| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004J16 | Sequence | 580 | 011188 (22) | ref|XP_009803358.1| | 1e-81 | PREDICTED: 30S ribosomal protein S1, chloroplastic [Nicotiana sylvestris] | 740 | 011188 (22) | gb|KJB28781.1| | 2e-124 | hypothetical protein B456_005G069200 [Gossypium raimondii] |
| JMFF035O10 | Sequence | 572 | 011188 (22) | ref|XP_009803358.1| | 3e-89 | PREDICTED: 30S ribosomal protein S1, chloroplastic [Nicotiana sylvestris] | 696 | 011188 (22) | gb|KHG12802.1| | 5e-115 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gossypium arboreum] |
| JMFF046K06 | Sequence | 591 | 011188 (22) | ref|XP_009803358.1| | 3e-95 | PREDICTED: 30S ribosomal protein S1, chloroplastic [Nicotiana sylvestris] | 520 | 011188 (22) | gb|KHG12802.1| | 3e-56 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gossypium arboreum] |
| JMSF016F20 | Sequence | 242 | 011188 (22) | ref|XP_009803358.1| | 1e-10 | PREDICTED: 30S ribosomal protein S1, chloroplastic [Nicotiana sylvestris] | 740 | 011188 (22) | gb|KJB28781.1| | 6e-136 | hypothetical protein B456_005G069200 [Gossypium raimondii] |
| JMSF019O13 | Sequence | 504 | 011188 (22) | ref|XP_009803358.1| | 1e-63 | PREDICTED: 30S ribosomal protein S1, chloroplastic [Nicotiana sylvestris] | 745 | 011188 (22) | gb|KJB28782.1| | 6e-129 | hypothetical protein B456_005G069200 [Gossypium raimondii] |
| JMSF024G07 | Sequence | 668 | 011188 (22) | ref|XP_004229034.1| | 1e-101 | PREDICTED: 30S ribosomal protein S1, chloroplastic [Solanum lycopersicum] | 733 | 011188 (22) | gb|KJB28782.1| | 8e-128 | hypothetical protein B456_005G069200 [Gossypium raimondii] |
| JMSF025L10 | Sequence | 691 | 011188 (22) | ref|XP_004229034.1| | 3e-106 | PREDICTED: 30S ribosomal protein S1, chloroplastic [Solanum lycopersicum] | 712 | 011188 (22) | gb|KHG12802.1| | 1e-124 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gossypium arboreum] |
| JMSF044C08 | Sequence | 767 | 011188 (22) | ref|XP_010270863.1| | 3e-121 | PREDICTED: 30S ribosomal protein S1, chloroplastic [Nelumbo nucifera] | 735 | 011188 (22) | gb|KHG12802.1| | 2e-124 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Gossypium arboreum] |
| JMSF047F10 | Sequence | 708 | 011188 (22) | ref|XP_004229034.1| | 3e-108 | PREDICTED: 30S ribosomal protein S1, chloroplastic [Solanum lycopersicum] | 745 | 011188 (22) | gb|KJB28782.1| | 6e-129 | hypothetical protein B456_005G069200 [Gossypium raimondii] |
| JMSF048K13 | Sequence | 695 | 011188 (22) | ref|XP_004229034.1| | 5e-107 | PREDICTED: 30S ribosomal protein S1, chloroplastic [Solanum lycopersicum] | 738 | 011188 (22) | gb|KJB28782.1| | 6e-127 | hypothetical protein B456_005G069200 [Gossypium raimondii] |
| JMSF051A05 | Sequence | 666 | 011188 (22) | ref|XP_004229034.1| | 9e-100 | PREDICTED: 30S ribosomal protein S1, chloroplastic [Solanum lycopersicum] | 746 | 011188 (22) | gb|KJB28782.1| | 6e-129 | hypothetical protein B456_005G069200 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
JMSF051A05- GCTAACGAAAAATTATCTTCCTCCTCAGTCCTC
JMSF016F20- AGTCCTC
JMSF024G07- ACGAAAAATTATCTTCCTCCTCAGTCCTC
