clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF032J13 | Sequence | 422 | 009407 (3) | ref|XP_009617667.1| | 4e-34 | PREDICTED: serine carboxypeptidase-like [Nicotiana tomentosiformis] | 661 | 011225 (3) | ref|XP_006343737.1| | 281 | PREDICTED: serine carboxypeptidase-like 48-like [Solanum tuberosum] |
JMFF051G01 | Sequence | 635 | 009407 (3) | ref|XP_009617667.1| | 5e-82 | PREDICTED: serine carboxypeptidase-like [Nicotiana tomentosiformis] | 511 | 011225 (3) | ref|XP_009592158.1| | 2e-52 | PREDICTED: serine carboxypeptidase-like [Nicotiana tomentosiformis] |
JMSF030N04 | Sequence | 643 | 009407 (3) | ref|XP_009617667.1| | 5e-72 | PREDICTED: serine carboxypeptidase-like [Nicotiana tomentosiformis] | 711 | 011225 (3) | ref|XP_006343737.1| | 313 | PREDICTED: serine carboxypeptidase-like 48-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF030N04+ TCAACATGATACTGCAGATTGCAGGCAATA
____________________________________________________________
consensus TCAACATGATACTGCAGATTGCAGGCAATA
. : . : . : . : . : . :
rJMSF030N04+ TAAATTACTATGATATCCGTAAGAGCTGTGAAGGGGACTTTTGNTACGACTTCTCGAACA
rJMFF032J13+ TACGACTTCTCGAACA
____________________________________________________________
consensus TAAATTACTATGATATCCGTAAGAGCTGTGAAGGGGACTTTTGNTACGACTTCTCGAACA
. : . : . : . : . : . :
rJMSF030N04+ TGGAAGCTTTACTCAACAAGAACACAGTTAGAAGTGCTCTGGGTGTTGGGGACATCGATT
rJMFF032J13+ TGGAAGCTTTACTCAACAAGAACACAGTTAGAAGTGCTCTGGGTGTTGGGGACATCGATT
____________________________________________________________
consensus TGGAAGCTTTACTCAACAAGAACACAGTTAGAAGTGCTCTGGGTGTTGGGGACATCGATT
. : . : . : . : . : . :
rJMSF030N04+ TTGTTTCATGCAGTTCTGCTGTCTACCAGGCAATGATTTTGGACTGGATGAGGAATCTTG
rJMFF032J13+ TTGTTTCATGCAGTTCTGCTGTCTACCAGGCAATGATTTTGGACTGGATGAGGAATCTTG
____________________________________________________________
consensus TTGTTTCATGCAGTTCTGCTGTCTACCAGGCAATGATTTTGGACTGGATGAGGAATCTTG
. : . : . : . : . : . :
rJMSF030N04+ AAGTTGGTATTCCTCCACTGCTTGAGGATGGAATCAATCTGCTTATATACGCTGGGGAAT
rJMFF032J13+ AAGTTGGTATTCCTCCACTGCTTGAGGATGGAATCAATCTGCTTATATACGCTGGGGAAT
rJMFF051G01+ GGAATCAATCTGCTTATATACGCTGGGGAAT
____________________________________________________________
consensus AAGTTGGTATTCCTCCACTGCTTGAGGATGGAATCAATCTGCTTATATACGCTGGGGAAT
. : . : . : . : . : . :
rJMSF030N04+ ATGATCTTATCTGCAACTGGCTCGGTAACTCAAAATGGGTTCATGCCATGGAATGGTCTG
rJMFF032J13+ ATGATCTTATCTGCAACTGGCTCGGTAACTCAAAATGGGTTCATGCCATGGAATGGTCTG
rJMFF051G01+ ATGATCTTATCTGCAACTGGCTCGGTAACTCAAAATGGGTTCATGCCATGGAATGGTCTG
____________________________________________________________
consensus ATGATCTTATCTGCAACTGGCTCGGTAACTCAAAATGGGTTCATGCCATGGAATGGTCTG
