Contig 011214:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045P03Sequence622007644 (5)ref|XP_011081956.1|2e-79PREDICTED: 3-ketoacyl-CoA synthase 10 [Sesamum indicum]590011214 (4)ref|XP_010049293.1|7e-47PREDICTED: 3-ketoacyl-CoA synthase 10 [Eucalyptus grandis] gb|KCW81820.1| hypoth
JMFF049P23Sequence622007644 (5)ref|XP_011081956.1|9e-78PREDICTED: 3-ketoacyl-CoA synthase 10 [Sesamum indicum]355011214 (4)ref|XP_009594847.1|1e-16PREDICTED: 3-ketoacyl-CoA synthase 10 [Nicotiana tomentosiformis]
JMSF027I13Sequence747011214 (4)emb|CDP17887.1|3e-92unnamed protein product [Coffea canephora]
JMSF034E20Sequence741011214 (4)emb|CDP17887.1|3e-109unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF034E20+ CTCGAGCACATTGTCCGGACTCACNAAGGCGCCGATGATC
                      ____________________________________________________________
consensus CTCGAGCACATTGTCCGGACTCACNAAGGCGCCGATGATC
 
. : . : . : . : . : . :
rJMSF034E20+ GTGCTTTCAGGTCCATCTACCAAGAAGAAGATGAAGAACGCCACAAGGGGCTGAAGATAA
rJMSF027I13+ AAGATGAAGAACGCCACAAGGGGCTGAAGATAA
                      ____________________________________________________________
consensus GTGCTTTCAGGTCCATCTACCAAGAAGAAGATGAAGAACGCCACAAGGGGCTGAAGATAA
 
. : . : . : . : . : . :
rJMSF034E20+ GCAAAGACTTGATTGAAATAGGAGGAGATGCACTGAAGACCAACATCACCACACTAGGCC
rJMSF027I13+ GCAAAGACTTGATTGAAATAGGAGGAGATGCACTGAAGACCAACATCACCACACTAGGCC
                      ____________________________________________________________
consensus GCAAAGACTTGATTGAAATAGGAGGAGATGCACTGAAGACCAACATCACCACACTAGGCC
 
. : . : . : . : . : . :
rJMSF034E20+ CTCTAGTCCTCCCATTCTCCGAGCAGCTCTTCTTCTTCGCAACCCTAATTTGGACCCACA
rJMFF045P03+ CA
rJMSF027I13+ CTCTAGTCCTCCCATTCTCCGAGCAGCTCTTCTTCTTCGCAACCCTAATTTGGACCCACA
                      ____________________________________________________________
consensus CTCTAGTCCTCCCATTCTCCGAGCAGCTCTTCTTCTTCGCAACCCTAATTTGGACCCACA
 
. : . : . : . : . : . :
rJMSF034E20+ TTTTCCCCTCCAAGAAAGCGCCAAACAAGCCCTACATCCCCGACTACAAGCTAGCATTCG
rJMFF045P03+ TTTTCCCCTCCAAGAAAGCGCCAAACAAGCCCTACATCCCCGACTACAAGCTAGCATTCG
rJMSF027I13+ TTTTCCCCTCCAAGAAAGCGCCAAACAAGCCCTACATCCCCGACTACAAGCTAGCATTCG
                      ____________________________________________________________
consensus TTTTCCCCTCCAAGAAAGCGCCAAACAAGCCCTACATCCCCGACTACAAGCTAGCATTCG
 
. : . : . : . : . : . :
rJMSF034E20+ ACCACTTTTGCGTCCACCCCGCCGGCAAGGCTGTCCTGGACGAGCTCCAGCGCAACCTAG
rJMFF045P03+ ACCACTTTTGCGTCCACCCCGCCGGCAAGGCTGTCCTGGACGAGCTCCAGCGCAACCTAG
rJMSF027I13+ ACCACTTTTGCGTCCACCCCGCCGGCAAGGCTGTCCTGGACGAGCTCCAGCGCAACCTAG
                      ____________________________________________________________
consensus ACCACTTTTGCGTCCACCCCGCCGGCAAGGCTGTCCTGGACGAGCTCCAGCGCAACCTAG
 
. : . : . : . : . : . :
rJMSF034E20+ GGTTGAGCGACAACAACATGGAGGCGTCCAGGGCGGCCCTTCACCGCTTCGGGAACAATT
rJMFF045P03+ GGTTGAGCGACAACAACATGGAGGCGTCCAGGGCGGCCCTTCACCGCTTCGGGAACAATT
rJMSF027I13+ GGTTGAGCGACAACAACATGGAGGCGTCCAGGGCGGCCCTTCACCGCTTCGGGAACAATT
                      ____________________________________________________________
consensus GGTTGAGCGACAACAACATGGAGGCGTCCAGGGCGGCCCTTCACCGCTTCGGGAACAATT
 
