Contig 011313:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003D14Sequence570011313 (13)ref|XP_009779135.1|1e-85PREDICTED: caffeoylshikimate esterase [Nicotiana sylvestris]583011313 (13)ref|XP_009616354.1|2e-63PREDICTED: caffeoylshikimate esterase-like [Nicotiana tomentosiformis]
JMFF020D05Sequence219011313 (13)ref|XP_009611906.1|1e-09PREDICTED: caffeoylshikimate esterase [Nicotiana tomentosiformis]677011313 (13)ref|XP_011084365.1|4e-86PREDICTED: caffeoylshikimate esterase [Sesamum indicum]
JMFF033M14Sequence599011313 (13)ref|XP_009779135.1|1e-90PREDICTED: caffeoylshikimate esterase [Nicotiana sylvestris]714011313 (13)ref|XP_009616354.1|4e-87PREDICTED: caffeoylshikimate esterase-like [Nicotiana tomentosiformis]
JMFF039M01Sequence684011313 (13)ref|XP_011084365.1|6e-78PREDICTED: caffeoylshikimate esterase [Sesamum indicum]
JMSF007N17Sequence315011313 (13)ref|XP_009779135.1|2e-31PREDICTED: caffeoylshikimate esterase [Nicotiana sylvestris]174014021 (3)
JMSF008I01Sequence379011313 (13)ref|XP_009779135.1|3e-48PREDICTED: caffeoylshikimate esterase [Nicotiana sylvestris]714011313 (13)ref|XP_009616354.1|1e-91PREDICTED: caffeoylshikimate esterase-like [Nicotiana tomentosiformis]
JMSF020P04Sequence506022103742011313 (13)ref|XP_011084365.1|2e-80PREDICTED: caffeoylshikimate esterase [Sesamum indicum]
JMSF025J08Sequence682011313 (13)ref|XP_009779135.1|7e-83PREDICTED: caffeoylshikimate esterase [Nicotiana sylvestris]824011313 (13)ref|XP_009779135.1|2e-122PREDICTED: caffeoylshikimate esterase [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF020D05- AGTAATG
JMSF007N17- GAGTGAGTAATG
JMFF003D14- TGAGTAATG
JMFF033M14- TGAGTAATG
JMSF025J08- TGAGTAATG
                      ____________________________________________________________
consensus GAGTGAGTAATG
 
. : . : . : . : . : . :
JMFF020D05- AGTGTCTCCAACGAGAAACTACCAAACGTCATCTCTCCTTTCTTATATCATCTCTTTCCC
JMSF007N17- AGTGTCTCCAACGAGAAACTACCAAACGTCATCTCTCCTTTCTTATATCATCTCTTTCCC
JMFF003D14- AGTGTCTCCAACGAGAAACTACCAAACGTCATCTCTCCTTTCTTATATCATCTCTTTCCC
JMSF008I01- AACGAGAAACTACCAAACGTCATCTCTCCTTTCTTATATCATCTCTTTCCC
JMFF033M14- AGTGTCTCCAACGAGAAACTACCAAACGTCATCTCTCCTTTCTTATATCATCTCTTTCCC
JMSF025J08- AGTGTCTCCAACGAGAAACTACCAAACGTCATCTCTCCTTTCTTATATCATCTCTTTCCC
                      ____________________________________________________________
consensus AGTGTCTCCAACGAGAAACTACCAAACGTCATCTCTCCTTTCTTATATCATCTCTTTCCC
 