JMFF004J16- AACGAAAAATTATCTTCCTCCTCAGTCCTC
JMSF019O13- AACGAAAAATTATCTTCCTCCTCAGTCCTC
JMSF025L10- AACGAAAAATTATCTTCCTCCTCAGTCCTC
JMSF048K13- ACGAAAAATTATCTTCCTCCTCAGTCCTC
JMSF047F10- AACGAAAAATTATCTTCCTCCTCAGTCCTC
JMSF044C08- AGTCCTC
____________________________________________________________
consensus GCTAACGAAAAATTATCTTCCTCCTCAGTCCTC
. : . : . : . : . : . :
JMSF051A05- ACCCACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
JMFF046K06- ACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
JMSF016F20- ACCCACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
JMSF024G07- ACCCACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
JMFF004J16- ACCCACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
JMFF035O10- ACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
JMSF019O13- ACCCACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
JMSF025L10- ACCCACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
JMSF048K13- ACCCACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
JMSF047F10- ACCCACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
JMSF044C08- ACCCACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
____________________________________________________________
consensus ACCCACCCGAAGATACAGAGGAAGAAGAAAGTGAACTCAAATGGCGTCATTCGCTCAGCA
. : . : . : . : . : . :
JMSF051A05- ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
JMFF046K06- ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
JMSF016F20- ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
JMSF024G07- ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
JMFF004J16- ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
JMFF035O10- ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
JMSF019O13- ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
JMSF025L10- ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
JMSF048K13- ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
JMSF047F10- ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
JMSF044C08- ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
____________________________________________________________
consensus ACTCGGTGTGATAAAATGCCCGCCAATCCCGACCACAAGAATTGGTGTCTCCTCTAAGAA
. : . : . : . : . : . :
JMSF051A05- GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
JMFF046K06- GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
JMSF016F20- GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
JMSF024G07- GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
JMFF004J16- GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
JMFF035O10- GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
JMSF019O13- GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
JMSF025L10- GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
JMSF048K13- GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
JMSF047F10- GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
JMSF044C08- GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
____________________________________________________________
consensus GATTATTCAAAGCTATTCTTACAAAAAGCAGCTGAGAGTAGTCTGCCAAGCAGCGGCCGT
. : . : . : . : . : . :
