Contig 011315:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021F18Sequence690011315 (2)ref|XP_006360829.1|210PREDICTED: uncharacterized protein LOC102592067 [Solanum tuberosum]787011315 (2)ref|XP_006360829.1|250PREDICTED: uncharacterized protein LOC102592067 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021F18- GCAGACTTAAA
                      ____________________________________________________________
consensus GCAGACTTAAA
 
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JMSF021F18- GTTGCATAGTATAGTAATAGTATATCGTCAAACCCTTGGGACAATTGTAGGCTTTCCACT
                      ____________________________________________________________
consensus GTTGCATAGTATAGTAATAGTATATCGTCAAACCCTTGGGACAATTGTAGGCTTTCCACT
 
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JMSF021F18- TTCAGAGAAGCCATGGACGATTTGGGAATTCAGAAGATTCAAATCTCCGGCCCAACCCTC
                      ____________________________________________________________
consensus TTCAGAGAAGCCATGGACGATTTGGGAATTCAGAAGATTCAAATCTCCGGCCCAACCCTC
 
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JMSF021F18- GCCTCCCTCCTCAACCGCTTATCCGCTTCTCCCGGTGACCTTCACGGCCTTCTTTATGGC
                      ____________________________________________________________
consensus GCCTCCCTCCTCAACCGCTTATCCGCTTCTCCCGGTGACCTTCACGGCCTTCTTTATGGC
 
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JMSF021F18- CATGTTTCTTTCTCCACCACCAGCTCCCTCTCCGACGATACCTCCGCTTCTACTTCCGCC
                      ____________________________________________________________
consensus CATGTTTCTTTCTCCACCACCAGCTCCCTCTCCGACGATACCTCCGCTTCTACTTCCGCC
 
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JMSF021F18- GCGGCCGACGGCGCCAATGGCCCGATCCTCACTGCAATCATCACCTCCTTCACCTCCGTG
                      ____________________________________________________________
consensus GCGGCCGACGGCGCCAATGGCCCGATCCTCACTGCAATCATCACCTCCTTCACCTCCGTG
 
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JMSF021F18- CCTTCTCACCTCGCCCTGCCCCATCAATCGCACCGTCAAGATTCGTCCTCAACCCTCGTC
                      ____________________________________________________________
consensus CCTTCTCACCTCGCCCTGCCCCATCAATCGCACCGTCAAGATTCGTCCTCAACCCTCGTC
 
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JMSF021F18- GGCTGGTTCTCCGGCCGCCGGAGGACCCCTCTCCGCCCCTCGCTTCACGACTCCACCGCC
                      ____________________________________________________________
consensus GGCTGGTTCTCCGGCCGCCGGAGGACCCCTCTCCGCCCCTCGCTTCACGACTCCACCGCC
 
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JMSF021F18- ACTTTGTCTCTCAACTCCTCCACCTCTCTGTCTTTCACTCCGCAGAACTCGCCTCATTCC
                      ____________________________________________________________
consensus ACTTTGTCTCTCAACTCCTCCACCTCTCTGTCTTTCACTCCGCAGAACTCGCCTCATTCC
 
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JMSF021F18- GTCTCGCTACCCCCGTCTCTCTTCCTTCTCCTAACGACGCCGTTTCAGGAACAGGTCATT
rJMSF021F18+ GGTCATT
                      ____________________________________________________________
consensus GTCTCGCTACCCCCGTCTCTCTTCCTTCTCCTAACGACGCCGTTTCAGGAACAGGTCATT
 
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JMSF021F18- CACACCCATGAGTACAAGGCTTTCCAATACCGGATTTCCACATCTTCTTTCGAGCCCAAG
rJMSF021F18+ CACACCCATGAGTACAAGGCTTTCCAATACCGGATTTCCACATCTTCTTTCGAGCCCAAG
                      ____________________________________________________________
consensus CACACCCATGAGTACAAGGCTTTCCAATACCGGATTTCCACATCTTCTTTCGAGCCCAAG
 