. : . : . : . : . : . :
JMFF020D05- TGAATTCTCATCTGTCTGTACATTCGCCGGAGATGAACCCTAGTATGAAGCATCCGGTGG
JMSF007N17- TGAATTCTCATCTGTCTGTACATTCGCCGGAGATGAACCCTAGTATGAAGCATCCGGTGG
JMFF003D14- TGAATTCTCATCTGTCTGTACATTCGCCGGAGATGAACCCTAGTATGAAGCATCCGGTGG
JMSF008I01- TGAATTCTCATCTGTCTGTACATTCGCCGGAGATGAACCCTAGTATGAAGCATCCGGTGG
JMFF033M14- TGAATTCTCATCTGTCTGTACATTCGCCGGAGATGAACCCTAGTATGAAGCATCCGGTGG
JMSF025J08- TGAATTCTCATCTGTCTGTACATTCGCCGGAGATGAACCCTAGTATGAAGCATCCGGTGG
                      ____________________________________________________________
consensus TGAATTCTCATCTGTCTGTACATTCGCCGGAGATGAACCCTAGTATGAAGCATCCGGTGG
 
. : . : . : . : . : . :
JMFF020D05- CAGAGGCGAACGAGGAGAGTCCATTTGGCTCACTGAGTGCCGACGAGTTCTACTTGCGCC
JMSF007N17- CAGAGGCGAACGAGGAGAGTCCATTTGGCTCACTGAGTGCCGACGAGTTCTACTTGCGCC
JMFF003D14- CAGAGGCGAACGAGGAGAGTCCATTTGGCTCACTGAGTGCCGACGAGTTCTACTTGCGCC
JMSF008I01- CAGAGGCGAACGAGGAGAGTCCATTTGGCTCACTGAGTGCCGACGAGTTCTACTTGCGCC
JMFF033M14- CAGAGGCGAACGAGGAGAGTCCATTTGGCTCACTGAGTGCCGACGAGTTCTACTTGCGCC
JMSF025J08- CAGAGGCGAACGAGGAGAGTCCATTTGGCTCACTGAGTGCCGACGAGTTCTACTTGCGCC
                      ____________________________________________________________
consensus CAGAGGCGAACGAGGAGAGTCCATTTGGCTCACTGAGTGCCGACGAGTTCTACTTGCGCC
 
. : . : . : . : . : . :
JMFF020D05- ACTCGGTGAGNCACGGCTCCGAGTTCGT
JMSF007N17- ACTCGGTGAGTCACGGCTCCGAGTTCGTCACCAATTCTCGCGGTCTCAAGCTGTTCACCC
JMFF003D14- ACTCGGTGAGTCACGGCTCCGAGTTCGTCACCAATTCTCGCGGTCTCAAGCTGTTCACCC
JMSF008I01- ACTCGGTGAGTCACGGCTCCGAGTTCGTCACCAATTCTCGCGGTCTCAAGCTGTTCACCC
JMFF033M14- ACTCGGTGAGTCACGGCTCCGAGTTCGTCACCAATTCTCGCGGTCTCAAGCTGTTCACCC
JMSF025J08- ACTCGGTGAGTCACGGCTCCGAGTTCGTCACCAATTCTCGCGGTCTCAAGCTGTTCACCC
                      ____________________________________________________________
consensus ACTCGGTGAGTCACGGCTCCGAGTTCGTCACCAATTCTCGCGGTCTCAAGCTGTTCACCC
 
. : . : . : . : . : . :
JMSF007N17- AGTGGTGGACCCCGCTCCCTCCGGCGAAGGTGATTGGCGCCGTCTGCGTCGTCCACGGCT
JMFF003D14- AGTGGTGGACCCCGCTCCCTCCGGCGAAGGTGATTGGCGCCGTCTGCGTCGTCCACGGCT
JMSF008I01- AGTGGTGGACCCCGCTCCCTCCGGCGAAGGTGATTGGCGCCGTCTGCGTCGTCCACGGCT
JMFF033M14- AGTGGTGGACCCCGCTCCCTCCGGCGAAGGTGATTGGCGCCGTCTGCGTCGTCCACGGCT
JMSF025J08- AGTGGTGGACCCCGCTCCCTCCGGCGAAGGTGATTGGCGCCGTCTGCGTCGTCCACGGCT
                      ____________________________________________________________
consensus AGTGGTGGACCCCGCTCCCTCCGGCGAAGGTGATTGGCGCCGTCTGCGTCGTCCACGGCT
 