JMSF051A05- GGTAGGCAATGCGCAGACAAGAGAGAGACAGAAGCTTAAAGAGATGTTTGAAGAAGCATA
JMFF046K06- GGTAGGCAATGCGCAGACAAGAGAGAGACAGAAGCTTAAAGAGATGTTTGAAGAAGCATA
JMSF016F20- GGTAGGCAATGCGCAGACCAGAGAGAGACAGAAGCTTAAAGAGATGTTTGAAGA
JMSF024G07- GGTAGGCAATGCGCAGACAAGAGAGAGACAGAAGCTTAAAGAGATGTTTGAAGAAGCATA
JMFF004J16- GGTAGGCAATGCGCAGACAAGAGAGAGACAGAAGCTTAAAGAGATGTTTGAAGAAGCATA
JMFF035O10- GGTAGGCAATGCGCAGACAAGAGAGAGACAGAAGCTTAAAGAGATGTTTGAAGAAGCATA
JMSF019O13- GGTAGGCAATGCGCAGACAAGAGAGAGACAGAAGCTTAAGGAGATGTTTGAAGAAGCATA
JMSF025L10- GGTAGGCAATGCGCAGACAAGAGAGAGACAGAAGCTTAAAGAGATGTTTGAAGAAGCATA
JMSF048K13- GGTAGGCAATGCGCAGACAAGAGAGAGACAGAAGCTTAAAGAGATGTTTGAAGAAGCATA
JMSF047F10- GGTAGGCAATGCGCAGACAAGAGAGAGACAGAAGCTTAAAGAGATGTTTGAAGAAGCATA
JMSF044C08- GGTAGGCAATGCGCAGACAAGAGAGAGACAGAAGCTTAAAGAGATGTTTGAAGAAGCATA
____________________________________________________________
consensus GGTAGGCAATGCGCAGACAAGAGAGAGACAGAAGCTTAAAGAGATGTTTGAAGAAGCATA
. : . : . : . : . : . :
JMSF051A05- CGAGCGGTGCCGCACTGCACCCATGGAAGGTGTCGCTTTCACTCTAGAAGACTTCCACGA
JMFF046K06- CGAGCGGTGCCGCACTGCACCCATGGAAGGTGTCGCTTTCACTCTAGAAGACTTCCACGA
JMSF024G07- CGAGCGGTGCCGCACTGCACCCATGGAAGGTGTCGCTTTCACTCTAGAAGACTTCCACGA
JMFF004J16- CGAGCGGTGCCGCACTGCACCCATGGAAGGTGTCGCTTTCACTCTAGAAGACTTCCACGA
JMFF035O10- CGAGCGGTGCCGCACTGCACCCATGGAAGGTGTCGCTTTCACTCTAGAAGACTTCCACGA
JMSF019O13- CGAGCGGTGCCGCACTGCACCCATGGAAGGTGTCGCTTTCACTCTAGAAGACTTCCACGA
JMSF025L10- CGAGCGGTGCCGCACTGCACCCATGGAAGGTGTCGCTTTCACTCTAGAAGACTTCCACGA
JMSF048K13- CGAGCGGTGCCGCACTGCACCCATGGAAGGTGTCGCTTTCACTCTAGAAGACTTCCACGA
JMSF047F10- CGAGCGGTGCCGCACTGCACCCATGGAAGGTGTCGCTTTCACTCTAGAAGACTTCCACGA
JMSF044C08- CGAGCGGTGCCGCACTGCACCCATGGAAGGTGTCGCTTTCACTCTAGAAGACTTCCACGA
____________________________________________________________
consensus CGAGCGGTGCCGCACTGCACCCATGGAAGGTGTCGCTTTCACTCTAGAAGACTTCCACGA
. : . : . : . : . : . :
JMSF051A05- TGCTCTCGATAAGTACGATTTCGATTCCGAAATCGGTACCAAGGTAAAAGGTACAGTGTT
JMFF046K06- TGCTCTCGATAAGTACGATTTCGATTCCGAAATCGGTACCAAGGTAAAAGGTACAGTGTT
JMSF024G07- TGCTCTCGATAAGTACGATTTCGATTCCGAAATCGGTACCAAGGTAAAAGGTACAGTGTT
JMFF004J16- TGCTCTCGATAAGTACGATTTCGATTCCGAAATCGGTACCAAGGTAAAAGGTACAGTGTT
JMFF035O10- TGCTCTCGATAAGTACGATTTCGATTCCGAAATCGGTACCAAGGTAAAAGGTACAGTGTT
JMSF019O13- TGCTCTCGATAAGTACGATTTCGATTCCGAAATCGGTACCAAGGTAAAAGGTACAGTGTT
JMSF025L10- TGCTCTCGATAAGTACGATTTCGATTCCGAAATCGGTACCAAGGTAAAAGGTACAGTGTT
JMSF048K13- TGCTCTCGATAAGTACGATTTCGATTCCGAAATCGGTACCAAGGTAAAAGGTACAGTGTT
JMSF047F10- TGCTCTCGATAAGTACGATTTCGATTCCGAAATCGGTACCAAGGTAAAAGGTACAGTGTT
JMSF044C08- TGCTCTCGATAAGTACGATTTCGATTCCGAAATCGGTACCAAGGTAAAAGGTACAGTGTT
____________________________________________________________
consensus TGCTCTCGATAAGTACGATTTCGATTCCGAAATCGGTACCAAGGTAAAAGGTACAGTGTT
. : . : . : . : . : . :
JMSF051A05- TAGTATAGATGCATATGGAGCTCTAGTTGACATCACTGCCAAATCATCGGCATTCTTGCC
JMFF046K06- TAGTATAGATGCATATGGAGCTCTAGTTGACATCACTGCCAAATCATCGGCATTCTTGCC
JMSF024G07- TAGTATAGATGCATATGGAGCTCTAGTTGACATCACTGCCAAATCATCGGCATTCTTGCC
JMFF004J16- TAGTATAGATGCATATGGAGCTCTAGTTGACATCACTGCCAAATCATCGGCATTCTTGCC
JMFF035O10- TAGTATAGATGCATATGGAGCTCTAGTTGACATCACTGCCAAATCATCGGCATTCTTGCC
JMSF019O13- TAGTATAGATGCATATGGAGCTCTAGTTGACATCACTGCCAAATCATCGGCATTCTTGCC
