| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009P16 | Sequence | 537 | 000166 (5) | gb|KDO44657.1| | 6e-81 | hypothetical protein CISIN_1g0124231mg, partial [Citrus sinensis] | 581 | 011211 (5) | emb|CDP06636.1| | 2e-16 | unnamed protein product [Coffea canephora] |
| JMFF020I14 | Sequence | 575 | 000166 (5) | emb|CDP06636.1| | 1e-84 | unnamed protein product [Coffea canephora] | 613 | 011211 (5) | emb|CDP06636.1| | 1e-32 | unnamed protein product [Coffea canephora] |
| JMFF029H04 | Sequence | 516 | 000166 (5) | emb|CDP06636.1| | 4e-72 | unnamed protein product [Coffea canephora] | 652 | 011211 (5) | emb|CDP06636.1| | 4e-24 | unnamed protein product [Coffea canephora] |
| JMFF037F16 | Sequence | 540 | 000166 (5) | emb|CDP06636.1| | 2e-80 | unnamed protein product [Coffea canephora] | 702 | 011211 (5) | emb|CDP06636.1| | 6e-40 | unnamed protein product [Coffea canephora] |
| JMFF049D09 | Sequence | 647 | 000166 (5) | ref|NP_001275129.1| | 3e-87 | uncharacterized protein LOC102577536 [Solanum tuberosum] gb|ABA46771.1| unknown | 664 | 011211 (5) | emb|CDP06636.1| | 2e-10 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMFF020I14+ CTGAGATTG
rJMFF037F16+ TGAATGAGACAGTGAACGTAGTCACGGCAAAAACACCTGAGATTG
____________________________________________________________
consensus TGAATGAGACAGTGAACGTAGTCACGGCAAAAACACCTGAGATTG
. : . : . : . : . : . :
rJMFF020I14+ GTCAAAGAACCTGGGGGATCATGAAAGGGGTCNTGGCATTAGCTTCACAGAAGGTTGAAG
rJMFF037F16+ GTCAAAGAACCTGGGGGATCATGAAAGGGGTACTGGCATTAGCTTCACAGAAGGTTGAAG
rJMFF029H04+ GCATTAGCTTCACAGAAGGTTGAAG
____________________________________________________________
consensus GTCAAAGAACCTGGGGGATCATGAAAGGGGTCCTGGCATTAGCTTCACAGAAGGTTGAAG
. : . : . : . : . : . :
rJMFF020I14+ AATATACTAAGGAGGACAATGGCAGCTGGAAAAACGATAGTTGNCANCGGAATGAAAGTG
rJMFF037F16+ AATATACTAAGGAGGACAATGGCAACTGGAAAAACGATAGCTGGCAACGGAATGAAAGTG
rJMFF009P16+ ACAATGGCAACTGGAAAAACGATAGCTGGCAACGGAATGAAAGTG
rJMFF029H04+ AATATACTAAGGAGGACAATGGCAACTGGAAAAACGATAGCTGGCAACGGAATGAAAGTG
rJMFF049D09+ AAGTG
____________________________________________________________
consensus AATATACTAAGGAGGACAATGGCAACTGGAAAAACGATAGCTGGCAACGGAATGAAAGTG
. : . : . : . : . : . :
rJMFF020I14+ AACAGAATGGCTATTATCNGGACTTTAATCACAACTNTAAAGGTTTGAACTCTTCTGGGG
rJMFF037F16+ AACAGAATGGCTATTATCAGGACTTTAATCACAACTCTAAAGGTTTGAACTCTTCTGGGG
rJMFF009P16+ AACAGAATGGCTATTATCAGGACTTTAATCACAACTCTAAAGGTTTGAACTCTTCTGGGG
rJMFF029H04+ AACAGAATGGCTATTATCAGGACTTTAATCACAACTCTAAAGGTTTGAACTCTTCTGGGG
