Contig 011347:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009I18Sequence549010615 (2)ref|XP_006340028.1|4e-97PREDICTED: calcium-dependent protein kinase SK5-like [Solanum tuberosum]745011347 (3)ref|XP_002518007.1|3e-61calcium-dependent protein kinase, putative [Ricinus communis] gb|EEF44525.1| cal
JMSF011F22Sequence393010615 (2)ref|XP_006340028.1|4e-22PREDICTED: calcium-dependent protein kinase SK5-like [Solanum tuberosum]264011347 (3)emb|CDP19676.1|7e-15unnamed protein product [Coffea canephora]
JMSF030G23Sequence554012043 (2)ref|XP_009794100.1|155PREDICTED: uncharacterized protein LOC104240898 [Nicotiana sylvestris] ref|XP_00695011347 (3)gb|KJB13573.1|1e-53hypothetical protein B456_002G082100 [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF009I18+ ATAGACTATGG
                      ____________________________________________________________
consensus ATAGACTATGG
 
. : . : . : . : . : . :
rJMFF009I18+ AGAGTTTCTTGCTGCTACTGTACACTTGAACAAGTTGGAAAGAGAAGAAAACCTAGTATC
                      ____________________________________________________________
consensus AGAGTTTCTTGCTGCTACTGTACACTTGAACAAGTTGGAAAGAGAAGAAAACCTAGTATC
 
. : . : . : . : . : . :
rJMFF009I18+ GGCGTTCTCTTTCTTTGACAAAGATGGTAGTGGTTACATAACCATTGATGAACTTCAGCA
                      ____________________________________________________________
consensus GGCGTTCTCTTTCTTTGACAAAGATGGTAGTGGTTACATAACCATTGATGAACTTCAGCA
 
. : . : . : . : . : . :
rJMFF009I18+ AGCCTGCAAACAATTTGGTCTAAGCGAGCTTAATCTTGATGAAATGATCAAAGAAATCGA
                      ____________________________________________________________
consensus AGCCTGCAAACAATTTGGTCTAAGCGAGCTTAATCTTGATGAAATGATCAAAGAAATCGA
 
. : . : . : . : . : . :
rJMSF011F22+ GATGGACAGATTGACTATGGGGAATTTGCAGCAATGATGAGGAAAGGCAA
rJMFF009I18+ TCAAGATAACGATGGACAGATTGACTATGGGGAATTTGCAGCAATGATGAGGAAAGGCAA
                      ____________________________________________________________
consensus TCAAGATAACGATGGACAGATTGACTATGGGGAATTTGCAGCAATGATGAGGAAAGGCAA
 
. : . : . : . : . : . :
rJMSF011F22+ TGGAGGCATTGGAAGGAGAACCATGAGAAATACTTTAAATTTGGGAGAAGCCCTAGGACT
rJMFF009I18+ TGGAGGCATTGGAAGGAGAACCATGAGAAATACTTTAAATTTGGGAGAAGCCCTAGGACT
                      ____________________________________________________________
consensus TGGAGGCATTGGAAGGAGAACCATGAGAAATACTTTAAATTTGGGAGAAGCCCTAGGACT
 
. : . : . : . : . : . :
rJMSF011F22+ ACT
rJMFF009I18+ ACTTGTAGAGGGTAAAGAATAAAGATAGCCTTTGATGCACTAATCTAAATGAATTTTGGT
                      ____________________________________________________________
consensus ACTTGTAGAGGGTAAAGAATAAAGATAGCCTTTGATGCACTAATCTAAATGAATTTTGGT
 
. : . : . : . : . : . :
rJMFF009I18+ TCATCCTTCCTAATTTCAACCATAATGATACTTGCTGCAACTATAAGGCCTCACATTCCT
                      ____________________________________________________________
consensus TCATCCTTCCTAATTTCAACCATAATGATACTTGCTGCAACTATAAGGCCTCACATTCCT
 
. : . : . : . : . : . :
rJMFF009I18+ TGTCACTAATTGCTCTCATCTCCCCTATATTCATTCATGATTGCATTTTCCCGCCTCAAC
                      ____________________________________________________________
consensus TGTCACTAATTGCTCTCATCTCCCCTATATTCATTCATGATTGCATTTTCCCGCCTCAAC
 
