Contig 011215:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002N04Sequence572001555 (3)ref|XP_009606311.1|6e-74PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Nicotiana tomentosifor692011215 (3)ref|XP_009788298.1|2e-73PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Nicotiana sylvestris]
JMFF036G23Sequence580001555 (3)ref|XP_009606311.1|1e-73PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Nicotiana tomentosifor679011215 (3)ref|XP_011092703.1|9e-97PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Sesamum indicum]
JMFF050C22Sequence579001555 (3)ref|XP_009606311.1|4e-75PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Nicotiana tomentosifor478011215 (3)ref|XP_011092703.1|7e-60PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF002N04+ ACTTAAACACCGCCATTCA
                      ____________________________________________________________
consensus ACTTAAACACCGCCATTCA
 
. : . : . : . : . : . :
rJMFF036G23+ CGAGCTGGTCTGAAGCGTTCGAATGGTTGGATAACCAAAGACC
rJMFF002N04+ GCCCGGAACCAATTCATCGAGCTGGTCTGAAGCGTTCGAATGGTTGGATAACCAAAGACC
                      ____________________________________________________________
consensus GCCCGGAACCAATTCATCGAGCTGGTCTGAAGCGTTCGAATGGTTGGATAACCAAAGACC
 
. : . : . : . : . : . :
rJMFF036G23+ GAAGTCTGTGGTCTTTGTCGGTTTCGGGAGCGAGTACAAGATGCCTATTCACCAAATCCA
rJMFF002N04+ GAAGTCTGTGGTCTTTGTCGGTTTCGGAAGCGAGTACAAGATGCNTATTCACCAAATCCA
                      ____________________________________________________________
consensus GAAGTCTGTGGTCTTTGTCGGTTTCGGGAGCGAGTACAAGATGCCTATTCACCAAATCCA
 
. : . : . : . : . : . :
rJMFF036G23+ CGAATTGGCTTCTGCACTGGAGCTTTCCCGGATGCCTTTCCTATGGATTCTGAGGAAACC
rJMFF002N04+ CGAATTGGCTTCTGCACTGGAGCTTTCCCGGATGCCTTTCCTATGGATTCTGAGGAAACC
                      ____________________________________________________________
consensus CGAATTGGCTTCTGCACTGGAGCTTTCCCGGATGCCTTTCCTATGGATTCTGAGGAAACC
 
. : . : . : . : . : . :
rJMFF036G23+ GGGAATAGATAACCCCGGTTACCCCGCCCTGTTGCCTACGGATTTCGTTAACAGAACCTC
rJMFF002N04+ GGGAATAGATAACCCCGGTTACCCCGCCCTGTTGCCTACGGATTTCGTTAACAGAACCTC
                      ____________________________________________________________
consensus GGGAATAGATAACCCCGGTTACCCCGCCCTGTTGCCTACGGATTTCGTTAACAGAACCTC
 
. : . : . : . : . : . :
rJMFF036G23+ AAACCAGGGCAGAGTTATCCTCGGTTGGGCTCCTCAACAGAACATACTCGCCCATCCCGC
rJMFF002N04+ AAACCAGGGCAGAGTTATCCTCGGTTGGGCTCCTCAACAGAACATACTCGCCCATCCCGC
rJMFF050C22+ ACCAGGGCAGAGTTATCCTCGGTTGGGCTCCTCAACAGAACATACTCGCCCATCCCGC
                      ____________________________________________________________
consensus AAACCAGGGCAGAGTTATCCTCGGTTGGGCTCCTCAACAGAACATACTCGCCCATCCCGC
 
. : . : . : . : . : . :
rJMFF036G23+ CATTGGCGGGTGCCTGTTCCATTCCGGGTGGGGTACGATAATTGAGTCCCTTGGATTCGG
rJMFF002N04+ CATTGGCGGGTGCCTGTTCCATTCCGGGTGGGGTACGATAATTGAGTCCCTTGGATTCGG
rJMFF050C22+ CATTGGCGGGTGCCTGTTCCATTCCGGGTGGGGTACGATAATTGAGTCCCTTGGATTCGG
                      ____________________________________________________________
consensus CATTGGCGGGTGCCTGTTCCATTCCGGGTGGGGTACGATAATTGAGTCCCTTGGATTCGG
 