rJMFF049D09+ AACAGAATGGCTATTATCAGGACTTTAATCACAACTCTAAAGGTTTGAACTCTTCTGGGG
____________________________________________________________
consensus AACAGAATGGCTATTATCAGGACTTTAATCACAACTCTAAAGGTTTGAACTCTTCTGGGG
. : . : . : . : . : . :
rJMFF020I14+ GAGGAGGTGGTCAGTCCTCATCCGGTCGACAGTTCAATTCTGTCAACTCCGGTTCGTGGG
rJMFF037F16+ GAGGAGGTGGTCAGTCCTCATCCGGTCGACAGTTCAATTCTGTCAACTCCGGTTCGTGGG
rJMFF009P16+ GAGGAGGTGGTCAGTCCTCATCCGGTCGACAGTTCAATTCTGTCAACTCCGGTTCGTGGG
rJMFF029H04+ GAGGAGGTGGTCAGTCCTCATCCGGTCGACAGTTCAATTCTGTCAACTCCGGTTCGTGGG
rJMFF049D09+ GAGGAGGTGGTCAGTCCTCATCCGGTCGACAGTTCAATTCTGTCAACTCCGGTTCGTGGG
____________________________________________________________
consensus GAGGAGGTGGTCAGTCCTCATCCGGTCGACAGTTCAATTCTGTCAACTCCGGTTCGTGGG
. : . : . : . : . : . :
rJMFF020I14+ ACAATTGGGATACTAAAGGCAACAATACAAAAGAAACAAGCCCAGCTAATAACGATAGCT
rJMFF037F16+ ACAATTGGGATACTAAAGGCAACAATACAAAAGAAACAAGCCCAGCTAATAACGATAGCT
rJMFF009P16+ ACAATTGGGATACTAAAGGCAACAATACAAAAGAAACAAGCCCAGCTAATAACGATAGCT
rJMFF029H04+ ACAATTGGGATACTAAAGGCAACAATACAAAAGAAACAAGCCCAGCTAATAACGATAGCT
rJMFF049D09+ ACAATTGGGATACTAAAGGCAACAATACAAAAGAAACAAGCCCAGCTAATAACGATAGCT
____________________________________________________________
consensus ACAATTGGGATACTAAAGGCAACAATACAAAAGAAACAAGCCCAGCTAATAACGATAGCT
. : . : . : . : . : . :
rJMFF020I14+ GGGCAGGCTGGGATGATGCAAAAGATGATGGGTTTGATGACTTTTACCAGAGTGCACATG
rJMFF037F16+ GGGCAGGCTGGGATGATGCAAAAGATGATGGGTTTGATGACTTTTACCAGAGTGCACATG
rJMFF009P16+ GGGCAGGCTGGGATGATGCAAAAGATGATGGGTTTGATGACTTTTACCAGAGTGCACATG
rJMFF029H04+ GGGCAGGCTGGGATGATGCAAAAGATGATGGGTTTGATGACTTTTACCAGAGTGCACATG
rJMFF049D09+ GGGCAGGCTGGGATGATGCAAAAGATGATGGGTTTGATGACTTTTACCAGAGTGCACATG
____________________________________________________________
consensus GGGCAGGCTGGGATGATGCAAAAGATGATGGGTTTGATGACTTTTACCAGAGTGCACATG
. : . : . : . : . : . :
rJMFF020I14+ ATAATAAACATGTTGGACACAATGGAAAATCAGACACTAAGTGGAGTGATGGAGGGTTCC
rJMFF037F16+ ATAATAAACATGTTGGACACAATGGAAAATCAGACACTAAGTGGAGTGATGGAGGGTTCC
rJMFF009P16+ ATAATAAACATGTTGGACACAATGGAAAATCAGACACTAAGTGGAGTGATGGAGGGTTCC
rJMFF029H04+ ATAATAAACATGTTGGACACAATGGAAAATCAGACACTAAGTGGAGTGATGGAGGGTTCC
rJMFF049D09+ ATAATAAACATGTTGGACACAATGGAAAATCAGACACTAAGTGGAGTGATGGAGGGTTCC
____________________________________________________________
consensus ATAATAAACATGTTGGACACAATGGAAAATCAGACACTAAGTGGAGTGATGGAGGGTTCC
. : . : . : . : . : . :
rJMFF020I14+ TCTAAAGCTGGTAAAAGTTTCAGTAAAACTTCCCAATCATCTTTCAGTAAAACTTTCCCC