. : . : . : . : . : . :
JMSF007N17- TCA
JMFF003D14- TCACCGGCGACTCCAACTGGCTGATCCAGCTCACCGCCGTGCACATCGCGAAGCAAGGGT
JMSF008I01- TCACCGGCGACTCCAACTGGCTGATCCAGCTCACCGCCGTGCACATCGCGAAGCAAGGGT
JMFF033M14- TCACCGGCGACTCCAACTGGCTGATCCAGCTCACCGCCGTGCACATCGCGAAGCAAGGGT
JMSF025J08- TCACCGGCGACTCCAACTGGC--ATCCAGCTCACCGCCGTGCACATCGCGAAGCAAGGGT
                      ____________________________________________________________
consensus TCACCGGCGACTCCAACTGGCTGATCCAGCTCACCGCCGTGCACATCGCGAAGCAAGGGT
 
. : . : . : . : . : . :
JMFF003D14- TCGCCGTCTGCGCCATCGACCACCAGGGCCACGGCTACACCGAGGGGGGGCTGAAGGCTC
JMSF008I01- TCGCCGTCTGCGCCATCGACNACCAGG
JMFF033M14- TCGCCGTCTGCGCCATCGACCACCAGGGCCACGGCTACACCGAGGGGGGGCTGAAGGCTC
JMSF025J08- TCGCCGTCTGCGCCATCGACCACCAGGGCCACGGCTACACCGAGGGGGGGCTGAAGGCTC
rJMSF025J08+ CGAGGGGGGGCTGAAGGCTC
                      ____________________________________________________________
consensus TCGCCGTCTGCGCCATCGACCACCAGGGCCACGGCTACACCGAGGGGGGGCTGAAGGCTC
 
. : . : . : . : . : . :
JMFF003D14- ACATACCGGACATAAACCCCGTCGTCGACGACTGCGTAGCGTTCTTCGACTCGTTCCGTG
JMFF033M14- ACATACCGGACATAAACCCCGTCGTCGACGACTGCGTAGCGTTCTTCGACTCGTTCCGTG
JMSF025J08- ACATACCGGACATAAACCCCGTCGTCGACGACTGCGTAGCGTTCTTCGACTCGTTCCGTG
rJMSF025J08+ ACATACCGGACATAAACCCCGTCGTCGACGACTGCGTAGCGTTCTTCGACTCGTTCCGTG
                      ____________________________________________________________
consensus ACATACCGGACATAAACCCCGTCGTCGACGACTGCGTAGCGTTCTTCGACTCGTTCCGTG
 
. : . : . : . : . : . :
JMFF003D14- ACCGCCACGTGCCGCCGGAGCTGCCTTCGTTCCTCTACGCCGAGTCTCTCGGCGGCGCGA
JMFF033M14- ACCGCCACGTGCCGCCGGAGCTGCCTTCGTTCCTCTACGCCGAGTCTCTCGGCGGCGCGA
JMSF025J08- ACCGCCACGTGCCGCCGGAGCTGCCTTCGTTCCTCTACGCCGAGTCTCTCGGCGGCGCGA
rJMSF025J08+ ACCGCCACGTGCCGCCGGAGCTGCCTTCGTTCCTCTACGCCGAGTCTCTCGGCGGCGCGA
                      ____________________________________________________________
consensus ACCGCCACGTGCCGCCGGAGCTGCCTTCGTTCCTCTACGCCGAGTCTCTCGGCGGCGCGA
 