. : . : . : . : . : . :
rJMSF034E20+ CCAGCAGCAGCATATGGTACGAGCTGGCGTATCTGGAGGCCAAGGGGAGAGTGAAACGAG
rJMFF045P03+ CCAGCAGCAGCATATGGTACGAGCTGGCGTATCTGGAGGCCAA-GTGAGAGTGAAACGAG
rJMSF027I13+ CCAGCAGCAGCATATGGTACGAGCTGGCGTATCTGGAGGCCAAGGGGAGAGTGAAACGAG
                      ____________________________________________________________
consensus CCAGCAGCAGCATATGGTACGAGCTGGCGTATCTGGAGGCCAAGGGGAGAGTGAAACGAG
 
. : . : . : . : . : . :
rJMSF034E20+ GCCATCGTGTTTGGCAAATTGCCTTTGGCTCAGGTTTCAAGTGCAACAGCGCTGTTTGGA
rJMFF045P03+ GCCATCGTGTTTGGCAAATTGCCTTTGGCTCAGGTTTCAAGTGCAACAGCGCTGTTTGGA
rJMSF027I13+ GCCATCGTGTTTGGCAAATTGCCTTTGGCTCAGGTTTCAAGTGCAACAGCGCTGTTTGGA
rJMFF049P23+ TCGTGTTTGGCAAATTGCCTTTGGCTCAGGTTTCAAGTGCAACAGCGCTGTTTGGA
                      ____________________________________________________________
consensus GCCATCGTGTTTGGCAAATTGCCTTTGGCTCAGGTTTCAAGTGCAACAGCGCTGTTTGGA
 
. : . : . : . : . : . :
rJMSF034E20+ AGGCGATGAGGCGTGTTGGGACGGCGGGAGGGAATCCTTGGCTCGATTGTGTTGATAGAT
rJMFF045P03+ AGGCGATGAGGCGTGTTGGGACGGCGGGAGGGAATCCTTGGCTCGATTGTGTTGATAGAT
rJMSF027I13+ AGGCGATGAGGCGTGTTGGGACGGCGGGAGGGAATCCTTGGCTCGATTGTGTTGATAGAT
rJMFF049P23+ AGGCGATGAGGCGTGTTGGGACGGCGGGAGGGAATCCTTGGCTCGATTGTGTTGATAGAT
                      ____________________________________________________________
consensus AGGCGATGAGGCGTGTTGGGACGGCGGGAGGGAATCCTTGGCTCGATTGTGTTGATAGAT
 
. : . : . : . : . : . :
rJMSF034E20+ ACCCTCAGGCTCTCTACTCCCCTTAGAAAGCTATTCATGGTAGCAAATTAATTATAACGT
rJMFF045P03+ ACCCTCAGGCTCTCTACTCCCCTTAGAAAGCTATTCATGGTAGCAAATTAATTATAACGT
rJMSF027I13+ ACCCTCAGGCTCTCTACTCCCCTTAGAAAGCTATTCATGGTAGCAAATTAATTATAACGT
rJMFF049P23+ ACCCTCAGGCTCTTTACTCCCCTTAGAAAGCTATTCATGGTAGCAAATTAATTATAACGT
                      ____________________________________________________________
consensus ACCCTCAGGCTCTCTACTCCCCTTAGAAAGCTATTCATGGTAGCAAATTAATTATAACGT
 
. : . : . : . : . : . :
rJMSF034E20+ CAACCTTTCAACATTGAAGTGGAAGCTAGGCTTCACCTTGAAATTTATAATAATGGTTAC
rJMFF045P03+ CAACCTTTCAACATTGAAGTGGAAGCTAGGCTTCACCTTGAAATTTATAATAATGGTTAC
rJMSF027I13+ CAACCTTTCAACATTGAAGTGGAAGCTAGGCTTCACCTTGAAATTTATAATAATGGTTAC
rJMFF049P23+ CACCCTTTCACCATTGAAGTGGAAGCTAGGCTTCCCCTTGAAATTTATAATAATGG-TCC
                      ____________________________________________________________
consensus CAACCTTTCAACATTGAAGTGGAAGCTAGGCTTCACCTTGAAATTTATAATAATGGTTAC
 
. : . : . : . : . : . :
rJMSF034E20+ ACTGCAATTTCTATAATTTCGTGTGTAATAGTATTGCATGT
rJMFF045P03+ ACTGCAATTTCTATAATTTCGTGTGTAATAGTATTGCATGTTTAGTGAAATTGTATTATT
rJMSF027I13+ ACTGCAATTTCTATAATTTCGTGTGTAATAGTATTGCATGTTTAGTGAAATTGTATTATT
rJMFF049P23+ CCTGCAATTTCTATAATTTCGGGTGTAATAGTATTGCATGTTTAGTGAAATTGTATTATT
                      ____________________________________________________________
consensus ACTGCAATTTCTATAATTTCGTGTGTAATAGTATTGCATGTTTAGTGAAATTGTATTATT
 
. : . : . : . : . : . :
rJMFF045P03+ GCTTATATAAAAGTTACTTATGGTA
rJMSF027I13+ GCTTATATAAAAGTTACTTATGGTA
rJMFF049P23+ GCTTATATAAAAGTTACTTATGGTATTGTTACGTATTACTTTATAATTAAATGTTTTTAT
                      ____________________________________________________________
consensus GCTTATATAAAAGTTACTTATGGTATTGTTACGTATTACTTTATAATTAAATGTTTTTAT