTTGTCTTGATATTCAAAGAAA
rJMSF032F03+          TTGCAATGATTAAAGGTGTTACGTTCCTCATTACAGTATTTGTCTTGATATTCAAAGAAA
                      ____________________________________________________________
consensus             TTGCAATGATTAAAGGTGTTACGTTCCTCATTACAGTATTTGTCTTGATATTCAAAGAAA
 
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rJMSF035K16+          GTGAGGCTTCATTTTGTGATTCCATTGTTCCTGATTTTGCACCTCGATCTATTTTCTACA
rJMSF032F03+          GTGAGGCTTCATTTTGTGATTCCATTGTTCCTGATTTTGCACCTCGATCTATTTTCTACA
                      ____________________________________________________________
consensus             GTGAGGCTTCATTTTGTGATTCCATTGTTCCTGATTTTGCACCTCGATCTATTTTCTACA
 
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rJMSF035K16+          TTTTCAGCATTTCCTGGGGTACTACCTATTTAAAAGCAAGACGCTTCAGGATGAGTTCAG
rJMSF032F03+          TTTTCAGCATTTCCTGGGGTACTACCTATTTAAAAGCAAGACGCTTCAGGATGAGTTCAG
                      ____________________________________________________________
consensus             TTTTCAGCATTTCCTGGGGTACTACCTATTTAAAAGCAAGACGCTTCAGGATGAGTTCAG
 
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rJMSF035K16+          TCCAGAGGGTTTGTGCAAAGCTTCCATGTTTGCTTTGCTGGTGAAGGAAGAGCTGGATTC
rJMSF032F03+          TCCAGAGGGTTTGTGCAAAGCTTCCATGTTTGCTTTGCTGGTGAAGGAAGAGCTGGATTC
                      ____________________________________________________________
consensus             TCCAGAGGGTTTGTGCAAAGCTTCCATGTTTGCTTTGCTGGTGAAGGAAGAGCTGGATTC
 
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rJMSF035K16+          TTGGCCAGAGCAGAGCCTTCGGAAAAGAAGCTGGCTGACAATTCCCGAAGCAATTGAGTG
rJMSF032F03+          TTGGCCAGAGCAGAGCCTTCGGAAAAGAAGCTGGCTGACAATTCCCGAAGCAATTGAGTG
                      ____________________________________________________________
consensus             TTGGCCAGAGCAGAGCCTTCGGAAAAGAAGCTGGCTGACAATTCCCGAAGCAATTGAGTG
 
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rJMSF035K16+          TTGTCGGCACCCATGGATGCGAGAGGCCCTCGAAGAAGGTTTCTTGAAGTGGCACGCCAG
rJMSF032F03+          TTGTCGGCACCCATGGATGCGAGAGGCCCTCGAAGAAGGTTTCTTGAAGTGGCACGCCAG
                      ____________________________________________________________
consensus             TTGTCGGCACCCATGGATGCGAGAGGCCCTCGAAGAAGGTTTCTTGAAGTGGCACGCCAG
 
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rJMSF035K16+          CGGTATGACAAGTACAATGAATAAATGCAAAGACTAGGCTTTCTTGTCTCCTATATATTG
rJMSF032F03+          CGGTATGACAAGTACAATGAATAAATGCAAAGACTAGGCTTTCTTGTCTCCTATATATTG
                      ____________________________________________________________
consensus             CGGTATGACAAGTACAATGAATAAATGCAAAGACTAGGCTTTCTTGTCTCCTATATATTG
 
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rJMSF035K16+          AATGGTTTTAGATGTTTAGTGAAGGCACCACCACCACCGACTTTTAGCGGAACTAGACAG
rJMSF032F03+          AATGGTTTTAGATGTTTAGTGAAGGCACCACCACCACCGACTTTTAGCGGAACTAGACAG
                      ____________________________________________________________
consensus             AATGGTTTTAGATGTTTAGTGAAGGCACCACCACCACCGACTTTTAGCGGAACTAGACAG
 
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rJMSF035K16+          TGTGACCTATGAAAGAATCTGCAAATAGTCTTATGTTTTAGGTTTTTCAAAACC      
rJMSF032F03+          TGTGACCTATGAAAGAATCTGCAAATAGTCTTATGTTTTAGGTTTTTCAAAACCCTGTTT
                      ____________________________________________________________
consensus             TGTGACCTATGAAAGAATCTGCAAATAGTCTTATGTTTTAGGTTTTTCAAAACCCTGTTT