. : . : . : . : . : . :
JMFF003D14- TTGCTCTGCTCATAACGCT
JMFF033M14- TTGCTCTGCTCATAACGCTCCGCCGCGGCGATTCCGCCCCGAAACGGC
JMSF025J08- TTGCTCTGCTCATAACGCTCCGCCGCGGCGATTCCGCCCCGAAACGGCGCTTCGACGGCG
rJMSF025J08+ TTGCTCTGCTCATAACGCTCCGCCGCGGCGATTCCGCCCCGAAACGGCGCTTCGACGGCG
rJMFF020D05+ GAAACGGCGCTTCGACGGCG
rJMSF008I01+ TTCGACGGCG
rJMFF033M14+ GCGATTCCGCCCCGAAACGGCGCTTCGACGGCG
rJMSF020P04+ CCCGAAACGGCGCTTNGACGGCG
                      ____________________________________________________________
consensus TTGCTCTGCTCATAACGCTCCGCCGCGGCGATTCCGCCCCGAAACGGCGCTTCGACGGCG
 
. : . : . : . : . : . :
JMSF025J08- TCGTTTTGAACGGGGCCATGTGCGGCATCAGCGATAAGTTCAAGCCGCCATGGCCGCTGG
rJMSF025J08+ TCGTTTTGAACGGGGCCATGTGCGGCATCAGCGATAAGTTCAAGCCGCCATGGCCGCTGG
rJMFF020D05+ TCGTTTTGAACGGGGCCATGTGCGGCATCAGCGATAAGTTCAAGCCGCCATGGCCGCTGG
rJMSF008I01+ TCGTTTTGAACGGGGCCATGTGCGGCATCAGCGATAAGTTCAAGCCGCCATGGCCGCTGG
rJMFF033M14+ TCGTTTTGAACGGGGCCATGTGCGGCATCAGCGATAAGTTCAAGCCGCCATGGCCGCTGG
rJMFF039M01+ CCATGTGCGGCATCAGCGATAAGTTCAAGCCGCCATGGCCGCTGG
rJMSF020P04+ TCG-TTTGAACGGGGCCATGTGCGGCATCAGCGATAAGTTCAAGCCGCCATGGCCGCTGG
                      ____________________________________________________________
consensus TCGTTTTGAACGGGGCCATGTGCGGCATCAGCGATAAGTTCAAGCCGCCATGGCCGCTGG
 
. : . : . : . : . : . :
JMSF025J08- AGCATTTCCTTG
rJMSF025J08+ AGCATTTCCTTGACATTGCCGCGTACTTAATCCCGACTTGGCACGTGGTCCCCACGCGCG
rJMFF020D05+ AGCATTTCCTTGACATTGCCGCGTACTTAATCCCGACTTGGCACGTGGTCCCCACGCGCG
rJMSF008I01+ AGCATTTCCTTGACATTGCCGCGTACTTAATCCCGACTTGGCACGTGGTCCCCACGCGCG
rJMFF033M14+ AGCATTTCCTTGACATTGCCGCGTACTTAATCCCGACTTGGCACGTGGTCCCCACGCGCG
rJMFF003D14+ TTGCCGCGTACTTAATCCCGACTTGGCACGTGGTCCCCACGCGCG
rJMFF039M01+ AGCATTTCCTTGACATTGCCGCGTACTTAATCCCGACTTGGCACGTGGTCCCCACGCGCG
rJMSF020P04+ AGCATTTCCTTGACATTGCCGCGTACTTAATCCCGACTTGGCACGTGGTCCCCACGCGCG
                      ____________________________________________________________
consensus AGCATTTCCTTGACATTGCCGCGTACTTAATCCCGACTTGGCACGTGGTCCCCACGCGCG
 
. : . : . : . : . : . :
rJMSF025J08+ GCTCCATTCCCGACGTCTCATTCAAGGAGGAATGGAAGAGGAAACTGGCGATAGCAAGCC
rJMFF020D05+ GCTCCATTCCCGACGTCTCATTCAAGGAGGAATGGAAGAGGAAACTGGCGATAGCAAGCC
rJMSF008I01+ GCTCCATTCCCGACGTCTCATTCAAGGAGGAATGGAAGAGGAAACTGGCGATAGCAAGCC
rJMFF033M14+ GCTCCATTCCCGACGTCTCATTCAAGGAGGAATGGAAGAGGAAACTGGCGATAGCAAGCC
rJMFF003D14+ GCTCCATTCCCGACGTNTCATTCAAGGAGGAATGGAAGAGGAAACTGGCGATAGCAAGCC
rJMFF039M01+ GCTCCATTCCCGACGTCTCATTCAAGGAGGAATGGAAGAGGAAACTGGCGATAGCAAGCC
rJMSF020P04+ GCTCCATTCCCGACGTCTCATTCAAGGAGGAATGGAAGAGGAAACTGGCGATAGCAAGCC
                      ____________________________________________________________
consensus GCTCCATTCCCGACGTCTCATTCAAGGAGGAATGGAAGAGGAAACTGGCGATAGCAAGCC
 
