Contig 011190:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025D05Sequence608011190 (11)ref|XP_006358577.1|2e-55PREDICTED: tobamovirus multiplication protein 2A-like isoform X1 [Solanum tuber777011190 (11)ref|XP_004245872.1|2e-57PREDICTED: tobamovirus multiplication protein 2A [Solanum lycopersicum]
JMFF032C05Sequence764011190 (11)ref|XP_004245872.1|5e-58PREDICTED: tobamovirus multiplication protein 2A [Solanum lycopersicum]
JMFF035I10Sequence421011190 (11)ref|XP_009590611.1|8e-22PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref751011190 (11)ref|XP_009590611.1|3e-56PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref
JMFF038K17Sequence420011190 (11)ref|XP_009590611.1|4e-24PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref295011190 (11)
JMFF046L22Sequence419011190 (11)ref|XP_009590611.1|8e-22PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref402011190 (11)gb|KHG01123.1|2e-13hypothetical protein F383_00667 [Gossypium arboreum]
JMSF003A12Sequence787011190 (11)ref|XP_004245872.1|2e-67PREDICTED: tobamovirus multiplication protein 2A [Solanum lycopersicum]
JMSF013M06Sequence786011190 (11)ref|XP_004245872.1|1e-58PREDICTED: tobamovirus multiplication protein 2A [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF038K17- CCTTTGCAATCTGTCAACCCCGTGATCTCTCCTACTCCCTGTTCACAAACATG
JMFF035I10- ACCCCGTGATCTCTCCTACTCCCTGTTCACAAACATG
JMFF046L22- ACCCCGTGATCTCTCCTACTCCCTGTTCAC-AACATG
JMFF025D05- ACCCCGTGATCTCTCCTACTCCCTGTTCACAAACATG
                      ____________________________________________________________
consensus CCTTTGCAATCTGTCAACCCCGTGATCTCTCCTACTCCCTGTTCACAAACATG
 
. : . : . : . : . : . :
JMFF038K17- AGGATTTTGTGATTTAGCTGAGAGTTGTGCAAGGAGCTTTGAGTTGTGGGGGTTTGCTAG
JMFF035I10- AGGATTTTGTGATTTAGCTGAGAGTTGTGCAAGGAGCTTTGAGTTGTGGGGGTTTGCTAG
JMFF046L22- AGGATTTTGTGATTTAGCTGAGAGTTGTGCAAGGAGCTTTGAGTTGTGGGGGTTTGCTAG
JMFF025D05- AGGATTTTGTGATTTAGCTGAGAGTTGTGCAAGGAGCTTTGAGTTGTGGGGGTTTGCTAG
                      ____________________________________________________________
consensus AGGATTTTGTGATTTAGCTGAGAGTTGTGCAAGGAGCTTTGAGTTGTGGGGGTTTGCTAG
 
. : . : . : . : . : . :
JMFF038K17- AATTTTCTAGAGAATGGCGTGTAAAGGGTGTTTGGAGTGCTTGCTGAAGCTCTTTAACTT
JMFF035I10- AATTTTCTAGAGAATGGCGTGTAAAGGGTGTTTGGAGTGCTTGCTGAAGCTCTTTAACTT
JMFF046L22- AATTTTCTAGAGAATGGCGTGTAAAGGGTGTTTGGAGTGCTTGCTGAAGCTCTTTAACTT
JMFF025D05- AATTTTCTAGAGAATGGCGTGTAAAGGGTGTTTGGAGTGCTTGCTGAAGCTCTTTAACTT
                      ____________________________________________________________
consensus AATTTTCTAGAGAATGGCGTGTAAAGGGTGTTTGGAGTGCTTGCTGAAGCTCTTTAACTT
 
. : . : . : . : . : . :
JMFF038K17- CTTATTGACCCTTGTTGGACTGGGAATGATTGGATATGGTGTATATCTCTTTGTGGAATA
JMFF035I10- CTTATTGACCCTTGTTGGACTGGGAATGATTGGATATGGTGTATATCTCTTTGTGGAATA
JMFF046L22- CTTATTGACCCTTGTTGGACTGGGAATGATTGGATATGGTGTATATCTCTTTGTGGAATA
JMFF025D05- CTTATTGACCCTTGTTGGACTGGGAATGATTGGATATGGTGTATATCTCTTTGTGGAATA
                      ____________________________________________________________
consensus CTTATTGACCCTTGTTGGACTGGGAATGATTGGATATGGTGTATATCTCTTTGTGGAATA
 