. : . : . : . : . : . :
rJMFF009I18+ TGGTCATAGAGGTGAAAGTTAGAAAGAATGATCAGGGATCGAGTCTCACCAGCGACAGTG
rJMSF030G23+ GGGATCGAGTCTCATCAGCAGCAGTG
                      ____________________________________________________________
consensus TGGTCATAGAGGTGAAAGTTAGAAAGAATGATCAGGGATCGAGTCTCATCAGCGGCAGTG
 
. : . : . : . : . : . :
rJMFF009I18+ TGGGAGTAACCTCTCAAAGTGAGGGGGGCTCCTTGTGTGCAATAAGCAAAGGTCTAG
rJMSF030G23+ TGGGAGCAACCTCTCAAACTGAGGGGGGCTCCTTGTGCGCAGTAAGCAAAGGTCTAGCCT
                      ____________________________________________________________
consensus TGGGAGTAACCTCTCAAAGTGAGGGGGGCTCCTTGTGTGCAGTAAGCAAAGGTCTAGCCT
 
. : . : . : . : . : . :
rJMSF030G23+ CTGTGTTCAGATGAGTTACCATGATTTACATCCTCCCAGATGCTCTGCCGGGCCGGGACG
                      ____________________________________________________________
consensus CTGTGTTCAGATGAGTTACCATGATTTACATCCTCCCAGATGCTCTGCCGGGCCGGGACG
 
. : . : . : . : . : . :
rJMSF030G23+ TGGGAGGTCTTTGGGGTTGGGGATTCAACCTTTTGGGAACAAAAATGTGGCGGTATAAGA
                      ____________________________________________________________
consensus TGGGAGGTCTTTGGGGTTGGGGATTCAACCTTTTGGGAACAAAAATGTGGCGGTATAAGA
 
. : . : . : . : . : . :
rJMSF030G23+ AAATAAAGTTGCGCCTTCGCTACTAGCTATAACTTCTGGCGTAGTGGTAAGCGTTTGATC
                      ____________________________________________________________
consensus AAATAAAGTTGCGCCTTCGCTACTAGCTATAACTTCTGGCGTAGTGGTAAGCGTTTGATC
 
. : . : . : . : . : . :
rJMSF030G23+ CTAACAAGTGATATTGTAGCCAAGAAAATCACTTCTTGAACAATTGGGCTACCTTTAAAT
                      ____________________________________________________________
consensus CTAACAAGTGATATTGTAGCCAAGAAAATCACTTCTTGAACAATTGGGCTACCTTTAAAT
 
. : . : . : . : . : . :
rJMSF030G23+ TAAGTTTGTATTTTACCTGTTCAAGCCAGTGGTGGTATGTCCGGCTTATATTTGTTCTTC
                      ____________________________________________________________
consensus TAAGTTTGTATTTTACCTGTTCAAGCCAGTGGTGGTATGTCCGGCTTATATTTGTTCTTC
 
. : . : . : . : . : . :
rJMSF030G23+ TCCATGCCTCAAGATCAAAGATGTTCATGCCGTATGCCCATGCACACTCATTAGGATCGA
                      ____________________________________________________________
consensus TCCATGCCTCAAGATCAAAGATGTTCATGCCGTATGCCCATGCACACTCATTAGGATCGA
 
. : . : . : . : . : . :
rJMSF030G23+ AACTTTTTGCTATTAGAGGGTGAGAAAAGTTCAGATAACTTTTGAAGTGCTTAAACATCA
                      ____________________________________________________________
consensus AACTTTTTGCTATTAGAGGGTGAGAAAAGTTCAGATAACTTTTGAAGTGCTTAAACATCA
 
. : . : . : . : . : . :
rJMSF030G23+ CGTACTTATCCTCCCCTCTGCAGGTTTGCACTGCTCCATTCACCTTTCCATTCATGTCAA
                      ____________________________________________________________
consensus CGTACTTATCCTCCCCTCTGCAGGTTTGCACTGCTCCATTCACCTTTCCATTCATGTCAA
 
. : . : . : . : . : . :
rJMSF030G23+ TGTCCCATAGAGGCGAAAGATCAGTTTGAACCACTATGTCATCATCAAGGAAGACCACTT
                      ____________________________________________________________
consensus TGTCCCATAGAGGCGAAAGATCAGTTTGAACCACTATGTCATCATCAAGGAAGACCACTT