. : . : . : . : . : . :
rJMSF025J08+ CCACTAGGACCATGGCGAGGCCGCGAGCAGCGACGGCGCGTGAGCTGTTGAGGGTGTGCA
rJMFF020D05+ CCACTAGGACCATGGCGAGGCCGCGAGCAGCGACGGCGCGTGAGCTGTTGAGGGTGTGCA
rJMSF008I01+ CCACTAGGACCATGGCGAGGCCGCGAGCAGCGACGGCGCGTGAGCTGTTGAGGGTGTGCA
rJMFF033M14+ CCACTAGGACCATGGCGAGGCCGCGAGCAGCGACGGCGCGTGAGCTGTTGAGGGTGTGCA
rJMFF003D14+ CCACTAGGACCATGGCGAGGCCGCGAGCAGCGACGGCGCGTGAGCTGTTGAGGGTGTGCA
rJMFF039M01+ CCACTAGGACCATGGCGAGGCCGCGAGCAGCGACGGCGCGTGAGCTGTTGAGGGTGTGCA
rJMSF020P04+ CCACTAGGACCATGGCGAGGCCGCGAGCAGCGACGGCGCGTGAGCTGTTGAGGGTGTGCA
                      ____________________________________________________________
consensus CCACTAGGACCATGGCGAGGCCGCGAGCAGCGACGGCGCGTGAGCTGTTGAGGGTGTGCA
 
. : . : . : . : . : . :
rJMSF025J08+ GGGATCTGCAAGCGAGGTTCGAAGAAGTGGAAGTCCCGTTCCTGATCATTCACGGCGGGG
rJMFF020D05+ GGGATCTGCAAGCGAGGTTCGAAGAAGTGGAAGTCCCGTTCCTGATCATTCACGGCGGGG
rJMSF008I01+ GGGATCTGCAAGCGAGGTTCGAAGAAGTGGAAGTCCCGTTCCTGATCATTCACGGCGGGG
rJMFF033M14+ GGGATCTGCAAGCGAGGTTCGAAGAAGTGGAAGTCCCGTTCCTGATCATTCACGGCGGGG
rJMFF003D14+ GGGATCTGCAAGCGAGGTTCGAAGAAGTGGAAGTCCCGTTCCTGATCATTCACGGCGGGG
rJMFF039M01+ GGGATCTGCAAGCGAGGTTCGAAGAAGTGGAAGTCCCGTTCCTGATCATTCACGGCGGGG
rJMSF020P04+ GGGATCTGCAAGCGAGGTTCGAAGAAGTGGAAGTCCCGTTCCTGATCATTCACGGCGGGG
                      ____________________________________________________________
consensus GGGATCTGCAAGCGAGGTTCGAAGAAGTGGAAGTCCCGTTCCTGATCATTCACGGCGGGG
 