. : . : . : . : . : . :
JMFF038K17- CAAAAACCACTCTTCATCTGGTGATATTGAGCCTCCGTCGAGTTTTGAAGTGATGCAGCT
JMFF035I10- CAAAAACCACTCTTCATCTGGTGATATTGAGCCTCCGTCGAGTTTTGAAGTGATGCAGCT
JMFF046L22- CAAAAACCACTCTTCATCTGGTGATATTGAGCCTCCGTCGAGTTTTGAAGTGATGCAGCT
JMFF025D05- CAAAAACCACTCTTCATCTGGTGATATTGAGCCTCCGTCGAGTTTTGAAGTGATGCAGCT
                      ____________________________________________________________
consensus CAAAAACCACTCTTCATCTGGTGATATTGAGCCTCCGTCGAGTTTTGAAGTGATGCAGCT
 
. : . : . : . : . : . :
JMFF038K17- AGGTCGCCCTATGCTTATGGCTGTATCTTTCGCAAACAACATATTCGATAACCTCCCAAA
JMFF035I10- AGGTCGCCCTATGCTTATGGCTGTATCTTTCGCAAACAACATATTCGATAACCTCCCAAA
JMFF046L22- AGGTCGCCCTATGCTTATGGCTGTATCTTTCGCAAACAACATATTCGATAACCTCCCAAA
JMFF025D05- AGGTCGCCCTATGCTTATGGCTGTATCTTTCGCAAACAACATATTCGATAACCTCCCAAA
                      ____________________________________________________________
consensus AGGTCGCCCTATGCTTATGGCTGTATCTTTCGCAAACAACATATTCGATAACCTCCCAAA
 
. : . : . : . : . : . :
JMFF038K17- TGCTTGGTTCATATATTTGTTTATTGGTATCGGCGTAGTTATTTGNGTAATATCTTGCTT
JMFF035I10- TGCTTGGTTCATATATTTGTTTATTGGTATCGGCGTAGTTATTTGTGTAATATCTTGCTT
JMFF046L22- TGCTTGGTTCATATATTTGTTTATTGGTATCGGCGTAGTTATTTGTGTAATATCTTGCTT
JMFF025D05- TGCTTGGTTCATATATTTGTTTATTGGTATCGGCGTAGTTATTTGTGTAATATCTTGCTT
                      ____________________________________________________________
consensus TGCTTGGTTCATATATTTGTTTATTGGTATCGGCGTAGTTATTTGTGTAATATCTTGCTT
 
. : . : . : . : . : . :
JMFF038K17- TGGCTGC
JMFF035I10- TGGCTGC
JMFF046L22- TGGCTGC
JMFF025D05- TGGCTGCATTGGAGGTGCGACGAGGAATGGGTGCTGCCTGTCTTGTTATTCTGTGTTAGT
rJMSF003A12+ GTTAGT
rJMFF032C05+ GTTAGT
rJMFF025D05+ GTTAGT
                      ____________________________________________________________
consensus TGGCTGCATTGGAGGTGCGACGAGGAATGGGTGCTGCCTGTCTTGTTATTCTGTGTTAGT
 
. : . : . : . : . : . :
JMFF025D05- AATGTTGTTGATCTTGGTAGAACTTGGAGCTGCTGCATTTATATTCTTTGACAAAAGTTG
rJMSF003A12+ AATGTTGTTGATCTTGGTAGAACTNGGAGCTGCTGCATTTATATTCTTTGACAAAAGTTG
rJMFF032C05+ AATGTTGTTGATCTTGGTAGAACTTGGAGCTGCTGCATTTATATTCTTTGACAAAAGTTG
rJMFF035I10+ GGTAGAACTTGGAGCTGCTGCATTTATATTCTTTGACAAAAGTTG
rJMSF013M06+ TGATCNTGGTAGAACTTGGAGCTGCTGCATTTATATTCTTTGACAAAAGTTG
rJMFF025D05+ AATGTTGTTGATCTTGGTAGAACTNGGAGCTGCTGCATTTATATTCTTTGACAAAAGTNG
                      ____________________________________________________________
consensus AATGTTGTTGATCTTGGTAGAACTTGGAGCTGCTGCATTTATATTCTTTGACAAAAGTTG
 
