Contig 011282:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013M18Sequence472006445 (2)ref|XP_009780558.1|2e-36PREDICTED: uncharacterized protein LOC104229598 isoform X2 [Nicotiana sylvestri726011282 (2)gb|KDO80850.1|3e-74hypothetical protein CISIN_1g011723mg [Citrus sinensis]
JMSF052N06Sequence659006445 (2)ref|XP_009616109.1|2e-82PREDICTED: uncharacterized protein LOC104108712 isoform X3 [Nicotiana tomentosi933011282 (2)gb|KCW58228.1|9e-136hypothetical protein EUGRSUZ_H00930 [Eucalyptus grandis]

Alignment

This contig is upended


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rJMSF052N06+                                      TAANGTATGTGCTCCTGCACTTCATAACTCAG
                      ____________________________________________________________
consensus                                         TAANGTATGTGCTCCTGCACTTCATAACTCAG
 
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rJMSF052N06+          GATTTGCGGGTTCATGNTCTCGAATATGGCAGCGAGATTCTTATTGGGATGCACGCCCAT
                      ____________________________________________________________
consensus             GATTTGCGGGTTCATGNTCTCGAATATGGCAGCGAGATTCTTATTGGGATGCACGCCCAT
 
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rJMSF052N06+          CGTCTAGAAGTGGTGAATACCCTCTTTTTATTCCTCGCCAAAATTTTTGCTCTACTGGTG
                      ____________________________________________________________
consensus             CGTCTAGAAGTGGTGAATACCCTCTTTTTATTCCTCGCCAAAATTTTTGCTCTACTGGTG
 
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rJMSF052N06+          GAGAAACTTCGTGGTCTGAAAAAAGCTCAAGTAACTTTGGTGTGGCTTCTATGGAGTCTG
                      ____________________________________________________________
consensus             GAGAAACTTCGTGGTCTGAAAAAAGCTCAAGTAACTTTGGTGTGGCTTCTATGGAGTCTG
 
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rJMSF052N06+          ATAGGAAGGCTCGCTTGGATTCTTCTGGTAGCAGCAGTTTCAATTATTCTTCTGCTTCAC
                      ____________________________________________________________
consensus             ATAGGAAGGCTCGCTTGGATTCTTCTGGTAGCAGCAGTTTCAATTATTCTTCTGCTTCAC
 
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rJMSF052N06+          CACACTCACTTGAAACACACAAGGAGTTACAGAAAGGGATAGCACTTCTCAAGAAAAGTG
rJMSF013M18+                                                                AAAGTG
                      ____________________________________________________________
consensus             CACACTCACTTGAAACACACAAGGAGTTACAGAAAGGGATAGCACTTCTCAAGAAAAGTG
 
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rJMSF052N06+          TTGCTTGCGCAACAACATACTGTTATAACATATTATGCCTAGACGTTCCTGCAGAGGCTT
rJMSF013M18+          GTGCTTGCGCAACAACATACTGTTATAACATATTATGCCTAGACGTTCCTGCAGAGGCTT
                      ____________________________________________________________
consensus             TTGCTTGCGCAACAACATACTGTTATAACATATTATGCCTAGACGTTCCTGCAGAGGCTT
 
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rJMSF052N06+          CTACTTTTGAAGCATTTGCAAGGTTGTTGACTACCCTTTCTTCTTCCAAGGAAGTCCGAT
rJMSF013M18+          CTACTTTTGAAGCATTTGCAAGGTTGTTGATTACCCTTTCTTCTTCCAAGGAAGTCCGAT
                      ____________________________________________________________
consensus             CTACTTTTGAAGCATTTGCAAGGTTGTTGATTACCCTTTCTTCTTCCAAGGAAGTCCGAT
 
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rJMSF052N06+          CTGTATTTTCTTTAAAAATGGCTTGTTCAGGGTCATCCAAGCAAGTCCAACAATTCAGCA
rJMSF013M18+          CTGTATTTTCTTTAAAAATGGCTTGTTCAGGGTCATCCAAGCAAGTCCAACAATTCAGCA
                      ____________________________________________________________
consensus             CTGTATTTTCTTTAAAAATGGCTTGTTCAGGGTCATCCAAGCAAGTCCAACAATTCAGCA
 
