Contig 011354:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019L15Sequence483007860 (2)737011354 (2)
JMSF032B09Sequence691007860 (2)729011354 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF019L15+ GTACTGCAAATNGGATACCCGCTGTGAACACG
rJMSF032B09+ GTGAACACG
                      ____________________________________________________________
consensus GTACTGCAAATNGGATACCCGCTGTGAACACG
 
. : . : . : . : . : . :
rJMSF019L15+ CACTTTATCTCGGAGAAACTTGCTCTTCTGTTCCCCAACCTCATCTATGGTATTCTTAAG
rJMSF032B09+ CACTTTATCTCGGAGAAACTTGCTCTTCTGNTCCCCAACCTCATCTATGGTATTCTTAAG
                      ____________________________________________________________
consensus CACTTTATCTCGGAGAAACTTGCTCTTCTGTTCCCCAACCTCATCTATGGTATTCTTAAG
 
. : . : . : . : . : . :
rJMSF019L15+ AAGCAAGGATTCAAGCCCTATAAGGATGAACTTGGTGCTGAAAATACTAGTGTATATGGT
rJMSF032B09+ AAGCAAGGATTCAAGCCCTATAAGGATGAACTTGGTGCTGAAAATACTAGTGTATATGGT
                      ____________________________________________________________
consensus AAGCAAGGATTCAAGCCCTATAAGGATGAACTTGGTGCTGAAAATACTAGTGTATATGGT
 
. : . : . : . : . : . :
rJMSF019L15+ TTTGATGATCGATTGGTCCAATGACAGCATTATGATGATCGTGCCACACTTGCTGATCCT
rJMSF032B09+ TTTGATGATCGATTGGTCCAATGACAGCATTATGATGATCGTGCCACACTTGCTGATCCT
                      ____________________________________________________________
consensus TTTGATGATCGATTGGTCCAATGACAGCATTATGATGATCGTGCCACACTTGCTGATCCT
 
. : . : . : . : . : . :
rJMSF019L15+ CCTGCCTCTACTGCTCCAATGCCTTCTACATCTGCTCCAGCGTTTTATAATGAGACAGAG
rJMSF032B09+ CCTGCCTCTACTGCTCCAATGCCTTCTACATCTGCTCCAGCGTTTTATAATGAGACAGAG
                      ____________________________________________________________
consensus CCTGCCTCTACTGCTCCAATGCCTTCTACATCTGCTCCAGCGTTTTATAATGAGACAGAG
 
. : . : . : . : . : . :
rJMSF019L15+ TCATCTCAAGCTCCTGCCTCTTCTTCTATGCCTAATGAGCCTCCAGCGTTGATTACTCAC
rJMSF032B09+ TCATCTCAAGCTCCTGCCTCTTCTTCTATGCCTAATGAGCCTCCAGCGTTGATTACTCAC
                      ____________________________________________________________
consensus TCATCTCAAGCTCCTGCCTCTTCTTCTATGCCTAATGAGCCTCCAGCGTTGATTACTCAC
 
. : . : . : . : . : . :
rJMSF019L15+ CGTCAGCTGGCATATACAATTAAGACTTTGATTGCTCAACTTCGCAGGTCTTTCACTTCT
rJMSF032B09+ CGTCAGCTGGCATATACAATTAAGACTTTGATTGCTCAACTTCGCAGGTCTTTCACTTCT
                      ____________________________________________________________
consensus CGTCAGCTGGCATATACAATTAAGACTTTGATTGCTCAACTTCGCAGGTCTTTCACTTCT
 
. : . : . : . : . : . :
rJMSF019L15+ CAACAAACTATGGTTGCAGGGTTAGAGAAGATTCTGGAAGTGCATCTGCGCGAGATTTCA
rJMSF032B09+ CAACAAACTATGGTTGCAGGGTTAGAGAAGATTCTGGAAGTGCATCTGCGCGAGATTTCA
                      ____________________________________________________________
consensus CAACAAACTATGGTTGCAGGGTTAGAGAAGATTCTGGAAGTGCATCTGCGCGAGATTTCA
 
. : . : . : . : . : . :
rJMSF019L15+ AGGCTGGAAAAGTTGCATGCTGAAATTCTAGCCAACAGGGGTGCTACTTCTGGCTCTGAT
rJMSF032B09+ AGGCTGGAAAAGTTGCATGCTGAAATTCTAGCCAACAGGGGTGCTACTTCTGGCTCTGAT
                      ____________________________________________________________
consensus AGGCTGGAAAAGTTGCATGCTGAAATTCTAGCCAACAGGGGTGCTACTTCTGGCTCTGAT
 
. : . : . : . : . : . :
rJMSF019L15+ GCAGCAGACGATTCTAATGATGCTGTTTCTGGTTATGTAGGCTCTTCTGATTCTAGTTAC
rJMSF032B09+ GCAGCAGACGATTCTAATGATGCTGTTTCTGGTTATGTAGGCTCTTCTGATTCTAGTTAC
                      ____________________________________________________________
consensus GCAGCAGACGATTCTAATGATGCTGTTTCTGGTTATGTAGGCTCTTCTGATTCTAGTTAC
 
. : . : . : . : . : . :
rJMSF019L15+ ACTCCATCAGCCCGATGATGCTCACCACTGATGTTCACCACTTTATCAATTTATTGGCAA
rJMSF032B09+ ACTCCATCAGCCCGATGATGCTCACCACTGATGTTCACCACTTTATCAATTTATTGGCAA
                      ____________________________________________________________
consensus ACTCCATCAGCCCGATGATGCTCACCACTGATGTTCACCACTTTATCAATTTATTGGCAA
 
. : . : . : . : . : . :
rJMSF019L15+ AAAGGGGAGTGTGATAAGGGGGAGCATGGTTTGTTATGGTTTGTTTTGGTATGATAAACT
rJMSF032B09+ AAAGGGGAGTGTGATAAGGGGGAGCATGGTTTGTTATGGTTTGTTTTGGTATGATAAACT
                      ____________________________________________________________
consensus AAAGGGGAGTGTGATAAGGGGGAGCATGGTTTGTTATGGTTTGTTTTGGTATGATAAACT
 
. : . : . : . : . : . :
rJMSF019L15+ AGTACTTTTGTTGCTTTCTGACAGTATTGTGCATACTTTCGTTGG
rJMSF032B09+ AGTACTTTTGTTGCTTTCTGACAGTATTGTGCATACTTTCGTTGGTTGGATGTTTAGCTT
                      ____________________________________________________________
consensus AGTACTTTTGTTGCTTTCTGACAGTATTGTGCATACTTTCGTTGGTTGGATGTTTAGCTT