Contig 011186:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038A19Sequence456003279 (2)emb|CAA70968.2|2e-72amino acid transporter [Solanum tuberosum]692011186 (3)ref|XP_011078457.1|5e-92PREDICTED: amino acid permease 6-like [Sesamum indicum]
JMFF046E17Sequence633003279 (2)emb|CAA70968.2|5e-64amino acid transporter [Solanum tuberosum]551011186 (3)ref|XP_011074307.1|4e-43PREDICTED: amino acid permease 6 [Sesamum indicum]
JMFN017O01Sequence456011186 (3)ref|XP_011074307.1|8e-55PREDICTED: amino acid permease 6 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF038A19+ GAGCCGTTTTGG
                      ____________________________________________________________
consensus GAGCCGTTTTGG
 
. : . : . : . : . : . :
rJMFF038A19+ TTGATCGACTTCGCTAATGTTTGCATTGCCATTCATCTCGTCGGAGCTTACCAGGTTTTC
                      ____________________________________________________________
consensus TTGATCGACTTCGCTAATGTTTGCATTGCCATTCATCTCGTCGGAGCTTACCAGGTTTTC
 
. : . : . : . : . : . :
rJMFF038A19+ TGTCAGCCAATCTTCGGGTTCGTGGAGTCACGCAGCAGCGAAAAATGGCCGGAGAGCAAA
                      ____________________________________________________________
consensus TGTCAGCCAATCTTCGGGTTCGTGGAGTCACGCAGCAGCGAAAAATGGCCGGAGAGCAAA
 
. : . : . : . : . : . :
JMFN017O01- AAGGGTCAACTTT
rJMFF038A19+ TTCATAACGGCAGAATACGCGATCAGAATTCCATGCTTGGGAGCTTTAAGGGTCAACTTT
rJMFF046E17+ AAGGGTCAACTTT
                      ____________________________________________________________
consensus TTCATAACGGCAGAATACGCGATCAGAATTCCATGCTTGGGAGCTTTAAGGGTCAACTTT
 
. : . : . : . : . : . :
JMFN017O01- TTCCGGCTGACATGGAGGACAACGTACGTGATAGTCACATCGGTGTTGGCCATGATCTTT
rJMFF038A19+ TTCCGGCTGACATGGAGGACAACGTACGTGATAGTCACATCGGTGTTGGCCATGATCTTT
rJMFF046E17+ TTCCGGCTGACATGGAGGACAACGTACGTGATAGTCACATCG--GTTGGCCATGATCTTT
                      ____________________________________________________________
consensus TTCCGGCTGACATGGAGGACAACGTACGTGATAGTCACATCGGTGTTGGCCATGATCTTT
 
. : . : . : . : . : . :
JMFN017O01- CCGTTCTTCAATGACTTCCTGGGGTTGATCGGCGCCGCCTCGTTTTACCCGTTGACGGTG
rJMFF038A19+ CCGTTCTTCAATGACTTCCTGGGGTTGATCGGCGCCGCCTCGTTTTACCCGTTGACGGTG
rJMFF046E17+ CCGTTCTTCAATGACTTCCTGGGGTTGATCGGCGCCGCCTCGTTTTACCCGTTGACGGTG
                      ____________________________________________________________
consensus CCGTTCTTCAATGACTTCCTGGGGTTGATCGGCGCCGCCTCGTTTTACCCGTTGACGGTG
 
. : . : . : . : . : . :
JMFN017O01- TACTTCCCCATCGAAATGCACATCGCTCAAGCCAAAATCCCCAAGTATTCATTCAGGTGG
rJMFF038A19+ TACTTCCCCATCGAAATGCACATCGCTCAAGCCAAAATCCCCAAGTATTCATTCAGGTGG
rJMFF046E17+ TACTTCCCCATCGAAATGCACATCGCTCAAGCCAAAATCCCCAAGTATTCATTCAGGTGG
                      ____________________________________________________________
consensus TACTTCCCCATCGAAATGCACATCGCTCAAGCCAAAATCCCCAAGTATTCATTCAGGTGG
 
