Contig 011278:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS133C08Sequence626011278 (2)ref|XP_011085014.1|1e-49PREDICTED: wall-associated receptor kinase-like 20 [Sesamum indicum]
JMSF012O05Sequence451017781ref|XP_009772309.1|9e-24PREDICTED: glutamate receptor 3.6-like, partial [Nicotiana sylvestris]816011278 (2)ref|XP_008242064.1|2e-46PREDICTED: glutamate receptor 3.6-like [Prunus mume]

Alignment

This contig is upended


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JMFS133C08+               AACTATCAGCTCACCGACAAGAGTGATGTCTACAGCTTCGGGGTCGTGCTGCTAGA
                      ____________________________________________________________
consensus                 AACTATCAGCTCACCGACAAGAGTGATGTCTACAGCTTCGGGGTCGTGCTGCTAGA
 
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JMFS133C08+           GCTCCTGACGTCCCAGAAAGCAATAGACTTTAACAGAGACCAAGACGACGTAAACTTGGC
                      ____________________________________________________________
consensus             GCTCCTGACGTCCCAGAAAGCAATAGACTTTAACAGAGACCAAGACGACGTAAACTTGGC
 
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JMFS133C08+           AGTTTACGTGCAAAGGCTGGTCGAGGAGGAAAGAATAATGGACGCTGTAGATCCCGTGTT
                      ____________________________________________________________
consensus             AGTTTACGTGCAAAGGCTGGTCGAGGAGGAAAGAATAATGGACGCTGTAGATCCCGTGTT
 
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JMFS133C08+           GAAGGAAGGCGCAAGCAACTTGGAGCTGGAGACTATGAAGGCACTAGGGTTCCTGGCAAC
                      ____________________________________________________________
consensus             GAAGGAAGGCGCAAGCAACTTGGAGCTGGAGACTATGAAGGCACTAGGGTTCCTGGCAAC
 
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JMFS133C08+           CGGGTGCTTGGAGGAGCGCCGACAAAACAGGCCTTCCATGAAAGAAGTGGTCGAGGAAAT
                      ____________________________________________________________
consensus             CGGGTGCTTGGAGGAGCGCCGACAAAACAGGCCTTCCATGAAAGAAGTGGTCGAGGAAAT
 
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JMFS133C08+           CGAGTATATAATTAGTATAGCAATGGCAAAGGATGAGAAGTAAGCAGCAATGCAGAAATT
                      ____________________________________________________________
consensus             CGAGTATATAATTAGTATAGCAATGGCAAAGGATGAGAAGTAAGCAGCAATGCAGAAATT
 
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JMFS133C08+           AAAGTATTTAGGATTGTGTGTTTGTATGTGTGTTTTGCTTTGTTTCCCAACCCGACATAC
                      ____________________________________________________________
consensus             AAAGTATTTAGGATTGTGTGTTTGTATGTGTGTTTTGCTTTGTTTCCCAACCCGACATAC
 
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JMFS133C08+           TATTTCCTAGTTGATCAGATGTTACTGTCTTTTTTAGTACTACTGACTCTGTTACAATGC
rJMSF012O05+                                                       ACTCTGTTACAATGC
                      ____________________________________________________________
consensus             TATTTCCTAGTTGATCAGATGTTACTGTCTTTTTTAGTACTACTGACTCTGTTACAATGC
 
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JMFS133C08+           AGTATCTGTTCATAACGACTTTCTCAAAGTACTGAAGCACAAAGAGTCA           
rJMSF012O05+          AGTATCTGTTCATAACTACTTTCTCAACCTACTGAAGCACAAAGAGTCAGTCAATACTAC
                      ____________________________________________________________
consensus             AGTATCTGTTCATAACTACTTTCTCAACGTACTGAAGCACAAAGAGTCAGTCAATACTAC
 
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rJMSF012O05+          TGACTCTGTTAGAATAACTTGGTGCTACTAGACCACAAGGTCATTGGCGACTGGAAACAC
                      ____________________________________________________________
consensus             TGACTCTGTTAGAATAACTTGGTGCTACTAGACCACAAGGTCATTGGCGACTGGAAACAC
 
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rJMSF012O05+          TTTGAGCATGCCATATTACACACATATGATTTAAGTTTTTGTTTCTTTAACACTAGGCCT
                      ____________________________________________________________
consensus             TTTGAGCATGCCATATTACACACATATGATTTAAGTTTTTGTTTCTTTAACACTAGGCCT
 
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rJMSF012O05+          TCCCGAAGGACTCTCCTCTGGCGGTTGACATGTCAACCGCGATTCTGAAATTGTCAGAAG
                      ____________________________________________________________
consensus             TCCCGAAGGACTCTCCTCTGGCGGTTGACATGTCAACCGCGATTCTGAAATTGTCAGAAG
 
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rJMSF012O05+          ACGGGGAGCTCCAAAGAATTCATGACAAATGGCTGCTGAGGAGCGCTTGCACATCACAGA
                      ____________________________________________________________
consensus             ACGGGGAGCTCCAAAGAATTCATGACAAATGGCTGCTGAGGAGCGCTTGCACATCACAGA
 
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rJMSF012O05+          ACACGAAGCTCGAAGACAACCGGCTTCAACTGAAGAGCTTCTGGGGTCTCTTCTTAATAA
                      ____________________________________________________________
consensus             ACACGAAGCTCGAAGACAACCGGCTTCAACTGAAGAGCTTCTGGGGTCTCTTCTTAATAA
 
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rJMSF012O05+          GTGGATCAGTATGCATTTTAGCCCTGCTGGTCTACTTTGCCCTGTTAACGCGCAAGTTTA
                      ____________________________________________________________
consensus             GTGGATCAGTATGCATTTTAGCCCTGCTGGTCTACTTTGCCCTGTTAACGCGCAAGTTTA
 
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rJMSF012O05+          TGCGACATTACTCCAAGCCTGAGTCTGAGCCTGAGCCATCTTCTAGAGGAAGCTCACGAA
                      ____________________________________________________________
consensus             TGCGACATTACTCCAAGCCTGAGTCTGAGCCTGAGCCATCTTCTAGAGGAAGCTCACGAA
 
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rJMSF012O05+          CGGCACGGCTCCAGACATTCCTGTCGTTCGCTGATGAAAAGGAAAACTCGGTGAAATGTC
                      ____________________________________________________________
consensus             CGGCACGGCTCCAGACATTCCTGTCGTTCGCTGATGAAAAGGAAAACTCGGTGAAATGTC
 
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rJMSF012O05+          GGTCAAAAAAGAGGGAGTTGGAGAGTGTTTCAGCTAGAAGTACCTGTGAAGATGCACAAT
                      ____________________________________________________________
consensus             GGTCAAAAAAGAGGGAGTTGGAGAGTGTTTCAGCTAGAAGTACCTGTGAAGATGCACAAT
 
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rJMSF012O05+          GAATGGTTCCAAGCTTCACAAATGCACAGATAGCAACTTTTCCTTTTTGTATATAACTCC
                      ____________________________________________________________
consensus             GAATGGTTCCAAGCTTCACAAATGCACAGATAGCAACTTTTCCTTTTTGTATATAACTCC
 
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rJMSF012O05+          TTTTTTAGAGGTAATAGCAGTACAGAATAGAATATCTACTTCCACAGCCCTTCTCAAGGT
                      ____________________________________________________________
consensus             TTTTTTAGAGGTAATAGCAGTACAGAATAGAATATCTACTTCCACAGCCCTTCTCAAGGT
 
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rJMSF012O05+          GTATATATTACTTGGTTTGAGGCACTGTGGCTATTGGACAAGATATTTCATTTCATTCAT
                      ____________________________________________________________
consensus             GTATATATTACTTGGTTTGAGGCACTGTGGCTATTGGACAAGATATTTCATTTCATTCAT