Contig 011299:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN029N11Sequence616011299 (3)ref|XP_011095181.1|270PREDICTED: uncharacterized protein LOC105174696 [Sesamum indicum]
JMSF018B17Sequence231005043 (2)770011299 (3)ref|XP_009772093.1|333PREDICTED: uncharacterized protein LOC104222551 [Nicotiana sylvestris]
JMSF032J24Sequence706005043 (2)ref|XP_009589511.1|236PREDICTED: uncharacterized protein LOC104086873 [Nicotiana tomentosiformis]663011299 (3)gb|EYU42061.1|1e-95hypothetical protein MIMGU_mgv1a006990mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN029N11- GAATATTGGAAATGAACCA
                      ____________________________________________________________
consensus GAATATTGGAAATGAACCA
 
. : . : . : . : . : . :
JMFN029N11- CTTGTTCTCATTGCAGCATTATGCCGTGATAAATCAAATCCTTTCGGTGACTCTAATAAG
                      ____________________________________________________________
consensus CTTGTTCTCATTGCAGCATTATGCCGTGATAAATCAAATCCTTTCGGTGACTCTAATAAG
 
. : . : . : . : . : . :
JMFN029N11- TGCTCTCAAGATGGAAATGCATACATCTCATTTGGTCAATGGGTTGGTGCAATTGTCCTG
                      ____________________________________________________________
consensus TGCTCTCAAGATGGAAATGCATACATCTCATTTGGTCAATGGGTTGGTGCAATTGTCCTG
 
. : . : . : . : . : . :
JMFN029N11- TACACCTACGTATTCAATATGCTTGCACCTCCTCCTGAAGGTACCTTTGACATTGAAGAT
                      ____________________________________________________________
consensus TACACCTACGTATTCAATATGCTTGCACCTCCTCCTGAAGGTACCTTTGACATTGAAGAT
 
. : . : . : . : . : . :
JMFN029N11- GGTGGCCACCTTCCAATGAAGGCTCCTAATAGAGATAGCTCCCATGCTGCTGCAAAGGAT
rJMSF018B17+ TTCCAATGAAGGCTCCTAATAGAGATAGCTCCCATGCTGCTGCAAAGGAT
                      ____________________________________________________________
consensus GGTGGCCACCTTCCAATGAAGGCTCCTAATAGAGATAGCTCCCATGCTGCTGCAAAGGAT
 
. : . : . : . : . : . :
JMFN029N11- AGCTCCCCTGAGCAAATTCCATTGCTTGCACAGGAGCCTGCAGTTCCTGTGTCAACTAGT
rJMSF032J24+ TAGT
rJMSF018B17+ AGCTCCCCTGAGCAAATTCCATTGCTTGCACAGGAGCCTGCAGTTCCTGTGTCAACTAGT
                      ____________________________________________________________
consensus AGCTCCCCTGAGCAAATTCCATTGCTTGCACAGGAGCCTGCAGTTCCTGTGTCAACTAGT
 
. : . : . : . : . : . :
JMFN029N11- TCACAGAAAAATAAGATTAAGGAGTTCTTCAAGTTTCTGTATGAAAAATTGAAGCTCAAG
rJMSF032J24+ TCACAGAAAAATAAGATTANGGAGTTCTTCAAGNTTNTGTATGAAAAATTGAAGCTCAAG
rJMSF018B17+ TCACAGAAAAATAAGATTAAGGAGTTCTTCAAGTTTCTGTATGAAAAATTGAAGCTCAAG
                      ____________________________________________________________
consensus TCACAGAAAAATAAGATTAAGGAGTTCTTCAAGTTTCTGTATGAAAAATTGAAGCTCAAG
 
. : . : . : . : . : . :
JMFN029N11- CAAATCATTCAACCCCCCATAATTGCTTCGGTTCTTGCCATTTTCCTAGGATGCGTTCCA
rJMSF032J24+ CAAATCATTCAACCCCCCATAATTGCTTCGGTTCTTGCCATTTTCCTAGGATGCGTTCCA
rJMSF018B17+ CAAATCATTCAACCCCCCATAATTGCTTCGGTTCTTGCCATTTTCCTAGGATGCGTTCCA
                      ____________________________________________________________
consensus CAAATCATTCAACCCCCCATAATTGCTTCGGTTCTTGCCATTTTCCTAGGATGCGTTCCA
 
. : . : . : . : . : . :
JMFN029N11- TTCTTCAAGAAACTGATCTTCACTTCAGATGCTCCATTTTACTTCTTCACTGACAGCTGC
rJMSF032J24+ TTNTTCAAGAAACTGATCTTCACTTCAGATGCTCCATTTTACTTCTTCACTGACAGCTGC
rJMSF018B17+ TTCTTCAAGAAACTGATCTTCACTTCAGATGCTCCATTTTACTTCTTCACTGACAGCTGC
                      ____________________________________________________________
consensus TTCTTCAAGAAACTGATCTTCACTTCAGATGCTCCATTTTACTTCTTCACTGACAGCTGC
 