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JMSF021F18- AGCCTCGATATCATCAACATTGGTCCGTATTTCCGATCTCATTACGACTCTTTCAGCCCA
rJMSF021F18+ AGCCTCGATATCATCAACATTGGTCCGTATTTCCGATCTCATTACGACTCTTTCAGCCCA
                      ____________________________________________________________
consensus AGCCTCGATATCATCAACATTGGTCCGTATTTCCGATCTCATTACGACTCTTTCAGCCCA
 
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JMSF021F18- AACTCTCCATTCCCTTCTT
rJMSF021F18+ AACTCTCCATTCCCTTCTTTGACCTGTGATTTGAGGTCCTCCAATGCAATGGTTGAGGAC
                      ____________________________________________________________
consensus AACTCTCCATTCCCTTCTTTGACCTGTGATTTGAGGTCCTCCAATGCAATGGTTGAGGAC
 
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rJMSF021F18+ GAGAATACTGAGAACTCGGCTGGTATTCAACGAGGCCTGGAAGATCAGAAGGAATTGGAT
                      ____________________________________________________________
consensus GAGAATACTGAGAACTCGGCTGGTATTCAACGAGGCCTGGAAGATCAGAAGGAATTGGAT
 
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rJMSF021F18+ ATGTGTGCCCAGGGGTTTGGAGTTGCCAGATTCAGCAAGTTAATGGGATCGAATGCCGCC
                      ____________________________________________________________
consensus ATGTGTGCCCAGGGGTTTGGAGTTGCCAGATTCAGCAAGTTAATGGGATCGAATGCCGCC
 
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rJMSF021F18+ AATTACACTGCTGAAGTAGAAGAATTGTATGATAAAATGCTTGCCAAGCTTGATAGCTTG
                      ____________________________________________________________
consensus AATTACACTGCTGAAGTAGAAGAATTGTATGATAAAATGCTTGCCAAGCTTGATAGCTTG
 
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rJMSF021F18+ GCCAGACTGGTGGAGAAGAGTTCTGCCAAAGTTCTTGAGCAGGAAAGTCATAATATGAAA
                      ____________________________________________________________
consensus GCCAGACTGGTGGAGAAGAGTTCTGCCAAAGTTCTTGAGCAGGAAAGTCATAATATGAAA
 
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rJMSF021F18+ CTGAGGTGCAAGGTTGCTGGCTTGGAATGAATTTCTTTTGTTGCTTTTGTAGTCCAATCC
                      ____________________________________________________________
consensus CTGAGGTGCAAGGTTGCTGGCTTGGAATGAATTTCTTTTGTTGCTTTTGTAGTCCAATCC
 
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rJMSF021F18+ TTGGATTTTCAAAGATCACTTGTTGGCGGAGAATGATTCGTGATCTGTCAGCATTGATGC
                      ____________________________________________________________
consensus TTGGATTTTCAAAGATCACTTGTTGGCGGAGAATGATTCGTGATCTGTCAGCATTGATGC
 
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rJMSF021F18+ CTAAGAACACATTACTACTACTGTCAACTTCATTTTGTTGTTCTCTATAGGTAGGGCATT
                      ____________________________________________________________
consensus CTAAGAACACATTACTACTACTGTCAACTTCATTTTGTTGTTCTCTATAGGTAGGGCATT
 
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rJMSF021F18+ TTTGGTTGATGTGCAATGAATCTCAATCTCCTCCTGAATGTACACTTACCTGGTCTGGTG
                      ____________________________________________________________
consensus TTTGGTTGATGTGCAATGAATCTCAATCTCCTCCTGAATGTACACTTACCTGGTCTGGTG
 
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rJMSF021F18+ TTGTTTCATTATAATGTTTTTGGTAGATGTAGATTTGCCCATTTTGTTCATATCCCCTAC
                      ____________________________________________________________
consensus TTGTTTCATTATAATGTTTTTGGTAGATGTAGATTTGCCCATTTTGTTCATATCCCCTAC
 
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rJMSF021F18+ CCCTAGTAGCTAATATGTATAATTTCTGCTCCAATCTCCATGTTGATTGTTGAGGAGGGT
                      ____________________________________________________________
consensus CCCTAGTAGCTAATATGTATAATTTCTGCTCCAATCTCCATGTTGATTGTTGAGGAGGGT