. : . : . : . : . : . :
JMFN017O01- ACATGGCTGAAAATTCTGAGCTGGGCTTGCCTGTTCGTCTCCCTTGTGGCCGCCGCTGGA
rJMFF038A19+ ACATGGCTGAAAATTCTGAGCTGGGCTTGCCTGTTCGTCTCCCTTGTGGCCGCCGCTGGA
rJMFF046E17+ ACATGGCTGAAAATTCTGAGCTGGGCTTGCCTGTTCGTCTCCCTTGTGGCCGCCGCTGGA
                      ____________________________________________________________
consensus ACATGGCTGAAAATTCTGAGCTGGGCTTGCCTGTTCGTCTCCCTTGTGGCCGCCGCTGGA
 
. : . : . : . : . : . :
JMFN017O01- TCCATTCAGGGCCTCGCTTCCGACGTCAAAACATATAAACCTTTTAAAACTCAATGATAT
rJMFF038A19+ TCCATTCAGGGCCTCGCTTCCGACGTCAAAACATATAAACCTTTTAAAACTCAATGATAT
rJMFF046E17+ TCCATTCAGGGCCTCGCTTCCGACGTCAAAACATATAAACCTTTTAAAACTCAATGATAT
                      ____________________________________________________________
consensus TCCATTCAGGGCCTCGCTTCCGACGTCAAAACATATAAACCTTTTAAAACTCAATGATAT
 
. : . : . : . : . : . :
JMFN017O01- CTCCATCCAGTTATTAGCAGTGTAGAATATGTAATAATAGTTTCAATAAAATGGATGGGA
rJMFF038A19+ CTCCATCCAGTTATTAGCAGTGTAGAATATGTAATAATAGTTTCAATAAAATGGATGGGA
rJMFF046E17+ CTCCATCCAGTTATTAGCAGTGTAGAATATGTAATAATAGTTTCAATAAAATGGATGGGA
                      ____________________________________________________________
consensus CTCCATCCAGTTATTAGCAGTGTAGAATATGTAATAATAGTTTCAATAAAATGGATGGGA
 
. : . : . : . : . : . :
JMFN017O01- TTCTGATGGTTAATGCAAGTGTAGGATGTGTGTTTAGCAATTTTCATATTAAATTCAATG
rJMFF038A19+ TTCTGATGGTTAATGCAAGTGTAGGATGTGTGTTTAGCAATTTTCATATTAAATTCAATG
rJMFF046E17+ TTCTGATGGTTAATGCAAGTGTAGGATGTGTGTTTAGCAATTTTCATATTAAATTCAATG
                      ____________________________________________________________
consensus TTCTGATGGTTAATGCAAGTGTAGGATGTGTGTTTAGCAATTTTCATATTAAATTCAATG
 
. : . : . : . : . : . :
JMFN017O01- CCAAAGATAGAGTTATGT
rJMFF038A19+ CCAAAGATAGAGTTATGTAGTTGTTATTTGTTAAATATAACAATAAGGTCAGAGATTAGA
rJMFF046E17+ CCAAAGATAGAGTTATGTAGTTGTTATTTGTTAAATATAACAATAAGGTCAGAGATTAGA
                      ____________________________________________________________
consensus CCAAAGATAGAGTTATGTAGTTGTTATTTGTTAAATATAACAATAAGGTCAGAGATTAGA
 
. : . : . : . : . : . :
rJMFF038A19+ CTTTTGTATGTTTACTATAT
rJMFF046E17+ CTTTTGTATGTTTACTATATACATATAAAAGGTCATAAAATTAAGTAAAGTCATTAGTGC
                      ____________________________________________________________
consensus CTTTTGTATGTTTACTATATACATATAAAAGGTCATAAAATTAAGTAAAGTCATTAGTGC