. : . : . : . : . : . :
JMFF025D05- GAAGAAGGAAATTCCAACAGACAAAACGGGTAACTTTGATACGATATATGAATTTTTGGA
rJMSF003A12+ GAAGAAGGAAATTCCAACAGACAAAACGGGTAACTTTGATACGATATATGAATTTTTGGA
rJMFF032C05+ GAAGAAGGAAATTCCAACAGACAAAACGGGTAACTTTGATACGATATATGAATTTTTGGA
rJMFF035I10+ GAAGAAGGAAATTCCAACAGACAAAACGGGTAACTTTGATACGATATATGAATTTTTGGA
rJMSF013M06+ GAAGAAGGAAATTCCAACAGACAAAACGGGTAACTTTGATACGATATATGAATTTTTGGA
rJMFF025D05+ GAAGAAGGAAATTCCAACAGACAAAACGGGTAACTTTGATACGATATATGAATTTTTGGA
                      ____________________________________________________________
consensus GAAGAAGGAAATTCCAACAGACAAAACGGGTAACTTTGATACGATATATGAATTTTTGGA
 
. : . : . : . : . : . :
JMFF025D05- AGACCACTGGGACAT
rJMSF003A12+ AGACCACTGGGACATTGCTAGATGGGTGGCCCTTGGGGCAGTAGTGTTGGAGGCCCTTGT
rJMFF032C05+ AGACCACTGGGACATTGCTAGATGGGTGGCCCTTGGGGCAGTAGTGTTGGAGGCCCTTGT
rJMFF035I10+ AGACCACTGGGACATTGCTAGATGGGTGGCCCTTGGGGCAGTAGTGTTGGAGGCCCTTGT
rJMSF013M06+ AGACCACTGGGACATTGCTAGATGGGTGGCCCTTGGGGCAGTAGTGTTGGAGGCCCTTGT
rJMFF025D05+ AGACCACTGGGACATTGCTAGATGGGTGGCCCTTGGGGCAGTAGTGTTGGAGGCCCTTGT
                      ____________________________________________________________
consensus AGACCACTGGGACATTGCTAGATGGGTGGCCCTTGGGGCAGTAGTGTTGGAGGCCCTTGT
 
. : . : . : . : . : . :
rJMSF003A12+ ATTCTTGTTGGCACTTGTGGTAAGGGCAGCGAACAGACCGGCCGACTATGATAGCGATGA
rJMFF032C05+ ATTCTTGTTGGCACTTGTGGTAAGGGCAGCGAACAGACCGGCCGACTATGATAGCGATGA
rJMFF035I10+ ATTCTTGTTGGCACTTGTGGTAAGGGCAGCGAACAGACCGGCCGACTATGATAGCGATGA
rJMSF013M06+ ATTCTTGTTGGCACTTGTGGTAAGGGCAGCGAACAGACCGGCCGACTATGATAGCGATGA
rJMFF025D05+ ATTCTTGTTGGCACTTGTGGTAAGGGCAGCGAACAGACCGGCCGACTATGATAGCGATGA
                      ____________________________________________________________
consensus ATTCTTGTTGGCACTTGTGGTAAGGGCAGCGAACAGACCGGCCGACTATGATAGCGATGA
 
. : . : . : . : . : . :
rJMSF003A12+ TGAGTATATAGGCGGCGGTCCTAGACAACAGATCCGCCAGCCACTGGTTAACAACAACTG
rJMFF032C05+ TGAGTATATAGGCGGCGGTCCTAGGCAACAGATCCGCCAGCCACTGGTTAACAACAACTG
rJMFF035I10+ TGAGTATATAGGCGGCGGTCCTAGACAACAGATCCGCCAGCCACTGGTTAACAACAACTG
rJMSF013M06+ TGAGTATATAGGCGGCGGTCCTAGACAACAGATCCGCCAGCCACTGGTTAACAACAACTG
rJMFF025D05+ TGAGTATATAGGCGGCGGTCCTAGACAACAGATCCGCCAGCCACTGGTTAACAACAACTG
                      ____________________________________________________________
consensus TGAGTATATAGGCGGCGGTCCTAGACAACAGATCCGCCAGCCACTGGTTAACAACAACTG
 
. : . : . : . : . : . :
rJMSF003A12+ GCAATCCTCTAGCCCTCAAAGCGCACCTGTTGCTGCTGACTCTCGGGCGCCTAGTCGGAC
rJMFF032C05+ GCAATCCTCTAGCCCTCAAAGCGCACCTGTTGCTGCTGACTCTCGGGCGCCTAGTCGGAC
rJMFF035I10+ GCAATCCTCTAGCCCTCAAAGCGCACCTGTTGCTGCTGACTCTCGGGCGCCTAGTCGGAC
rJMSF013M06+ GCAATCCTCTAGCCCTCAAAGCGCACCTGTTGCTGCTGACTCTCGGGCGCCTAGTCGGAC
rJMFF025D05+ GCAATCCTCTAGCCCTCAAAGCGCACCTGTTGCTGCTGACTCTCGGGCGCCTAGTCGGAC
                      ____________________________________________________________
consensus GCAATCCTCTAGCCCTCAAAGCGCACCTGTTGCTGCTGACTCTCGGGCGCCTAGTCGGAC
 
