Contig 011197: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
JMSF033B12- GAGAACAGCATCATTTTAGCCTCTTTCCTA
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consensus GAGAACAGCATCATTTTAGCCTCTTTCCTA
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JMSF033B12- AGTGCTTCGTAGCCAACTGCTGAGCCGCCTCAGAAATGGGAATCGTGAGACCAGACGAGA
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consensus AGTGCTTCGTAGCCAACTGCTGAGCCGCCTCAGAAATGGGAATCGTGAGACCAGACGAGA
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JMSF033B12- GCCGGAGGATGGAGATCGAGGAGCTCCGGCGAATGCTGCTATCTTACGCTGGTGTGTACC
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consensus GCCGGAGGATGGAGATCGAGGAGCTCCGGCGAATGCTGCTATCTTACGCTGGTGTGTACC
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JMSF033B12- GGAGGAAGGATGAAGAAGCGTTCAGATTGTCCGGACCGGATGCCTCTTGAGCAAGACGAC
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consensus GGAGGAAGGATGAAGAAGCGTTCAGATTGTCCGGACCGGATGCCTCTTGAGCAAGACGAC
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JMSF033B12- AAACTGGTGTGCGTTATCGGAGGCGTTCCCTACCTCGGGATCGCTATTGTGAACCAGCTC
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consensus AAACTGGTGTGCGTTATCGGAGGCGTTCCCTACCTCGGGATCGCTATTGTGAACCAGCTC
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JMSF033B12- CTGCTCCGAGGCTACTCCGTCCGGATCCTCGTCGACAACGAAGAGGATCTGGACAAGCTG
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consensus CTGCTCCGAGGCTACTCCGTCCGGATCCTCGTCGACAACGAAGAGGATCTGGACAAGCTG
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JMSF033B12- AGGGAGATGGAAAATTCTGGTGAAATGAGAGGCCCAAACAACAGCAACGTGGTGGAGGGA
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consensus AGGGAGATGGAAAATTCTGGTGAAATGAGAGGCCCAAACAACAGCAACGTGGTGGAGGGA
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JMSF033B12- GTAATGGCAAGGCTAACTGAAGTTGAAGATTTATCAGAGGCCTTCAATGGTTGTCGTGGC
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consensus GTAATGGCAAGGCTAACTGAAGTTGAAGATTTATCAGAGGCCTTCAATGGTTGTCGTGGC
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JMSF033B12- GTATTCCAAACTGCTGCCTTTATTGATCCGGCTGGGCTATCTGGTTATTCTAAATCCATG
JMFF047I03- AAATCCATG
rJMSF033B12+ AAATCCATG
rJMFF018P10+ AAATCCATG
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consensus GTATTCCAAACTGCTGCCTTTATTGATCCGGCTGGGCTATCTGGTTATTCTAAATCCATG
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JMSF033B12- GCTGAAGTTGAAGTGATGGCTAGCAAGAACGTTCTAGAGGCATGTGCAAGTACATCATCG
JMFF047I03- GCTGAAGTTGAAGTGATGGCTAGCAAGAACGTTCTAGAGGCATGTGCAAGTACATCATCG
rJMSF033B12+ GCTGAAGTTGAAGTGATGGCTAGCAAGAACGTTCTAGAGGCATGTGCAAGTACATCATCG
rJMFF018P10+ GCTGAAGTTGAAGTGATGGCTAGCAAGAACGTTCTAGAGGCATGTGCAAGTACATCATCG
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consensus GCTGAAGTTGAAGTGATGGCTAGCAAGAACGTTCTAGAGGCATGTGCAAGTACATCATCG
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JMSF033B12- GTTAGATACTGTGTGCTTACATCCTCACTCCTAACATGCATATGGCAAGACCACTGTCTC
JMFF047I03- GTTAGATACTGTGTGCTTACATCCTCACTTCTAACATGCATATGGCAAGACCACTGTCTC
rJMSF033B12+ GTTAGATACTGTGTGCTTACATCCTCACTCCTAACATGCATATGGCAAGACCACTGTCTC
rJMFF018P10+ GTTAGATACTGTGTGCTTACATCCTCACTTCTAACATGCATATGGCAAGACCACTGTCTC
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consensus GTTAGATACTGTGTGCTTACATCCTCACTTCTAACATGCATATGGCAAGACCACTGTCTC
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JMSF033B12- AACAACACATCTCGCAGAATTGACCATGAA
JMFF047I03- AACAACACATCTCGCAGAATTGACCATGAAAGCTGGAGCAATGACTCTATCTGCACAACT
rJMSF033B12+ AACAACACATCTCGCAGAATTGACCATGAAAGCTGGAGCAATGACTCTATCTGCACAACT
rJMFF018P10+ AACAACACATCTCGCAGAATTGACCATGAAAGCTGGAGCAATGACTCTATCTGCACAACT
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consensus AACAACACATCTCGCAGAATTGACCATGAAAGCTGGAGCAATGACTCTATCTGCACAACT