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rJMSF052N06+          GATCTGTGTGGGATGTAAATTCATTAGTTTCCTCAAGTGCTATGATAGAAAGTGTGCATG
rJMSF013M18+          GATCTGTGTGGGATGTAAATTCATTAGTTTCCTCAAGTGCTATGATAGAAAGTGTGCATG
                      ____________________________________________________________
consensus             GATCTGTGTGGGATGTAAATTCATTAGTTTCCTCAAGTGCTATGATAGAAAGTGTGCATG
 
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rJMSF052N06+          CGTTGCAAGCACAAAGAAACATATTTGACCATAATCTTCCAAGTTCTACAGCCAGTTTGC
rJMSF013M18+          CGTTGCAAGCACAAAGAAACATATTTGACCATAATCTTCCAAGTTCTACAGCCAGTTTGC
                      ____________________________________________________________
consensus             CGTTGCAAGCACAAAGAAACATATTTGACCATAATCTTCCAAGTTCTACAGCCAGTTTGC
 
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rJMSF052N06+          TTTACGCCAATGAAATATCCGACCTAGGAAGGAATGAAAATTTAATCGAGGGTTGGGATC
rJMSF013M18+          TTTACGCCAATGAAATATCCGACCTAGGAAGGAATGAAAATTTAATCGAGGGTTGGGATC
                      ____________________________________________________________
consensus             TTTACGCCAATGAAATATCCGACCTAGGAAGGAATGAAAATTTAATCGAGGGTTGGGATC
 
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rJMSF052N06+          TAATCGAGCACCCCACTTTTCCTCCTCCGCCTTCACAAACCGAAGATGTTGAGCATTGGA
rJMSF013M18+          TAATCGAGCACCCCACTTTTCCTCCTCCGCCTTCACAAACCGAAGATGTTGAGCATTGGA
                      ____________________________________________________________
consensus             TAATCGAGCACCCCACTTTTCCTCCTCCGCCTTCACAAACCGAAGATGTTGAGCATTGGA
 
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rJMSF052N06+          CTCGGGCCATGTTCATTGATGCAACGAAAAAGTGACTTCATAGCTTCATCGCTGACTGCC
rJMSF013M18+          CTCGGGCCATGTTCATTGATGCAACGAAAAAGTGACTTCATAGCTTCATCGCTGACTGCC
                      ____________________________________________________________
consensus             CTCGGGCCATGTTCATTGATGCAACGAAAAAGTGACTTCATAGCTTCATCGCTGACTGCC
 
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rJMSF052N06+          CTTCAATTCCTGTAAATACAAGTAGTCCAGTGCACATAGAAGAAGCCGCATATCTCCTTC
rJMSF013M18+          CTTCAATTCCTGTAAATACAAGTAGTCCAGTGCACATAGAAGAAGCCGCATATCTCCTTC
                      ____________________________________________________________
consensus             CTTCAATTCCTGTAAATACAAGTAGTCCAGTGCACATAGAAGAAGCCGCATATCTCCTTC
 
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rJMSF052N06+          CGTGCATTAAATGTATCCTAGTATTCAGTTTCTTTATGCTTTGGTTTTTCTCTCTGTGAT
rJMSF013M18+          CGTGCATTAAATGTATCCTAGTATTCAGTTTCTTTATGCTTTGGTTTTTCTCTCTGTGAT
                      ____________________________________________________________
consensus             CGTGCATTAAATGTATCCTAGTATTCAGTTTCTTTATGCTTTGGTTTTTCTCTCTGTGAT
 
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rJMSF052N06+          T                                                           
rJMSF013M18+          TTACAATGTTGAACAGGAAAATGTATATTTGTCTGTGTTTCCCGTTCAAGACTGAAGAAA
                      ____________________________________________________________
consensus             TTACAATGTTGAACAGGAAAATGTATATTTGTCTGTGTTTCCCGTTCAAGACTGAAGAAA
 
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rJMSF013M18+          TCCTTTTATAATTGCTTTTGACCATATATTTTATTACAAAACTAAAAGTGGGGAGGCCCG
                      ____________________________________________________________
consensus             TCCTTTTATAATTGCTTTTGACCATATATTTTATTACAAAACTAAAAGTGGGGAGGCCCG