. : . : . : . : . : . :
rJMSF030N04+ GTCAGAAAGACTTTCGTGCAGCACCAAATGTTCCGTTTACAGTAGATGGCGAGGAGAAAG
rJMFF032J13+ GTCAGAAAGACTTTCGTGCAGCACCAAATGTTCCGTTTACAGTAGATGGCGAGGAGAAAG
rJMFF051G01+ GTCAGAAAGACTTTCGTGCAGCACCAAATGTTCCGTTTACAGTAGATGGCGAGGAGAAAG
____________________________________________________________
consensus GTCAGAAAGACTTTCGTGCAGCACCAAATGTTCCGTTTACAGTAGATGGCGAGGAGAAAG
. : . : . : . : . : . :
rJMSF030N04+ GGATACAAAAGAACCATGGACCACTCACTTTTCTTAAGGTCCATGATGCAGGCCACATGG
rJMFF032J13+ GGATACAAAAGAACCATGGACCACTCACTTTTCTTAAGGTCCATGATGCAGGCCACATGG
rJMFF051G01+ GGATACAAAAGAACCATGGACCACTCACTTTTCTTAAGGTCCATGATGCAGGCCACATGG
____________________________________________________________
consensus GGATACAAAAGAACCATGGACCACTCACTTTTCTTAAGGTCCATGATGCAGGCCACATGG
. : . : . : . : . : . :
rJMSF030N04+ TTCCAATGGATCAACCCAAGGCATCACTGGAAATGCTTCAGAGGTGGATGCAAGGCAAAC
rJMFF032J13+ TTCCAATGGATCAACCCAAGGCATCACTGGAAATGCTTCAGAGGTGGATGCAAGGCAAAC
rJMFF051G01+ TTCCAATGGGTCAACCCAAGGCATCACTGGAAATGCTTCAGAGGTGGATGCAAGGCAAAC
____________________________________________________________
consensus TTCCAATGGATCAACCCAAGGCATCACTGGAAATGCTTCAGAGGTGGATGCAAGGCAAAC
. : . : . : . : . : . :
rJMSF030N04+ TTGCATCAGCAGTGAAAGGGCATCTTGCTCCCATGTGACTACCGTAACTATAAGAGCCAT
rJMFF032J13+ TTGCATCAGCAGTGAAAGGGCATCTTGCTCCCATGTGACTACCGTAACTATAAGAGCCAT
rJMFF051G01+ TTGCATCAGCAGTGAAAGGGCATCTTGCTCCCATGTGACTACCGTAACTATAAGAGCCAT
____________________________________________________________
consensus TTGCATCAGCAGTGAAAGGGCATCTTGCTCCCATGTGACTACCGTAACTATAAGAGCCAT
. : . : . : . : . : . :
rJMSF030N04+ AACACAAAAAAAATTTCTGATCTGTTTCACACAGCTTCCTCAAATTGATGTCCTGATAAC
rJMFF032J13+ AACACAAAAAAAATTTCTGATCTGTTTCACACAGCTTCCTCAAATTGATGTCCTGATAAC
rJMFF051G01+ AACACAAAAAAAATTTCTGATCTGTTTCACACAGCTTCCTCAAATTGATGTCCTGATAAC
____________________________________________________________
consensus AACACAAAAAAAATTTCTGATCTGTTTCACACAGCTTCCTCAAATTGATGTCCTGATAAC
. : . : . : . : . : . :
rJMSF030N04+ AGTTTAATCAATTCATGTGCTTATGTAGATATAAATTGCACCTATGGGCTTCTATTGATG
rJMFF032J13+ AGTTTAATCAATTCATGTGCTTATGTAGATATAAATTGCACCTATGGGCTTCTATTGATG
rJMFF051G01+ AGTTTAATCAATTCATGTGCTTATGTAGATATAAATTGCACCTATGGGCTTCTATTGATG
____________________________________________________________
consensus AGTTTAATCAATTCATGTGCTTATGTAGATATAAATTGCACCTATGGGCTTCTATTGATG
. : . : . : . : . : . :
rJMSF030N04+ TCCTGCAATTTGTCACTGAAA
rJMFF032J13+ TCCTGCAATTTGTCACTGAAATGGTTCATTTAAAA
rJMFF051G01+ TCCTGCAATTTGTCACTGAAATGGTTCATTTAAAAACAAAAAAAAAAAAAAAACTCTCCA
____________________________________________________________
consensus TCCTGCAATTTGTCACTGAAATGGTTCATTTAAAAACAAAAAAAAAAAAAAAACTCTCCA