Contig 011181:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045L24-                                                         GGTGTGTCTCCCCG
rJMFF045L24+                                                         GTGTGTCTCCCCG
                      ____________________________________________________________
consensus                                                           GGTGTGTCTCCCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045L24-           TAGTCCCGTCCGACATGGCATTCAACTCCTTCTGAAATCCGGATTTCAAGTCCGCACTAT
rJMFF045L24+          TAGTCCCGTCCGACATGGCATTCAACTCCTTCTGAAATCCGGATTTCAAGTCCGCACTAT
                      ____________________________________________________________
consensus             TAGTCCCGTCCGACATGGCATTCAACTCCTTCTGAAATCCGGATTTCAAGTCCGCACTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045L24-           AAATTACAGTCCCTCAAGAACCACCCATCTCACCGACGGCACCCCGACACTGAAGTTTGG
rJMFF045L24+          AAATTACAGTCCCTCAAGAACCACCCATCTCACCGACGGCACCCCGACACTGAAGTTTGG
                      ____________________________________________________________
consensus             AAATTACAGTCCCTCAAGAACCACCCATCTCACCGACGGCACCCCGACACTGAAGTTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045L24-           AGTGTCAAAATTAAAAACGTTAGAAAAGGGAACTCTTTTGAGGAAAGAAAACAAGACTAG
rJMFF045L24+          AGTGTCAAAATTAAAAACGTTAGAAAAGGGAACTCTTTTGAGGAAAGAAAACAAGACTAG
                      ____________________________________________________________
consensus             AGTGTCAAAATTAAAAACGTTAGAAAAGGGAACTCTTTTGAGGAAAGAAAACAAGACTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045L24-           TGATTCAGTGTATGTCTTGCAGAGCTCTGTAATCTCCGAATTTAGCTCTTAAAATCGCTG
rJMFF045L24+          TGATTCAGTGTATGTCTTGCAGAGCTCTGTAATCTCCGAATTTAGCTCTTAAAATCGCTG
                      ____________________________________________________________
consensus             TGATTCAGTGTATGTCTTGCAGAGCTCTGTAATCTCCGAATTTAGCTCTTAAAATCGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045L24-           CAG                                                         
rJMFF045L24+          CAGCTAATTTTGTTACTGATGAAAGGATTTTTCTTTGGTGCATTGCTTCAACTGCCATAA
                      ____________________________________________________________
consensus             CAGCTAATTTTGTTACTGATGAAAGGATTTTTCTTTGGTGCATTGCTTCAACTGCCATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF045L24+          GTTATGGGAGAGGAAGATACTGTGTCTGAGTTGCCAGATGCCGCTGCAAATGGGAATGCA
                      ____________________________________________________________
consensus             GTTATGGGAGAGGAAGATACTGTGTCTGAGTTGCCAGATGCCGCTGCAAATGGGAATGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF045L24+          CCCCTTGAGGGAAACAATGAGGCTGCTGAGGAGAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             CCCCTTGAGGGAAACAATGAGGCTGCTGAGGAGAAAAAAAAAAAAAAAACTCTCCAGGGT