Contig 011253:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008O16Sequence219006406 (3)648011253 (3)ref|XP_002533134.1|1e-102acyl-CoA oxidase, putative [Ricinus communis] gb|EEF29246.1| acyl-CoA oxidase, p
JMSF018E24Sequence461006406 (3)ref|XP_006355366.1|3e-41PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Solanum tuberosum]634011253 (3)ref|XP_002533134.1|8e-103acyl-CoA oxidase, putative [Ricinus communis] gb|EEF29246.1| acyl-CoA oxidase, p
JMSF024N22Sequence659006536 (2)ref|XP_011022766.1|3e-63PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Populus euphratica]803011253 (3)ref|XP_006355366.1|3e-134PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF024N22+ TGAGGAATGACCATGACATATTTCAAACA
                      ____________________________________________________________
consensus TGAGGAATGACCATGACATATTTCAAACA
 
. : . : . : . : . : . :
rJMSF024N22+ TTGAAGGGGACAACACAGTCCTTCTACAGCAGGTAGCAGGATTTCTTTTGAAGCAGTATA
                      ____________________________________________________________
consensus TTGAAGGGGACAACACAGTCCTTCTACAGCAGGTAGCAGGATTTCTTTTGAAGCAGTATA
 
. : . : . : . : . : . :
rJMSF024N22+ GGGAGAAGTTCAAAGGTGGGACACTTGCAGTTACATGGAACTATTTAAGACAGTCGATGA
                      ____________________________________________________________
consensus GGGAGAAGTTCAAAGGTGGGACACTTGCAGTTACATGGAACTATTTAAGACAGTCGATGA
 
. : . : . : . : . : . :
rJMSF018E24+ CTCAGCCTAACCCAGTAACTTCTAGGTGGGAAGGTGAAGACCATTTGC
rJMSF024N22+ ATTCTTATCTCTCTCAGCCTAACCCAGTAACTGCTAGGTGGGAAAGTGAAGACCATTTGC
rJMSF008O16+ CTCAGCCTAACCCAGTAACTTCTAGGTGGGAAGGTGAAGACCATTTGC
                      ____________________________________________________________
consensus ATTCTTATCTCTCTCAGCCTAACCCAGTAACTTCTAGGTGGGAAGGTGAAGACCATTTGC
 
. : . : . : . : . : . :
rJMSF018E24+ GAGATCCTAACTTCCAGTTAGATGCTTTTAGGTATCGCACATCTCGGTTACTTCAAAGTG
rJMSF024N22+ GAGATCCAAACTTCCAGTTGGATGCTTTTAGGTATCGTACATCACGATTGCTTCAAGGTG
rJMSF008O16+ GAGATCCTAACTTCCAGTTAGATGCTTTTAGGTATCGCACATCTCGGTTACTTCAAAGTG
                      ____________________________________________________________
consensus GAGATCCTAACTTCCAGTTAGATGCTTTTAGGTATCGCACATCTCGGTTACTTCAAAGTG
 
. : . : . : . : . : . :
rJMSF018E24+ TTGCTATTCGACTTCAGAAGCACTCAAAGAATCTTGGGGGCTTTGGTGCTTGGAATAGAT
rJMSF024N22+ TCTCTGTTCGACTTCAGAAGCACTTGAAGACCCTGGGGGGCTTTGGTGCTTGGAATAGAT
rJMSF008O16+ TTGCTATTCGACTTCAGAAGCACTCAAAGAATCTTGGGGGCTTTGGTGCTTGGAATAGAT
                      ____________________________________________________________
consensus TTGCTATTCGACTTCAGAAGCACTCAAAGAATCTTGGGGGCTTTGGTGCTTGGAATAGAT
 
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rJMSF018E24+ GCTTAAATCACCTCTTGACACTTGCAGAGTCCCACATTGAGTCCTTCATCCTTGAAATTT
rJMSF024N22+ GCTTAAATCATCTGTTGACGCTCGCAGAGTCCCACATTGAGTCCTTCATCCTTGAAAACT
rJMSF008O16+ GCTTAAATCACCTCTTGACACTTGCAGAGTCCCACATTGAGTCCTTCATCCTTGAAATTT
                      ____________________________________________________________
consensus GCTTAAATCACCTCTTGACACTTGCAGAGTCCCACATTGAGTCCTTCATCCTTGAAATTT
 