JMSF025L10- TAGTATAGATGCATATGGAGCTCTAGTTGACATCACTGCCAAATCATCGGCATTCTTGCC
JMSF048K13- TAGTATAGATGCATATGGAGCTCTAGTTGACATCACTGCCAAATCATCGGCATTCTTGCC
JMSF047F10- TAGTATAGATGCATATGGAGCTCTAGTTGACATCACTGCCAAATCATCGGCATTCTTGCC
JMSF044C08- TAGTATAGATGCATATGGAGCTCTAGTTGACATCACTGCCAAATCATCGGCATTCTTGCC
____________________________________________________________
consensus TAGTATAGATGCATATGGAGCTCTAGTTGACATCACTGCCAAATCATCGGCATTCTTGCC
. : . : . : . : . : . :
JMSF051A05- ACTTAGAGAGGCATCTATTCACAATATCAAGAATGTAGAAGAGGCTGGCATAGTTCCTGG
JMFF046K06- ACTTAGAGAGGCATCTATTCACAATATCAAGAATGTAGAAGAGGCTGGTATAGTTCCTGG
JMSF024G07- ACTTAGAGAGGCATCTATTCACAATATCAAGAATGTAGAAGAGGCTGGCATAGTTCCTGG
JMFF004J16- ACTTAGAGAGGCATCTATTCACAATATCAAGAATGTAGAAGAGGCTGGCATAGTTCCTGG
JMFF035O10- ACTTAGAGAGGCATCTATTCACAATATCAAGAATGTAGAAGAGGCTGGTATAGTTCCTGG
JMSF019O13- ACTTAGAGAGGCATCTATTCACAATATCAAGAATGTAGAAGAGGCTGGCATAG
JMSF025L10- ACTTAGAGAGGCATCTATTCACAATATCAAGAATGTAGAAGAGGCTGGCATAGTTCCTGG
JMSF048K13- ACTTAGAGAGGCATCTATTCACAATATCAAGAATGTAGAAGAGGCTGGCATAGTTCCTGG
JMSF047F10- ACTTAGAGAGGCATCTATTCACAATATCAAGAATGTAGAAGAGGCTGGCATAGTTCCTGG
JMSF044C08- ACTTAGAGAGGCATCTATTCACAATATCAAGAATGTAGAAGAGGCTGGCATAGTTCCTGG
____________________________________________________________
consensus ACTTAGAGAGGCATCTATTCACAATATCAAGAATGTAGAAGAGGCTGGCATAGTTCCTGG
. : . : . : . : . : . :
JMSF051A05- TTTACGAGAGGAATTTGTAGTTATTGGTGAAAATGAAGCTGATGATAGTTTGATCTTGAG
JMFF046K06- TTTACGAGAGGAATTTGTAGTTATTGGTGAAAATGAAGCTGATGATAGTTTGATCTTGAG
JMSF024G07- TTTACGAGAGGAATTTGTAGTTATTGGTGAAAATGAAGCTGATGATAGTTTGATCTTGAG
JMFF004J16- TTTACGAGAGGAATTTGTAGTTATTGGTGAAAATGAAGCTGATGATAGTTTGATCTTGAG
JMFF035O10- TTTACGAGAGGAATTTGTAGTTATTGGTGAAAATGAAGCTGATGATAGTTTGATCTTGAG
JMSF025L10- TTTACGAGAGGAATTTGTAGTTATTGGTGAAAATGAAGCTGATGATAGTTTGATCTTGAG
JMSF048K13- TTTACGAGAGGAATTTGTAGTTATTGGTGAAAATGAAGCTGATGATAGTTTGATCTTGAG
JMSF047F10- TTTACGAGAGGAATTTGTAGTTATTGGTGAAAATGAAGCTGATGATAGTTTGATCTTGAG
JMSF044C08- TTTACGAGAGGAATTTGTAGTTATTGGTGAAAATGAAGCTGATGATAGTTTGATCTTGAG
____________________________________________________________
consensus TTTACGAGAGGAATTTGTAGTTATTGGTGAAAATGAAGCTGATGATAGTTTGATCTTGAG
. : . : . : . : . : . :
JMSF051A05- TTTGCGTTCCATCCAATATGACCTTGCCTGGGAACGATGCAGGCAGCTTCAAGCTGAAGA
JMFF046K06- TTTGCGTTCCATCCAATATGACCTTGCCTGGGAACGATGCAGGCAGCTTCAAGCT
JMSF024G07- TTTGCGTTCCATCCAATATGACCTTGCCTGGGAACGATGCAGGCAGCTTCAAGCTGAAGA
JMFF004J16- TTTGCGTTCC
JMFF035O10- TTTGCGTTCCATCCAATATGACCTTGCCTGGGAACG
JMSF025L10- TTTGCGTTCCATCCAATATGACCTTGCCTGGGAACGATGCAGGCAGCTTCAAGCTGAAGA
JMSF048K13- TTTGCGTTCCATCCAATATGACCTTGCCTGGGAACGATGCAGGCAGCTTCAAGCTGAAGA
JMSF047F10- TTTGCGTTCCATCCAATATGACCTTGCCTGGGAACGATGCAGGCAGCTTCAAGCTGAAGA
JMSF044C08- TTTGCGTTCCATCCAATATGACCTTGCCTGGGAACGATGCAGGCAGCTTCAAGCTGAAGA
____________________________________________________________
consensus TTTGCGTTCCATCCAATATGACCTTGCCTGGGAACGATGCAGGCAGCTTCAAGCTGAAGA
. : . : . : . : . : . :
JMSF051A05- TGTTGTTGTCAAAGGGAAGGTAATTGGTGCTAA
JMSF024G07- TGTTGTTGTCAAAGGGAAGGTAATTGGTGCTAATAAA
JMSF025L10- TGTTGTTGTCAAAGGGAAGGTAATTGGTGCTAATAAAGGTGGAGTTGTGGCATTGGTTGA