rJMFF037F16+ TCTAAAGCTGGTAAAAGTTTCAGTAAAACTTCCCAATCATCTTTCAGTAAAACTTTCCCC
rJMFF009P16+ TCTAAAGCTGGTAAAAGTTTCAGTAAAACTTCCCAATCATCTTTCAGTAAAACTTTCCCC
rJMFF029H04+ TCTAAAGCTGGTAAAAGTTTCAGTAAAACTTCCCAATCATCTTTCAGTAAAACTTTCCCC
rJMFF049D09+ TCTAAAGCTGGTAAAAGTTTCAGTAAAACTTCCCAATCATCTTTCAGTAAAACTTTCCCC
____________________________________________________________
consensus TCTAAAGCTGGTAAAAGTTTCAGTAAAACTTCCCAATCATCTTTCAGTAAAACTTTCCCC
. : . : . : . : . : . :
rJMFF020I14+ TTTGGAATTTAATTCTATCCATATAACTTGTGTTAAGGGATCGTTATTCTGGAGACTGTA
rJMFF037F16+ TTTGGAATTTAATTCTATCCATATAACTTGTGTTAAGGGATTGTTATTCTGGAGACTGTA
rJMFF009P16+ TTTGGAATTTAATTCTATCCATATAACTTGTGTTAAGGGATTGTTATTCTGGAGACTGTA
rJMFF029H04+ TTTGGAATTTAATTCTATCCATATAACTTGTGTTAAGGGATTGTTATTCTGGAGACTGTA
rJMFF049D09+ TTTGGAATTTAATTCTATCCATATAACTTGTGTTAAGGGATTGTTATTCTGGAGACTGTA
____________________________________________________________
consensus TTTGGAATTTAATTCTATCCATATAACTTGTGTTAAGGGATTGTTATTCTGGAGACTGTA
. : . : . : . : . : . :
rJMFF020I14+ AAACTGCCAATAGGGAGGACCACATTACATCCTCCCAGCCTGGNAAAAGAACATAATAT
rJMFF037F16+ AAATTGCCAATAGGGAGGACCA-ATTACATCCTCCCAGCCTGGTAAAAGAACATAATATT
rJMFF009P16+ AAATTGCCAATAGGGAGGACCA-ATTACATCCTCCCAGCCTGGTAAAAGAACATAATATT
rJMFF029H04+ AAATTGCCAATAGGGAGGACCA-ATTACATCCTCCCAGCCTGGTAAAAGAACATAATATT
rJMFF049D09+ AAATTGCCAATAGGGAGGACCA-ATTACATCCTCCCAGCCTGGTAAAAGAACATAATATT
____________________________________________________________
consensus AAATTGCCAATAGGGAGGACCA-ATTACATCCTCCCAGCCTGGTAAAAGAACATAATATT
. : . : . : . : . : . :
rJMFF037F16+ GAAGATTTGATGTTTGTCAGGACCATTATTTCTTGGATTATATTTTTTCATCACATT
rJMFF009P16+ GAAGATTTGATGTTTGTCAGGACCATTATTTCTTGGATTATATTTTTTCATCACATT
rJMFF029H04+ GAAGATTTGATGTTTGTCAGGACCATTATTTCTTGGATTATATTTTTTCATCACATTTGG
rJMFF049D09+ GAAGATTTGATGTTTGTCAGGACCATTATTTCTTGGATTATATTTTTTCATCACATTTGG
____________________________________________________________
consensus GAAGATTTGATGTTTGTCAGGACCATTATTTCTTGGATTATATTTTTTCATCACATTTGG
. : . : . : . : . : . :
rJMFF029H04+ ATTTGTAGTGACAAACCATATTTT
rJMFF049D09+ ATTTGTAGTGACAAACCATATTTTTCCTATGTTCAATTGTGTATTTTTATCATCTTGTAT
____________________________________________________________
consensus ATTTGTAGTGACAAACCATATTTTTCCTATGTTCAATTGTGTATTTTTATCATCTTGTAT
. : . : . : . : . : . :
rJMFF049D09+ GAGTTGTGTGTTTAATTGCTAAAAAAAAAAAAAAAACTCTCCGGGTGATCCGCCATAAGG
____________________________________________________________
consensus GAGTTGTGTGTTTAATTGCTAAAAAAAAAAAAAAAACTCTCCGGGTGATCCGCCATAAGG