. : . : . : . : . : . :
rJMSF003A12+ TGATGCATGGAGTGCTCGTATGAGGGAAAAGTACGGGCTTGACACTTCGGAGTTTACATA
rJMFF032C05+ TGATGCATGGAGTGCTCGTATGAGGGAAAAGTACGGGCTTGACACTTCGGGGTTTACATA
rJMFF035I10+ TGATGCATGGAGTGCTCGTATGAGGGAAAAGTACGGGCTTGACACTTCGGAGTTTACATA
rJMSF013M06+ TGATGCATGGAGTGCTCGTATGAGGGAAAAGTACGGGCTTGACACTTCGGAGTTTACATA
rJMFF025D05+ TGATGCATGGAGTGCTCGTATGAGGGAAAAGTACGGGCTTGACACTTCGGAGTTTACATA
rJMFF046L22+ TATGAGGGAAAAGTACGGGCTTGACACTTCGGAGTTTACATA
                      ____________________________________________________________
consensus TGATGCATGGAGTGCTCGTATGAGGGAAAAGTACGGGCTTGACACTTCGGAGTTTACATA
 
. : . : . : . : . : . :
rJMSF003A12+ CAATCCATCGGAGCCAAACCGGCACCAACAAACAGCTGCACAACCTCCAGAGGAGAGTAG
rJMFF032C05+ CAATCCATCGGAGCCAAACCGGCACCAACAAACAGCTGCACAACCTCCAGAGGAGAGTAG
rJMFF035I10+ CAATCCATCGGAGCCAAACCGGCACCAACAAACAGCTGCACAACCTCCAGAGGAGAGTAG
rJMSF013M06+ CAATCCATCGGAGCCAAACCGGCACCAACAAACAGCTGCACAACCTCCAGAGGAGAGTAG
rJMFF038K17+ AAACAGCTGCACAACCTCCAGAGGAGAGTAG
rJMFF025D05+ CAATCCATCGGAGCCAAACCGGCACCAACAAACAGCTGCACAACCTCCAGAGGAGAGTAG
rJMFF046L22+ CAATCCATCGGAGCCAAACCGGCACCAACAAACAGCTGCACAACCTCCAGAGGAGAGTAG
                      ____________________________________________________________
consensus CAATCCATCGGAGCCAAACCGGCACCAACAAACAGCTGCACAACCTCCAGAGGAGAGTAG
 
. : . : . : . : . : . :
rJMSF003A12+ TCGATGTACTATAATGTGACGATATAATATGGTTTGCGTCGTGGAGCAACCGTGTTGTTA
rJMFF032C05+ TCGATGTACTATAATGTGACGATATAATATGGTTTGCGTCGTGGAGCAACCGTGTTGTTA
rJMFF035I10+ TCGATGTACTATAATGTGACGATATAATATGGTTTGCGTCGTGGAGCAACCGTGTTGTTA
rJMSF013M06+ TCGATGTACTATAATGTGACGATATAATATGGTTTGCGTCGTGGAGCAACCGTGTTGTTA
rJMFF038K17+ TNGATGTACTATAATGTGACGATATAATATGGTTTGCGTCGTGGAGCAACCGTGTTGTTA
rJMFF025D05+ TCGATGTACTATAATGTGACGATATAATATGGTTTGCGTCGTGGAGCAACCGTGTTGTTA
rJMFF046L22+ TCGATGTACTATAATGTGACGATATAATATGGTTTGCGTCGTGGAGCAACCGTGTTGTTA
                      ____________________________________________________________
consensus TCGATGTACTATAATGTGACGATATAATATGGTTTGCGTCGTGGAGCAACCGTGTTGTTA
 