JMSF048K13- TGTTGTTGTCAAAGGGAAGGTAATTGGTGCTAATAAAGGTGGAGTTGTGGCATTGGTTGA
JMSF047F10- TGTTGTTGTCAAAGGGAAGGTAATTGGTGCTAATAAAGGTGGAGTTGTGGCATTGGTTGA
JMSF044C08- TGTTGTTGTCAAAGGGAAGGTAATTGGTGCTAATAAAGGTGGAGTTGTGGCATTGGTTGA
rJMSF016F20+ CATTGGTTGA
____________________________________________________________
consensus TGTTGTTGTCAAAGGGAAGGTAATTGGTGCTAATAAAGGTGGAGTTGTGGCATTGGTTGA
. : . : . : . : . : . :
JMSF047F10- GGGCGGCCTGCGTGGAT
JMSF044C08- GGGCGGCCTGCGTGGATTTGTTCCATTCTCACAGATCTCAACTAAATCAACTGCAGAGGA
rJMSF016F20+ GGGCGGCCTGCGTGGATTTGTTCCATTCTCACAGATCTCAACTAAATCAACTGCAGAGGA
rJMSF019O13+ CTCACAGATCTCAACTAAATCAACTGCAGAGGA
rJMSF047F10+ CTCACAGATCTCAACTAAATCAACTGCAGAGGA
rJMSF024G07+ TCACAGATCTCAACTAAATCAACTGCAGAGGA
rJMSF051A05+ CTCACAGATCTCAACTAAATCAACTGCAGAGGA
rJMSF048K13+ TCTCAACTAAATCAACTGCAGAGGA
rJMSF044C08+ CAACTGCAGAGGA
rJMSF025L10+ CAACTGCAGAGGA
rJMFF004J16+ AAATCAACTGCAGAGGA
____________________________________________________________
consensus GGGCGGCCTGCGTGGATTTGTTCCATTCTCACAGATCTCAACTAAATCAACTGCAGAGGA
. : . : . : . : . : . :
JMSF044C08- GCTTTTGGGTAAGGAGCTTCCTCTCAAGTTTGTGGAGGT
rJMSF016F20+ GCTTTTGGGTAAGGAGCTTCCTCTCAAGTTTGTGGAGGTTGATGAAGAGCAGTCTAGACT
rJMSF019O13+ GCTTTTGGGTAAGGAGCTTCCTCTCAAGTTTGTGGAGGTTGATGAAGAGCAGTCTAGACT
rJMSF047F10+ GCTTTTGGGTAAGGAGCTTCCTCTCAAGTTTGTGGAGGTTGATGAAGAGCAGTCTAGACT
rJMSF024G07+ GCTTTTGGGTAAGGTGCTTCCTCTCAAGTTTGTGGAGGTTGATGAAGAGCAGTCTAGACT
rJMSF051A05+ GCTTTTGGGTAAGGAGCTTCCTCTCAAGTTTGTGGAGGTTGATGAAGAGCAGTCTAGACT
rJMSF048K13+ GCTTTTGGGTAAGGAGCTTCCTCTCAAGTTTGTGGAGGTTGATGAAGAGCAGTCTAGACT
rJMSF044C08+ GCTTTTGGGTAAGGAGCTTCCTCTCAAGTTTGTGGAGGTTGATGAAGAGCAGTCTAGACT
rJMSF025L10+ GCTTTTGGGTAAGGAGCTTCCTCTCAAGTTTGTGGAGGTTGATGAAGAGCAGTCTAGACT
rJMFF004J16+ GCTTTTGGGTAAGGAGCTTCCTCTCAAGTTTGTGGAGGTTGATGAAGAGCAGTCTAGACT
rJMFF035O10+ TTTGTGGAGGTTGATGAAGAGCAGTCTAGACT
____________________________________________________________
consensus GCTTTTGGGTAAGGAGCTTCCTCTCAAGTTTGTGGAGGTTGATGAAGAGCAGTCTAGACT
. : . : . : . : . : . :
rJMSF016F20+ TGTCCTCAGTAACCGCAAGGCCATGGCTGATAGTCAGGCACAGTTGGGAATTGGATCAGT
rJMSF019O13+ TGTCCTCAGTAACCGCAAGGCCATGGCTGATAGTCAGGCACAGTTGGGAATTGGATCAGT
rJMSF047F10+ TGTCCTCAGTAACCGCAAGGCCATGGCTGATAGTCAGGCACAGTTGGGAATTGGATCAGT
rJMSF024G07+ TGTCCTCAGTAACCGCAAGGCCATGGCTGATAGTCAGGCACAGTTGGGAATTGGATCAGT
rJMSF051A05+ TGTCCTCAGTAACCGCAAGGCCATGGCTGATAGTCAGGCACAGTTGGGAATTGGATCAGT
rJMSF048K13+ TGTCCTCAGTAACCGCAAGGCCATGGCTGATAGTCAGGCACAGTTGGGAATTGGATCAGT
rJMSF044C08+ TGTCCTCAGTAACCGCAAGGCCATGGCTGATAGTCAGGCACAGTTGGGAATTGGATCAGT
rJMSF025L10+ TGTCCTCAGTAACCGCAAGGCCATGGCTGATAGTCAGGCACAGTTGGGAATTGGATCAGT
rJMFF004J16+ TGTCCTCAGTAACCGCAAGGCCATGGCTGATAGTCAGGCACAGTTGGGAATTGGATCAGT
rJMFF035O10+ TGTCCTCAGTAACCGCAAGGCCATGGCTGATAGTCAGGCACAGTTGGGAATTGGATCAGT
____________________________________________________________
consensus TGTCCTCAGTAACCGCAAGGCCATGGCTGATAGTCAGGCACAGTTGGGAATTGGATCAGT
. : . : . : . : . : . :
rJMSF016F20+ TGTACTGGGAACTGTTCAGAGTTTGAAGCCATATGGTGCTTTCATTGATATAGGAGGGAT
rJMSF019O13+ TGTACTGGGAACTGTTCAGAGTTTGAAGCCATATGGTGCTTTCATTGATATAGGAGGGAT
rJMSF047F10+ TGTACTGGGAACTGTTCAGAGTTTGAAGCCATATGGTGCTTTCATTGATATAGGAGGGAT
rJMSF024G07+ TGTACTGGGAACTGTTCAGAGTTTGAAGCCATATGGTGCTTTCATTGATATAGGAGGGAT