. : . : . : . : . : . :
rJMFF036G23+ GCACCCACTCATCCTGCTGCCAATGGTAGCCGACCAAGGACTCAACGCTAAGCTGTTAGT
rJMFF002N04+ GCACCCACTCATCCTGCTGCCAATGGTAGCCGACCAAGGACTCAACGCTAAGCT-TTAGT
rJMFF050C22+ GCACCCACTCATCCTGCTGCCAATGGTAGCCGACCAAGGACTCAACGCTAAGCTGTTAGT
                      ____________________________________________________________
consensus GCACCCACTCATCCTGCTGCCAATGGTAGCCGACCAAGGACTCAACGCTAAGCTGTTAGT
 
. : . : . : . : . : . :
rJMFF036G23+ CGAAAAGGAAATAGGGTACGAGGTTCCTAGGAGAGAAGACGGCTCCTTCAGCCGGGACAT
rJMFF002N04+ CGAAAAGGAAATAGGGTACGAGGTTCCTAGGAGAGAAGACGGCTCCTTCAGCCGGGACAT
rJMFF050C22+ CGAAAAGGAAATAGGGTACGAGGTTCCTAGGAGAGAAGACGGCTCCTTCAGCCGGGACAT
                      ____________________________________________________________
consensus CGAAAAGGAAATAGGGTACGAGGTTCCTAGGAGAGAAGACGGCTCCTTCAGCCGGGACAT
 
. : . : . : . : . : . :
rJMFF036G23+ GGTAGCCAACTCAATAAGATCGGTAATGGCATCCCGAGAGGGAGAAGGAATAAGGCTGAA
rJMFF002N04+ GGTAGCCAACTCAATAAGATCGGTAATGGCATCCCGAGAGGGAGAAGGAATAAGGCTGAA
rJMFF050C22+ GGTAGCCAACTCAATAAGATCGGTAATGGCATCCCGAGAGGGAGAAGGAATAAGGCTGAA
                      ____________________________________________________________
consensus GGTAGCCAACTCAATAAGATCGGTAATGGCATCCCGAGAGGGAGAAGGAATAAGGCTGAA
 
. : . : . : . : . : . :
rJMFF036G23+ GGCCGCTCAAATGGCAAACATATTTGGCAACCACAATCTCCACGACAACTACATAGATCA
rJMFF002N04+ GGCCGCTCAAATGGCAAACATATTTGGCAACCACAATCTCCACGACAACTACATAGATCA
rJMFF050C22+ GGCCGCTCAAATGGCAAACATATTTGGCAACCACAATCTCCACGACAACTACATAGATCA
                      ____________________________________________________________
consensus GGCCGCTCAAATGGCAAACATATTTGGCAACCACAATCTCCACGACAACTACATAGATCA
 
. : . : . : . : . : . :
rJMFF036G23+ GTTCATTGAGTATTTCCAATCAAAAATTTTAACACAATGCAAAAGAGGCTAGAACACATG
rJMFF002N04+ GTTCATTGAGTATTTCCAATCAAAAATTTTAACACAATGCAAAAGAGGCTAGAACACATG
rJMFF050C22+ GTTCATTGAGTATTTCCAATCAAAAATTTTAACACAATGCAAAAGAGGCTAGAACACATG
                      ____________________________________________________________
consensus GTTCATTGAGTATTTCCAATCAAAAATTTTAACACAATGCAAAAGAGGCTAGAACACATG
 
. : . : . : . : . : . :
rJMFF036G23+ CACAAGTACACAAA
rJMFF002N04+ CACAAGTACACAAA
rJMFF050C22+ CACAAGTACACAAATATTATTXXXXXXXXXXXXXXXXXXXCAATAAGACATATTAAATCG
                      ____________________________________________________________
consensus CACAAGTACACAAATATTATTNNNNNNNNNNNNNNNNNNNCAATAAGACATATTAAATCG