. : . : . : . : . : . :
JMFN029N11- ATGATTCTTGGGGAGGCCATGATTCCCTGCATATTGTTGGCATTAGGAGGCAATCTTGTT
rJMSF032J24+ ATGATTCTTGGGGAGGCCATGATTCCCTGCATATTGTTGGCATTAGGAGGCAATCTTGTT
rJMSF018B17+ ATGATTCTTGGGGAGGCCATGATTCCCTGCATATTGTTGGCATTAGGAGGCAATCTTGTT
                      ____________________________________________________________
consensus ATGATTCTTGGGGAGGCCATGATTCCCTGCATATTGTTGGCATTAGGAGGCAATCTTGTT
 
. : . : . : . : . : . :
JMFN029N11- CAAGGTCCAGGAAGTTC-AAACTTGGTTTACGGACAACTGCTGCAATCATATTTGGTC
rJMSF032J24+ CAAGGTCCAGGAAGTTCAAAACTTGGTTTACGGACAACTGCTGCAATCATATTTGGTCGG
rJMSF018B17+ CAAGGTCCAGGAAGTTCAAAACTTGGTTTACGGACAACTGCTGCAATCATATTTGGTCGG
                      ____________________________________________________________
consensus CAAGGTCCAGGAAGTTCAAAACTTGGTTTACGGACAACTGCTGCAATCATATTTGGTCGG
 
. : . : . : . : . : . :
rJMSF032J24+ CTGGTTTTAGTTCCTCCAACTGGACTTGGAATCGTCATGTTGGNTGATAAACTCGGCTTC
rJMSF018B17+ CTGGTTTTAGTTCCTCCAACTGGACTTGGAATCGTCATGTTGGCTGATAAACTCGGCTTC
                      ____________________________________________________________
consensus CTGGTTTTAGTTCCTCCAACTGGACTTGGAATCGTCATGTTGGCTGATAAACTCGGCTTC
 
. : . : . : . : . : . :
rJMSF032J24+ CTTCCTGCCGGTGACAAGATGTTCAGATTCGTCCTCCTCCTCCAGCATACAATGCCCACA
rJMSF018B17+ CTTCCTGCCGGTGACAAGATGTTCAGATTCGTCCTCCTCCTCCAGCATACAATGCCCACA
                      ____________________________________________________________
consensus CTTCCTGCCGGTGACAAGATGTTCAGATTCGTCCTCCTCCTCCAGCATACAATGCCCACA
 
. : . : . : . : . : . :
rJMSF032J24+ TCCGTGCTTTCCGGTGCGGTTGCAAATTTGAGAGGGTGTGGGAGGGAGGCAGCTGCTGTC
rJMSF018B17+ TCCGTGCTTTCCGGTGCGGTTGCAAATTTGAGAGGGTGTGGGAGGGAGGCAGCTGCTGTC
                      ____________________________________________________________
consensus TCCGTGCTTTCCGGTGCGGTTGCAAATTTGAGAGGGTGTGGGAGGGAGGCAGCTGCTGTC
 
. : . : . : . : . : . :
rJMSF032J24+ CTGTTTTGGGTTCATATCTTTGCTATTTTCTCAATGGCCGGTTGGATTATCCTGTATCTC
rJMSF018B17+ CTGTTTTGGGTTCATATCTTTGCTATTTTCTCAATGGCCGGTTGGATTATCCTGTATCTC
                      ____________________________________________________________
consensus CTGTTTTGGGTTCATATCTTTGCTATTTTCTCAATGGCCGGTTGGATTATCCTGTATCTC
 
. : . : . : . : . : . :
rJMSF032J24+ AACATATTGTTTTAAGTTTGNACGTAGTTTTGCCAGGAAAATTACCATGCCCAGTGATCA
rJMSF018B17+ AACATATTGTTTTAAGTTTGTACGTAGTTTTGCCAGGAAAATTACCATGCCCAGTGATCA
                      ____________________________________________________________
consensus AACATATTGTTTTAAGTTTGTACGTAGTTTTGCCAGGAAAATTACCATGCCCAGTGATCA
 
. : . : . : . : . : . :
rJMSF032J24+ CTTGTTTATAGAGTAAGCATTATTGCGAGTATCGTTTTCCATAATACATACTNTGAAAT
rJMSF018B17+ CTTGTTTATAGAGTAAGCATTATTGCGAGTATCGTTTTCCATAATACATACTTTGAAATA
                      ____________________________________________________________
consensus CTTGTTTATAGAGTAAGCATTATTGCGAGTATCGTTTTCCATAATACATACTTTGAAATA