. : . : . : . : . : . :
rJMSF018E24+ TTATTCAAGCTGTCAAAAGTTGTCCCGATCCCAGTTCTCGTGCTGCTCTGAAACTTGTCT
rJMSF024N22+ TCATTGAAGCCATAAAACGTTGTCCTAATGCCAACTCTCGTGCTGCCCTGAAACTCGTCT
rJMSF008O16+ TTATTCAAGCTGTCAAAAGTTGTCCCGATCCCAGTTCTCGTGCTGCTCTGAAACTTGTCT
                      ____________________________________________________________
consensus TTATTCAAGCTGTCAAAAGTTGTCCCGATCCCAGTTCTCGTGCTGCTCTGAAACTTGTCT
 
. : . : . : . : . : . :
rJMSF018E24+ GCGACCTTTATGCTTTGAATCGAATCTGGAATGATATAGGAACTTACCGCAATGTAGACT
rJMSF024N22+ GCGACCTTTATGCCTTGGATCGAATCTGGAATGACATAGGAACTTATCGCAATGTGGATT
rJMSF008O16+ GCGACCTTTATGCTTTGAATCGAATCTGGAATGATATAGGAACTTACCGCAATGTAGACT
                      ____________________________________________________________
consensus GCGACCTTTATGCTTTGAATCGAATCTGGAATGATATAGGAACTTACCGCAATGTAGACT
 
. : . : . : . : . : . :
rJMSF018E24+ ATGTGGCTCCTAACAAAGCTAAGGCAATTAACAAGTTAACTGAATATCTGTGCTTCCAAG
rJMSF024N22+ ACCTGGCTCCTAACAAAGCTAAGGCAGTTCAAAAGTTGATGGAATATCTGTGTTTCCAAG
rJMSF008O16+ ATGTGGCTCCTAACAAAGCTAAGGCAATTAACAAGTTAACTGAATATCTGTGCTTCCAAG
                      ____________________________________________________________
consensus ATGTGGCTCCTAACAAAGCTAAGGCAATTAACAAGTTAACTGAATATCTGTGCTTCCAAG
 
. : . : . : . : . : . :
rJMSF018E24+ TCAGAAATACAGCAAAGGACCTCGTTGATGCCTTTGACCTACCAGATTATGTTATACGGG
rJMSF024N22+ TTAGGAATATCGCAAAGGAGCTCATAGATGGCTTTGATATACCCGAGTATGTTATACGCG
rJMSF008O16+ TCAGAAATACAGCAAAGGACCTCGTTGATGCCTTTGACCTACCAGATTATGTTATACGGG
                      ____________________________________________________________
consensus TCAGAAATACAGCAAAGGACCTCGTTGATGCCTTTGACCTACCAGATTATGTTATACGGG
 
. : . : . : . : . : . :
rJMSF018E24+ CTCCAATTGCTTTGCAGGAT
rJMSF024N22+ CTCCAATCGCTTTGCAGGAT
rJMSF008O16+ CTCCAATTGCTTTGCAGGATTCGGAACAAGTTTACTTACAATACGCTCAATATGCCGGAT
                      ____________________________________________________________
consensus CTCCAATTGCTTTGCAGGATTCGGAACAAGTTTACTTACAATACGCTCAATATGCCGGAT
 
. : . : . : . : . : . :
rJMSF008O16+ TCTAGTTCCTGCACAAGGCAATAAACAACTTCATCTTCAGATAGGATAGTTTCAAATATA
                      ____________________________________________________________
consensus TCTAGTTCCTGCACAAGGCAATAAACAACTTCATCTTCAGATAGGATAGTTTCAAATATA
 
. : . : . : . : . : . :
rJMSF008O16+ CAACAGAAAATAAAAAGGGGGATGGGTCTGGGATCATCATTGATTTGAATCTACAACTAT
                      ____________________________________________________________
consensus CAACAGAAAATAAAAAGGGGGATGGGTCTGGGATCATCATTGATTTGAATCTACAACTAT