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JMFF047I03- AAAAAGCTTTGGTATGCCTTGGGGAAACTGAGGGCAGAAAGGGCTGCGTGGGAAATAGCC
rJMSF033B12+ AAAAAGCTTTGGTATGCCTTGGGGAAACTGAGGGCAGAAAGGGCTGCGTGGGAAATAGCC
rJMFF018P10+ AAAAAGCTTTGGTATGCCTTGGGGAAACTGAGGGCAGAAAGGGCTGCGTGGGAAATAGCC
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consensus AAAAAGCTTTGGTATGCCTTGGGGAAACTGAGGGCAGAAAGGGCTGCGTGGGAAATAGCC
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JMFF047I03- AAGGAGACTGGATTGAAGCTGGCAACTATTTGCCCAGNGCTCATCACGGGTCCTGAATTT
rJMSF033B12+ AAGGAGACTGGATTGAAGCTGGCAACTATTTGCCCAGGGCTCATCACGGGTCCTGAATTT
rJMFF018P10+ AAGGAGACTGGATTGAAGCTGGCAACTATTTGCCCAGGGCTCATCACGGGTCCTGAATTT
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consensus AAGGAGACTGGATTGAAGCTGGCAACTATTTGCCCAGGGCTCATCACGGGTCCTGAATTT
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JMFF047I03- CGTAACAGGAATCCAACTCCTACNATTGCTTATCTCNAAGGAGCTC
rJMSF033B12+ CGTAACAGGAATCCAACTCCTACAATTGCTTATCTCAAAGGAGCTCGGGAAATGTACAGA
rJMFF018P10+ CGTAACAGGAATCCAACTCCTACAATTGCTTATCTCAAAGGAGCTCGGGAAATGTACAGA
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consensus CGTAACAGGAATCCAACTCCTACAATTGCTTATCTCAAAGGAGCTCGGGAAATGTACAGA
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rJMSF033B12+ AAGGGACTACTCGCAACTGTAGATGTAAACGCCTTAGCGAAGGCGCATGTAACAGTGTAC
rJMFF018P10+ AAGGGACTACTCGCAACTGTAGATGTAAACGCCTTAGCGAAGGCGCATGTAACAGTGTAC
rJMFF047I03+ ACTCGCAACTGTAGATGTAAACGCCTTAGCGAAGGCGCATGTAACAGTGTAC
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consensus AAGGGACTACTCGCAACTGTAGATGTAAACGCCTTAGCGAAGGCGCATGTAACAGTGTAC
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rJMSF033B12+ GAGGAGATGAAGAACACGGCACACGGGAGATATGTTTGCTTCAACAAAGTTCTAACCACC
rJMFF018P10+ GAGGAGATGAAGAACACAGCACACGGGAGATATGTTTGCTTCAACAAAGTTCTAACCACC
rJMFF047I03+ GAGGAGATGAAGAACACAGCACACGGGAGATATGTTTGCTTCAACAAAGTTCTAACCACC
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consensus GAGGAGATGAAGAACACAGCACACGGGAGATATGTTTGCTTCAACAAAGTTCTAACCACC
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rJMSF033B12+ CCAGAAGAAGTTGAAAACCTGGCAAGAGAAACAGGAATTGATATTGGCACCATTATAGAC
rJMFF018P10+ CCAGAAGAAGTTGAAAACCTGGCAAGAGAAACAGGAATTGATATTGGCACCATTATAGAC
rJMFF047I03+ CCAGAAGAAGTTGAAAACCTGGCAAGAGAAACAGGAATTGATATTGGCACCATTATAGAC
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consensus CCAGAAGAAGTTGAAAACCTGGCAAGAGAAACAGGAATTGATATTGGCACCATTATAGAC
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rJMSF033B12+ GACGATGATGCATTAAACGACCCAGATAGTAGTAAAGACAGGATACAACTATCAGATTTA
rJMFF018P10+ GACGATGATGCATTAAACGACCCAGATAGTAGTAAAGACAGGATCCAACTATCAGATTTA
rJMFF047I03+ GACGATGATGCATTAAACGACCCAGATAGTAGTAAAGACAGGATCCAACTATCAGATTTA
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consensus GACGATGATGCATTAAACGACCCAGATAGTAGTAAAGACAGGATCCAACTATCAGATTTA
. : . : . : . : . : . :
rJMSF033B12+ AAGCTAAATCGCCTAATGTCACGAACCTTTAGATGTCT
rJMFF018P10+ AAGCTAAATCGCCTAATGTCACGAACCTTTAGATGTCTTGACTACTTAAACTAAATTATT
rJMFF047I03+ AAGCTAAATCGCCTAATGTCACGAACCTTTAGATGTCTTGACTACTTAAACTAAATTATT
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consensus AAGCTAAATCGCCTAATGTCACGAACCTTTAGATGTCTTGACTACTTAAACTAAATTATT
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rJMFF018P10+ GATCGCACTCAAGATGAATTTTGGCATTCAATATTCGTTGTTATAAATAATATTT
rJMFF047I03+ GATCGCACTCAAGATGAATTTTGGCATTCAATATTCGTTGTTATAAATAATATTTTCAAT
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consensus GATCGCACTCAAGATGAATTTTGGCATTCAATATTCGTTGTTATAAATAATATTTTCAAT
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rJMFF047I03+ AAAATAATTTTATATTTTACAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
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consensus AAAATAATTTTATATTTTACAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG