Contig 011269:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017G18Sequence584004529 (5)ref|XP_006845995.1|5e-92hypothetical protein AMTR_s00155p00051130 [Amborella trichopoda] gb|ERN07670.1| 743011269 (5)gb|KDO75234.1|2e-140hypothetical protein CISIN_1g015465mg [Citrus sinensis]
JMFF027L02Sequence553004529 (5)ref|XP_006845995.1|5e-85hypothetical protein AMTR_s00155p00051130 [Amborella trichopoda] gb|ERN07670.1| 717011269 (5)gb|KDO75234.1|1e-134hypothetical protein CISIN_1g015465mg [Citrus sinensis]
JMSF011C12Sequence279004529 (5)gb|AAF65513.1|2e-20GTP-binding protein [Capsicum annuum]806011269 (5)gb|KDO75234.1|1e-121hypothetical protein CISIN_1g015465mg [Citrus sinensis]
JMSF011D18Sequence353004529 (5)ref|XP_004231561.1|2e-38PREDICTED: obg-like ATPase 1 [Solanum lycopersicum]767011269 (5)gb|KDO75234.1|4e-118hypothetical protein CISIN_1g015465mg [Citrus sinensis]
JMSF051I08Sequence621004529 (5)ref|XP_004231561.1|6e-108PREDICTED: obg-like ATPase 1 [Solanum lycopersicum]693011269 (5)gb|KDO75234.1|3e-110hypothetical protein CISIN_1g015465mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF027L02+ AGGTCAAAACATCTCTTGAT
rJMFF017G18+ AAAATAGAACATGAACTGTGTCTGAAGGTCAAAACATCTCTTGAT
                      ____________________________________________________________
consensus AAAATAGAACATGAACTGTGTCTGAAGGTCAAAACATCTCTTGAT
 
. : . : . : . : . : . :
rJMFF027L02+ GAGGGTAAAGATGCCCGTCTGGGGGAATGGAAAGCTGCTGACATTGAGATATTGAATACT
rJMFF017G18+ GAGGGTAAAGATGCCCGTCTGGGGGAATGGAAAGCTGCTGACATTGAGATATTGAATACT
                      ____________________________________________________________
consensus GAGGGTAAAGATGCCCGTCTGGGGGAATGGAAAGCTGCTGACATTGAGATATTGAATACT
 
. : . : . : . : . : . :
rJMFF027L02+ TTTCAGTTGCTTACTGCAAAACCTGTTGTTTATTTGGTTAACATGAATGAGAAAGATTAT
rJMFF017G18+ TTTCAGTTGCTTACTGCAAAACCTGTTGTTTATTTGGTTAACATGAATGAGAAAGATTAT
rJMSF051I08+ TGGTTAACATGAATGAGAAAGATTAT
rJMSF011D18+ GTGCTTACTGCAAAACCTGTTGTTTATTTGGTTAACATGAATGAGAAAGATTAT
rJMSF011C12+ GTGCTTACTGCAAAACCTGTTGTTTATTTGGTTAACATGAATGAGAAAGATTAT
                      ____________________________________________________________
consensus TTTCAGTTGCTTACTGCAAAACCTGTTGTTTATTTGGTTAACATGAATGAGAAAGATTAT
 
. : . : . : . : . : . :
rJMFF027L02+ CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
rJMFF017G18+ CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
rJMSF051I08+ CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
rJMSF011D18+ CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
rJMSF011C12+ CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
                      ____________________________________________________________
consensus CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
 
. : . : . : . : . : . :
rJMFF027L02+ GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
rJMFF017G18+ GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
rJMSF051I08+ GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
rJMSF011D18+ GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
rJMSF011C12+ GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
                      ____________________________________________________________
consensus GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
 
. : . : . : . : . : . :
rJMFF027L02+ GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
rJMFF017G18+ GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
rJMSF051I08+ GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
rJMSF011D18+ GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
rJMSF011C12+ GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
                      ____________________________________________________________
consensus GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
 
. : . : . : . : . : . :
rJMFF027L02+ ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
rJMFF017G18+ ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
rJMSF051I08+ ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
rJMSF011D18+ ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
rJMSF011C12+ ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
                      ____________________________________________________________
consensus ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
 
. : . : . : . : . : . :
rJMFF027L02+ TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
rJMFF017G18+ TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
rJMSF051I08+ TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
rJMSF011D18+ TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
rJMSF011C12+ TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
                      ____________________________________________________________
consensus TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
 
. : . : . : . : . : . :
rJMFF027L02+ TTAGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
rJMFF017G18+ TTAGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
rJMSF051I08+ TTTGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
rJMSF011D18+ TTTGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
rJMSF011C12+ TTTGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
                      ____________________________________________________________
consensus TTTGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
 
. : . : . : . : . : . :
rJMFF027L02+ AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
rJMFF017G18+ AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
rJMSF051I08+ AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
rJMSF011D18+ AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
rJMSF011C12+ AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
                      ____________________________________________________________
consensus AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
 
. : . : . : . : . : . :
rJMFF027L02+ CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
rJMFF017G18+ CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
rJMSF051I08+ CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
rJMSF011D18+ CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
rJMSF011C12+ CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
                      ____________________________________________________________
consensus CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
 
. : . : . : . : . : . :
rJMFF027L02+ CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGTTGAGTGAAGAAGTGAT
rJMFF017G18+ CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGTTGAGTGAAGAAGTGAT
rJMSF051I08+ CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGTTGAGTGAAGAAGTGAT
rJMSF011D18+ CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGTTGAGTGAAGAAGTGAT
rJMSF011C12+ CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGATGAGTGAAGAAGTGAT
                      ____________________________________________________________
consensus CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGTTGAGTGAAGAAGTGAT
 
. : . : . : . : . : . :
rJMFF027L02+ ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCA
rJMFF017G18+ ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCAA
rJMSF051I08+ ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCAATGATTTAATACTTTTTGTTCAG
rJMSF011D18+ ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCAATGATTTAATACTTTTTGTTCAG
rJMSF011C12+ ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCAATGATTTAATACTTTTTGTTCAG
                      ____________________________________________________________
consensus ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCAATGATTTAATACTTTTTGTTCAG
 
. : . : . : . : . : . :
rJMSF051I08+ TATTAGCAGTGGAAGCCTTTAGATATGTTCCCTACTTTCACACTTCCTCTACTGTTATGG
rJMSF011D18+ TATTAGCAGTGGAAGCCTTTAGATATGTTCCCTACTTTCACACTTCCTCTACTGTTATGG
rJMSF011C12+ TATTAGCAGTGGAAGCCTTTAGATATGTTCCCTACTTTCACACTTCCTCTACTGTTATGG
                      ____________________________________________________________
consensus TATTAGCAGTGGAAGCCTTTAGATATGTTCCCTACTTTCACACTTCCTCTACTGTTATGG
 
. : . : . : . : . : . :
rJMSF051I08+ GGATTTT
rJMSF011D18+ GGATTTTTGGGTCTCCTT
rJMSF011C12+ GGATTTTTGGGTCTCCTTTGATTGTTATACTAACTTGATAGTGAGATTTTCGCTATGATC
                      ____________________________________________________________
consensus GGATTTTTGGGTCTCCTTTGATTGTTATACTAACTTGATAGTGAGATTTTCGCTATGATC