rJMSF051A05+ TGTACTGGGAACTGTTCAGAGTTTGAAGCCATATGGTGCTTTCATTGATATAGGAGGGAT
rJMSF048K13+ TGTACTGGGAACTGTTCAGAGTTTGAAGCCATATGGTGCTTTCATTGATATAGGAGGGAT
rJMSF044C08+ TGTACTGGGAACTGTTCAGAGTTTGAAGCCATATGGTGCTTTCATTGATATAGGAGGGAT
rJMSF025L10+ TGTACTGGGAACTGTTCAGAGTTTGAAGCCATATGGTGCTTTCATTGATATAGGAGGGAT
rJMFF004J16+ TGTACTGGGAACTGTTCAGAGTTTGAAGCCATATGGTGCTTTCATTGATATAGGAGGGAT
rJMFF035O10+ TGTACTGGGAACTGTTCAGAGTTTGAAGCCATATGGTGCTTTCATTGATATAGGAGGGAT
____________________________________________________________
consensus TGTACTGGGAACTGTTCAGAGTTTGAAGCCATATGGTGCTTTCATTGATATAGGAGGGAT
. : . : . : . : . : . :
rJMSF016F20+ TAATGGTCTCCTCCATGTTAGCCAGATCAGTCATGATCGGGTCTCAGATATTGAAACGGT
rJMSF019O13+ TAATGGTCTCCTCCATGTTAGCCAGATCAGTCATGATCGGGTCTCAGATATTGAAACGGT
rJMSF047F10+ TAATGGTCTCCTCCATGTTAGCCAGATCAGTCATGATCGGGTCTCAGATATTGAAACGGT
rJMSF024G07+ TAATGGTCTCCTCCATGTTAGCCAGATCAGTCATGATCGGGTCTCAGATATTGAAACGGT
rJMSF051A05+ TAATGGTCTCCTCCATGTTAGCCAGATCAGTCATGATCGGGTCTCAGATATTGAAACGGT
rJMSF048K13+ TAATGGTCTCCTCCATGTTAGCCAGATCAGTCATGATCGGGTCTCAGATATTGAAACGGT
rJMSF044C08+ TAATGGTCTCCTCCATGTTAGCCAGATCAGTCATGATCGGGTCTCAGATATTGAAACGGT
rJMSF025L10+ TAATGGTCTCCTCCATGTTAGCCAGATCAGTCATGATCGGGTCTCAGATATTGAAACGGT
rJMFF004J16+ TAATGGTCTCCTCCATGTTAGCCAGATCAGTCATGATCGGGTCTCAGATATTGAAACGGT
rJMFF035O10+ TAATGGTCTCCTCCATGTTAGCCAGATCAGTCATGATCGGGTCTCAGATATTGAAACGGT
____________________________________________________________
consensus TAATGGTCTCCTCCATGTTAGCCAGATCAGTCATGATCGGGTCTCAGATATTGAAACGGT
. : . : . : . : . : . :
rJMSF016F20+ CCTTCAGCCGGGTGACACCTTAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
rJMSF019O13+ CCTTCAGCCGGGTGACACCTTAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
rJMSF047F10+ CCTTCAGCCGGGTGACACCTTAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
rJMSF024G07+ CCTTCAGCCGGGTGACACCTTAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
rJMSF051A05+ CCTTCAGCCGGGTGACACCTTAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
rJMSF048K13+ CCTTCAGCCGGGTGACACCTTAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
rJMSF044C08+ CCTTCAGCCGGGTGACACCTTAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
rJMSF025L10+ CCTTCAGCCGGGTGACACCTTAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
rJMFF004J16+ CCTTCAGCCGGGTGACACCTTAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
rJMFF035O10+ CCTTCAGCCGGGTGACACCTTAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
rJMFF046K06+ TAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
____________________________________________________________
consensus CCTTCAGCCGGGTGACACCTTAAAGGTCATGATCTTGAGCCATGACCGTGAGAGGGGCCG
. : . : . : . : . : . :
rJMSF016F20+ TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
rJMSF019O13+ TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
rJMSF047F10+ TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
rJMSF024G07+ TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
rJMSF051A05+ TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
rJMSF048K13+ TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
rJMSF044C08+ TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