. : . : . : . : . : . :
rJMSF003A12+ TTCATGTTCGCTTTTGAGTTGATTTCTTTTAGTTGATCGTATGGTTGTTTGTATCTATCC
rJMFF032C05+ TTCATGTTCGCTTTTGAGTTGATTTCTTTTAGTTGATCGTATGGTTGTTTGTATCTATCC
rJMFF035I10+ TTCATGTTCGCTTTTGAGTTGATTTCTTTTAGTTGATCGTATGGTTGTTTGTATCTATCC
rJMSF013M06+ TTCATGTTCGCTTTTGAGTTGATTTCTTTTAGTTGATCGTAAGGTTGTTTGTATCTATCC
rJMFF038K17+ TTCATGTTCGCTTTTGAGTTGATTTCTTTTAGTTGATCGTATGGTTGTTTGTATCTATCC
rJMFF025D05+ TTCATGTTCGCTTTTGAGTTGATTTCTTTTAGTTGATCGTATGGTTGTTTGTATCTATCC
rJMFF046L22+ TTCATGTTCGCTTTTGAGTTGATTTCTTTTAGTTGATCGTATGGTTGTTTGTATCTATCC
                      ____________________________________________________________
consensus TTCATGTTCGCTTTTGAGTTGATTTCTTTTAGTTGATCGTATGGTTGTTTGTATCTATCC
 
. : . : . : . : . : . :
rJMSF003A12+ CTCTGTTATGGAGTTAGTGTAAAAATCGAGTCTTTT-CCGGTTTATTATTTGGTATCTTT
rJMFF032C05+ CTCTGTTATGGAGTTAGTGTAAAAATCGAGTCTTTTGCGGGTTTATTATTTGGTATCTTT
rJMFF035I10+ CTCTGTTATGGAGTTAGTGTAAAAATCGAGTCTTTTGCGGGTTTATTATTTGGTATCTTT
rJMSF013M06+ CTCTGTTATGGAGTTAGTGTAAAAATCGAGTCTTTTGCGGGTTTATTATTTGGTATCTTT
rJMFF038K17+ CTCTGTTATGGAGTTAGTGTAAAAATCGAGTCTTTTGCGGGTTTATTATTTGGTATCTTT
rJMFF025D05+ CTCTGTTATGGAGTTAGTGTAAAAATCGAGTCTTTTGCGGGTTTATTATTTGGTATCTTT
rJMFF046L22+ CTCTGTTATGGAGTTAGTGTAAAAATCGAGTCTTTTGCGGGTTTATTATTTGGTATCTTT
                      ____________________________________________________________
consensus CTCTGTTATGGAGTTAGTGTAAAAATCGAGTCTTTTGCGGGTTTATTATTTGGTATCTTT
 
. : . : . : . : . : . :
rJMSF003A12+ TGTTTGGTCGTTGTGTACGATGTACAAATTGAATGTTTTGTGAATTTATGTTGTCTTGTG
rJMFF032C05+ TGTTTGGTCGTTGTGTACGATGTACAAATTGAATGTTTTGTGAATTTATGTTGTCTTGTG
rJMFF035I10+ TGTTTGGTCGTTGTGTACGATGTACAAATTGAATGTTTTGTGAATTTATGTTGTCTTGTG
rJMSF013M06+ TGTTTGGTCGTTGTGTACGATGTACAAATTGAATGTTTTGTGAATTTATGTTGTCTTGTG
rJMFF038K17+ TGTTTGGTCGTTGTGTACGATGTACAAATTGAATGTTTTGTGAATTTATGTTGTCTTGTG
rJMFF025D05+ TGTTTGGTCGTTGTGTACGATGTACAAATTGAATGTTTTGTGAATTTATGTTGTCTTGTG
rJMFF046L22+ TGTTTGGTCGTTGTGTACGATGTACAAATTGAATGTTTTGTGAATTTATGTTGTCTTGTG
                      ____________________________________________________________
consensus TGTTTGGTCGTTGTGTACGATGTACAAATTGAATGTTTTGTGAATTTATGTTGTCTTGTG
 
. : . : . : . : . : . :
rJMSF003A12+ TTCTCTCTAAATT
rJMFF032C05+ TTCTCTCTAAATTTCGAGAGACGTTTCTTTTTATTAAA
rJMFF035I10+ TTCTCTCTAAATTTCGAGAGACGT
rJMSF013M06+ TTCTCTCTAAATTTCGAGAGACGTT
rJMFF038K17+ TTCTCTCTAAATTTCGAGAGACGT
rJMFF025D05+ TTCTCTCTAAATTTCGAGAGACGTTTCTTTTTATTAAATGGTT
rJMFF046L22+ TTCTCTCTAAATTTCGAGAGACGTTTCTTTTTATTAAATGGTTTGAGAGTTTATTTTGCC
                      ____________________________________________________________
consensus TTCTCTCTAAATTTCGAGAGACGTTTCTTTTTATTAAATGGTTTGAGAGTTTATTTTGCC