Contig 011301:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019F14Sequence338011301 (2)
JMSF045P09Sequence354011301 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF045P09+ CCCCNACCNTGGCCTTCCACCTTAAGGAAAAAAAAAAAAGGAAAACTTAGATTA
rJMSF019F14+ AAAAAAAAAAAAGGAAAACTTAGATTA
                      ____________________________________________________________
consensus CCCCNACCNTGGCCTTCCACCTTAAGGAAAAAAAAAAAAGGAAAACTTAGATTA
 
. : . : . : . : . : . :
rJMSF045P09+ ACTCAATATCAGCTAAAAGTTCAATTGCTAAGATTATTGTACTTTCTAAGACTTGACCAG
rJMSF019F14+ ACTCAATATCAGCTAAAAGTTCAATTGCTAAGATTATTGTACTTTCTAAGACTTGACCAG
                      ____________________________________________________________
consensus ACTCAATATCAGCTAAAAGTTCAATTGCTAAGATTATTGTACTTTCTAAGACTTGACCAG
 
. : . : . : . : . : . :
rJMSF045P09+ AACATAAAATATAGGACTGTTTTGGAAAATACATACAAGAATATTTTGAATTCTAACCAA
rJMSF019F14+ AACATAAAATATAGGACTGTTTTGGAAAATACATACAAGAATATTTTGAATTCTAACCAA
                      ____________________________________________________________
consensus AACATAAAATATAGGACTGTTTTGGAAAATACATACAAGAATATTTTGAATTCTAACCAA
 
. : . : . : . : . : . :
rJMSF045P09+ GGACTGCAAATTAAAGTCAAAGCAAAATAGGGGTATAAGGACTTCAACATTTGTTAAAAA
rJMSF019F14+ GGACTGCAAATTAAAGTCAAAGCAAAATAGGGGTATAAGGACTTCAACATTTGTTAAAAA
                      ____________________________________________________________
consensus GGACTGCAAATTAAAGTCAAAGCAAAATAGGGGTATAAGGACTTCAACATTTGTTAAAAA
 
. : . : . : . : . : . :
rJMSF045P09+ ATTTGAGCTATAGCATGGTAGTATATGCAAATTAACCTTACAAGTCATTACACATTTTTC
rJMSF019F14+ ATTTGAGCTATAGCATGGTAGTATATGCAAATTAACCTTACAAGTCATTACACATTTTTC
                      ____________________________________________________________
consensus ATTTGAGCTATAGCATGGTAGTATATGCAAATTAACCTTACAAGTCATTACACATTTTTC
 
. : . : . : . : . : . :
rJMSF045P09+ TATCAATATACTATTCTGACACAATGCCATGGTACNTGCTGTAGAGTTACAAAACAGAAT
rJMSF019F14+ TATCAATATACTATTCTGACACAATGCCATGGTACATGCTGTAGAGTTACAAAACAGAAT
                      ____________________________________________________________
consensus TATCAATATACTATTCTGACACAATGCCATGGTACATGCTGTAGAGTTACAAAACAGAAT