. : . : . : . : . : . :
rJMSF025J08+ AAGACGTCGTCTGCGACCCGGCGTGCGTGGAAGAGCTGTACCGACGCGCCGCCAGCAAGG
rJMFF020D05+ AAGACGTCGTCTGCGACCCGGCGTGCGTGGAAGAGCTGTACCGACGCGCCGCCAGCAAGG
rJMSF008I01+ AAGACGTCGTCTGCGACCCGGCGTGCGTGGAAGAGCTGTACCGACGCGCCGCCAGCAAGG
rJMFF033M14+ AAGACGTCGTCTGCGACCCGGCGTGCGTGGAAGAGCTGTACCGACGCGCCGCCAGCAAGG
rJMFF003D14+ AAGACGTCGTCTGCGACCCGGCGTGCGTGGAAGAGCTGTACCGACGCGCCGCCAGCAAGG
rJMFF039M01+ AAGACGTCGTCTGCGACCCGGCGTGCGTGGAAGAGCTGTACCGACGCGCCGCCAGCAAGG
rJMSF020P04+ AAGACGTCGTCTGCGACCCGGCGTGCGTGGAAGAGCTGTACCGACGCGCCGCCAGCAAGG
                      ____________________________________________________________
consensus AAGACGTCGTCTGCGACCCGGCGTGCGTGGAAGAGCTGTACCGACGCGCCGCCAGCAAGG
 
. : . : . : . : . : . :
rJMSF025J08+ ACAAGACTCTGAATATATATCCCGGAATGTGGCACCAACTGGTGGGCGAGCCGGAGGAGA
rJMFF020D05+ ACAAGACTCTGAATATATATCCCGGAATGTGGCACCAACTGGTGGGCGAGCCGGAGGAGA
rJMSF008I01+ ACAAGACTCTGAATATATATCCCGGAATGTGGCACCAACTGGTGGGCGAGCCGGAGGAGA
rJMFF033M14+ ACAAGACTCTGAATATATATCCCGGAATGTGGCACCAACTGGTGGGCGAGCCGGAGGAGA
rJMFF003D14+ ACAAGACTCTGAATATATATCCCGGAATGTGGCACCAACTGGTGGGCGAGCCGGAGGAGA
rJMFF039M01+ ACAAGACTCTGAATATATATCCCGGAATGTGGCACCAACTGGTGGGCGAGCCGGAGGAGA
rJMSF020P04+ ACAAGACTCTGAATATATATCCCGGAATGTGGCACCAACTGGTGGGCGAGCCGGAGGAGA
                      ____________________________________________________________
consensus ACAAGACTCTGAATATATATCCCGGAATGTGGCACCAACTGGTGGGCGAGCCGGAGGAGA
 
. : . : . : . : . : . :
rJMSF025J08+ ACGTGGAGCGCGTGTTTGGAGACGTTATACAGTGGCTCAGAACCAGAGCCGGAAACCCCA
rJMFF020D05+ ACGTGGAGCGCGTGTTTGGAGACGTTATACAGTGGCTCAGAACCAGAGCCGGAAACCCCA
rJMSF008I01+ ACGTGGAGCGCGTGTTTGGAGACGTTATACAGTGGCTCAGAACCAGAGCCGGAAACCCCA
rJMFF033M14+ ACGTGGAGCGCGTGTTTGGAGACGTTATACAGTGGCTCAGAACCAGAGCCGGAAACCCCA
rJMFF003D14+ ACGTGGAGCGCGTGTTTGGAGACGTTATACAGTGGCTCAGAACCAGAGCCGGAAACCCCA
rJMFF039M01+ ACGTGGAGCGCGTGTTTGGAGACGTTATACAGTGGCTCAGAACCAGAGCCGGAAACCCCA
rJMSF020P04+ ACGTGGAGCGCGTGTTTGGAGACGTTATACAGTGGCTCAGAACCAGAGCCGGAAACCCCA
                      ____________________________________________________________
consensus ACGTGGAGCGCGTGTTTGGAGACGTTATACAGTGGCTCAGAACCAGAGCCGGAAACCCCA
 
