Contig 011330:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024N19Sequence429012884 (2)ref|XP_009780449.1|2e-29PREDICTED: mitochondrial inner membrane protein OXA1-like [Nicotiana sylvestris615011330 (2)ref|XP_011101043.1|1e-23PREDICTED: mitochondrial inner membrane protein OXA1-like [Sesamum indicum]
JMSF024P09Sequence697012884 (2)ref|XP_009621900.1|9e-53PREDICTED: mitochondrial inner membrane protein OXA1-like [Nicotiana tomentosif787011330 (2)ref|XP_011101043.1|2e-49PREDICTED: mitochondrial inner membrane protein OXA1-like [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF024P09+ TTGACTA
                      ____________________________________________________________
consensus TTGACTA
 
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rJMSF024P09+ CTCCTGACAGCATGTATATTCTTCCAGTTTTAACAGCATTGACATTCTTGATTACAGTTG
                      ____________________________________________________________
consensus CTCCTGACAGCATGTATATTCTTCCAGTTTTAACAGCATTGACATTCTTGATTACAGTTG
 
. : . : . : . : . : . :
rJMSF024P09+ AGTTTAATGCACAGGAAGGATNGGAAGGAAATCCTGCTGGTCCCACCATTAAGAAAGTTT
                      ____________________________________________________________
consensus AGTTTAATGCACAGGAAGGATNGGAAGGAAATCCTGCTGGTCCCACCATTAAGAAAGTTT
 
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rJMFF024N19+ CTCTACTGACTGTCCCATTGACCGCTTCCTTCCCAAAGGCTATATTCA
rJMSF024P09+ CAAGAATCTTTGCTCTACTGACTGTCCCATTGACCGCTTCCTTCCCAAAGGCTATATTCA
                      ____________________________________________________________
consensus CAAGAATCTTTGCTCTACTGACTGTCCCATTGACCGCTTCCTTCCCAAAGGCTATATTCA
 
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rJMFF024N19+ TGTACTGGATTACCTCCAATCTTTTCTCCCTAACTTATGGAATGGTACTTAAAAAGCCGG
rJMSF024P09+ TGTACTGGATTACCTCCAATCTTTTCTCCCTAACTTATGGAATGGTACTTAAAAAGCCGG
                      ____________________________________________________________
consensus TGTACTGGATTACCTCCAATCTTTTCTCCCTAACTTATGGAATGGTACTTAAAAAGCCGG
 
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rJMFF024N19+ AAATGAAGAAGCTCTTGGGTATACCTATAATCCCGGTGGCACCACCATCTCCTGCCAGTC
rJMSF024P09+ AAATGAAGAAGCTCTTGGGTATACCTATAATCCCGGTGGCACCACCATCTCCTGCCAGTC
                      ____________________________________________________________
consensus AAATGAAGAAGCTCTTGGGTATACCTATAATCCCGGTGGCACCACCATCTCCTGCCAGTC
 
. : . : . : . : . : . :
rJMFF024N19+ AAAAACCCGGATTCTCTTTTTTCGAAGCGTTAAACAAGTATTCTGCAGCACAACAACAGG
rJMSF024P09+ AAAAACCCGGATTCTCTTTTTTCGAAGCGTTAAACAAGTATTCTGCAGCACAACAACAGG
                      ____________________________________________________________
consensus AAAAACCCGGATTCTCTTTTTTCGAAGCGTTAAACAAGTATTCTGCAGCACAACAACAGG
 
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rJMFF024N19+ CTCAATCGGCATCAACTAATGAAACATCCATACCTACAAACCAAAGAGTGCCACCATCCT
rJMSF024P09+ CTCAATCGGCATCAACTAATGAAACATCCATACCTACAAACCAAAGAGTGCCACCATCCT
                      ____________________________________________________________
consensus CTCAATCGGCATCAACTAATGAAACATCCATACCTACAAACCAAAGAGTGCCACCATCCT
 
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rJMFF024N19+ CGGTTCTCAGTCAAAGGATCAGAAGCTTAGAGAAACAAGTTAAAGAAAAGAAGAAAGGCG
rJMSF024P09+ CGGTTCTCAGTCAAAGGATCAGAAGCTTAGAGAAACAAGTTAAAGAAAAGAAGAAAGGCG
                      ____________________________________________________________
consensus CGGTTCTCAGTCAAAGGATCAGAAGCTTAGAGAAACAAGTTAAAGAAAAGAAGAAAGGCG
 
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rJMFF024N19+ GCAAGAAGAGGTGATGAACACCAAACTCGGACAAATTTACAATATCACTATTGTCTTCTC
rJMSF024P09+ GCAAGAAGAGGTGATGAACACCAAACTCGGACAAATTTACAATATCACTATTGTCTTCTC
                      ____________________________________________________________
consensus GCAAGAAGAGGTGATGAACACCAAACTCGGACAAATTTACAATATCACTATTGTCTTCTC
 
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rJMFF024N19+ CTTAAAATTCATTTACAAATAATGTTCACCACTTCATCCATTAAAATGTCCATAATAATT
rJMSF024P09+ CTTAAAATTCATTTACAAATAATGTTCACCACTTCATCCATTAAAATGTCCATAATAATT
                      ____________________________________________________________
consensus CTTAAAATTCATTTACAAATAATGTTCACCACTTCATCCATTAAAATGTCCATAATAATT
 
. : . : . : . : . : . :
rJMFF024N19+ GGATAATGATAGGGAGGAATTTCCGAGATTTTGACAATTTTGTAGTTTTGTTCCCCGCGA
rJMSF024P09+ GGATAATGATAGGGAGGAATTTCCGAGATTTTGACAATTTTGTAGTTTTGTTCCCCGCGA
                      ____________________________________________________________
consensus GGATAATGATAGGGAGGAATTTCCGAGATTTTGACAATTTTGTAGTTTTGTTCCCCGCGA
 
. : . : . : . : . : . :
rJMFF024N19+ CCGCGAGTGATGGCCTAAGGGGGCTTCTTTTTATCCTTATATGTAGTCATGTAGACCTCA
rJMSF024P09+ CCGCGAGTGATGGCCTAAGGGGGCTTCTTTTTATCCTTATATGTAGTCATGTAGACCTCA
                      ____________________________________________________________
consensus CCGCGAGTGATGGCCTAAGGGGGCTTCTTTTTATCCTTATATGTAGTCATGTAGACCTCA
 
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rJMFF024N19+ GCCATAACAATATAGTGA
rJMSF024P09+ GCCATAACAATATAGTGATGGTAGGAAATTATTGTTGTTTTTATACATCTGTGGTCCTTT
                      ____________________________________________________________
consensus GCCATAACAATATAGTGATGGTAGGAAATTATTGTTGTTTTTATACATCTGTGGTCCTTT