rJMSF025L10+ TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
rJMFF004J16+ TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
rJMFF035O10+ TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
rJMFF046K06+ TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
____________________________________________________________
consensus TGTGAGTCTTTCTACAAAGAAGCTGGAACCTACACCTGGTGACATGATTCGCAATCCTAC
. : . : . : . : . : . :
rJMSF016F20+ ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
rJMSF019O13+ ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
rJMSF047F10+ ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
rJMSF024G07+ ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
rJMSF051A05+ ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
rJMSF048K13+ ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
rJMSF044C08+ ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
rJMSF025L10+ ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
rJMFF004J16+ ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
rJMFF035O10+ ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
rJMFF046K06+ ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
____________________________________________________________
consensus ACTTGTGTTTGAGAAAGCTGAGGAGATGGCACAAACATTCAGGCAAAGAATTGCTCAAGC
. : . : . : . : . : . :
rJMSF016F20+ TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
rJMSF019O13+ TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
rJMSF047F10+ TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
rJMSF024G07+ TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
rJMSF051A05+ TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
rJMSF048K13+ TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
rJMSF044C08+ TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
rJMSF025L10+ TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
rJMFF004J16+ TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
rJMFF035O10+ TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
rJMFF046K06+ TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
____________________________________________________________
consensus TGAAGCAATGGCTCGTGCAGATATGCTGAGATTCCAACCCGAGAGTGGATTGACTCTGAG
. : . : . : . : . : . :
rJMSF016F20+ CTCTGATGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGGGATTGGATTTGAG
rJMSF019O13+ CTCTGATGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGGGATTGGATTTGAG
rJMSF047F10+ CTCTGATGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGGGATTGGATTTGAG
rJMSF024G07+ CTCTGATGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGGGATTGGATTTGAG
rJMSF051A05+ CTCTGATGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGGGATTGGATTTGAG
rJMSF048K13+ CTCTGATGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGGGATTGGATTTGAG
rJMSF044C08+ CTCTGATGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGGGATTGGATTTGAG
rJMSF025L10+ CTCTGATGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGGGATTGGATTTGAG
rJMFF004J16+ CTCTGATGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGTGATTGGATTTGAG
rJMFF035O10+ CTCTGTTGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGGGATTGGATTTGAG
rJMFF046K06+ CTCTGTTGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGGGATTGGATTTGAG
____________________________________________________________
consensus CTCTGATGGGATTTTAGGCCCACTGAGCTCTGACTTGCCGGCAGAGGGATTGGATTTGAG
. : . : . : . : . : . :
rJMSF016F20+ CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
rJMSF019O13+ CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
rJMSF047F10+ CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
rJMSF024G07+ CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
rJMSF051A05+ CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
rJMSF048K13+ CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
rJMSF044C08+ CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
rJMSF025L10+ CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
rJMFF004J16+ CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
rJMFF035O10+ CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
rJMFF046K06+ CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
____________________________________________________________
consensus CGAAATTCCGCAGGCGGAAGATTCATTTGATATAAGCGAAATTCCTCCCGCCGAAGATTC
. : . : . : . : . : . :
rJMSF016F20+ AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
rJMSF019O13+ AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
rJMSF047F10+ AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
rJMSF024G07+ AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
rJMSF051A05+ AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
rJMSF048K13+ AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
rJMSF044C08+ AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
rJMSF025L10+ AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
rJMFF004J16+ AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
rJMFF035O10+ AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
rJMFF046K06+ AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
____________________________________________________________
consensus AATCGATTCAATCGACGATTTATAAATTGTTTTTGCAGAAATCTTGTGGCAGGTAACCTA
. : . : . : . : . : . :
rJMSF016F20+ TGTAAAACTT
rJMSF019O13+ TGTAAAACTTTGGATAACCCTGCGTGATATAGTGAAAATATTGTTCAAATT
rJMSF047F10+ TGTAAAACTTTGGATAACCCTGCGTGATATAGTGAAAATAT
rJMSF024G07+ TGTAAAACTTTGGATAACCCTGCGTGATATAGTGAAAATAT
rJMSF051A05+ TGTAAAACTTTGGATAACCCTGCGTGATATAGTGAAAATATTGTTCAAATT
rJMSF048K13+ TGTAAAACTTTGGATAACCCTGCGTGATATAGTGAAAATATTGTTCAAATT
rJMSF044C08+ TGTAAAACTTTGGATAACCCTGCGTGATATAGTGAAAATATTGTTCAAATTTGTATAAT
rJMSF025L10+ TGTAAAACTTTGGATAACCCTGCGTGATATAGTGAAAAT
rJMFF004J16+ TGTAAAACTTTGGATAACCCTGCGTGATATAGTGAAAATATTGTTCAAATTTGTATAAT
rJMFF035O10+ TGTAAAACTTTGGATAACCCTGCGTGATATAGTGAAAATATTGTTCAAATTTGTATAAT
rJMFF046K06+ TGTAAAACTTTGGATAACCCTGCGTGATATAGTGAAAATATTGTTCAAATTTGTATAATT
____________________________________________________________
consensus TGTAAAACTTTGGATAACCCTGCGTGATATAGTGAAAATATTGTTCAAATTTGTATAATT
. : . : . : . : . : . :
rJMFF046K06+ ATCTATCTTAATCTGGATCTTTCATTCTTTCCAAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus ATCTATCTTAATCTGGATCTTTCATTCTTTCCAAAAAAAAAAAAAAAAACTCTCCAGGGT