. : . : . : . : . : . :
rJMSF025J08+ CCAGTTAACACACACGCCGCCGTGCTCCGCCGGCGGAGCATATGGCGCAATTAAATGGAA
rJMFF020D05+ CCAGTTAACACACACGCCGCCGTGCTCCGCCGGCGGAGCATATGGCGCAATTAAATGGAA
rJMSF008I01+ CCAGTTAACACACACGCCGCCGTGCTCCGCCGGCGGAGCATATGGCGCAATTAAATGGAA
rJMFF033M14+ CCAGTTAACACACACGCCGCCGTGCTCCGCCGGCGGAGCATATGGCGCAATTAAATGGAA
rJMFF003D14+ CCAGTTAACACACACGCCGCCGTGCTCCGCCGGCGGAGCATATGGCGCAATTAAATGGAA
rJMFF039M01+ CCAGTTAACACACACGCCGCCGTGCTCCGCCGGCGGAGCATATGGCGCAATTAAATGGAA
rJMSF020P04+ CCAGTTAACACACACGCCGCCGTGCTCCGCCGGCGGAGCATATGGCGCAATTAAATGGAA
                      ____________________________________________________________
consensus CCAGTTAACACACACGCCGCCGTGCTCCGCCGGCGGAGCATATGGCGCAATTAAATGGAA
 
. : . : . : . : . : . :
rJMSF025J08+ GTTGGGGGTAATTAGTTGGGCAGTATTGAATAAAGTGGATGGTAGTTGGGAGTCTTTTAG
rJMFF020D05+ GTTGGGGGTAATTAGTTGGGCAGTATTGAATAAAGTGGATGGTAGTTGGGAGTCTTTTAG
rJMSF008I01+ GTTGGGGGTAATTAGTTGGGCAGTATTGAATAAAGTGGATGGTAGTTGGGAGTCTTTTAG
rJMFF033M14+ GTTGGGGGTAATTAGTTGGGCAGTATTGAATAAAGTGGATGGTAGTTGGGAGTCTTTTAG
rJMFF003D14+ GTTGGGGGTAATTAGTTGGGCAGTATTGAATAAAGTGGATGGTAGTTGGGAGTCTTTTAG
rJMFF039M01+ GTTGGGGGTAATTAGTTGGGCAGTATTGAATAAAGTGGATGGTAGTTGGGAGTCTTTTAG
rJMSF020P04+ GTTGGGGGTAATTAGTTGGGCAGTATTGAATAAAGTGGATGGTAGTTGGGAGTCTTTTAG
                      ____________________________________________________________
consensus GTTGGGGGTAATTAGTTGGGCAGTATTGAATAAAGTGGATGGTAGTTGGGAGTCTTTTAG
 
. : . : . : . : . : . :
rJMSF025J08+ TTACGACTTTCCTTTTTAACTCTT
rJMFF020D05+ TTACGACTTTCCTTTTTAACTCTTTTATATTATAATATAATTTGTATGGACTACTCC
rJMSF008I01+ TTACGACTTTCCTTTTTAACTCTTTTATATTATAATATAATTTGTATGGACTACTCCCCA
rJMFF033M14+ TTACGACTTTCCTTTTTAACTCTTTTATATTATAATATAATTTGTATGGACTACTCCCCA
rJMFF003D14+ TTACGACTTTCCTTTTTAACTCTTTTATATTATAATATAATTTGTATGGACTACTCCC
rJMFF039M01+ TTACGACTTTCCTTTTTAACTCTTTTATATTATAATATAATTTGTATGGACTACTCCCCA
rJMSF020P04+ TTACGACTTTCCTTTTTAACTCTTTTATATTATAATATAATTTGTATGGACTACTCCCCA
                      ____________________________________________________________
consensus TTACGACTTTCCTTTTTAACTCTTTTATATTATAATATAATTTGTATGGACTACTCCCCA
 
. : . : . : . : . : . :
rJMSF008I01+ TT
rJMFF033M14+ TTAATCTCCATTTAACAAGT
rJMFF039M01+ TTAATCTCCATTTAACAAGT
rJMSF020P04+ TTAATCTCCATTTAACAAGTGTTAATGCGCCAAGTCTGTTCAGATTACCATATAGTGATT
                      ____________________________________________________________
consensus TTAATCTCCATTTAACAAGTGTTAATGCGCCAAGTCTGTTCAGATTACCATATAGTGATT