Contig 011176:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004A03Sequence583004454 (5)ref|XP_006353238.1|6e-32PREDICTED: protease Do-like 10, mitochondrial-like [Solanum tuberosum]767011176 (7)ref|XP_009803816.1|4e-117PREDICTED: protease Do-like 10, mitochondrial [Nicotiana sylvestris]
JMFF010E08Sequence634004454 (5)ref|XP_006353238.1|9e-43PREDICTED: protease Do-like 10, mitochondrial-like [Solanum tuberosum]719011176 (7)ref|XP_009803816.1|7e-117PREDICTED: protease Do-like 10, mitochondrial [Nicotiana sylvestris]
JMFF022C23Sequence533004454 (5)ref|XP_006353238.1|6e-20PREDICTED: protease Do-like 10, mitochondrial-like [Solanum tuberosum]742011176 (7)ref|XP_009803816.1|6e-124PREDICTED: protease Do-like 10, mitochondrial [Nicotiana sylvestris]
JMFF044N22Sequence646004454 (5)ref|XP_006353238.1|6e-46PREDICTED: protease Do-like 10, mitochondrial-like [Solanum tuberosum]654011176 (7)ref|XP_009803816.1|1e-88PREDICTED: protease Do-like 10, mitochondrial [Nicotiana sylvestris]
JMSF032I08Sequence676004454 (5)ref|XP_006353238.1|1e-50PREDICTED: protease Do-like 10, mitochondrial-like [Solanum tuberosum]811011176 (7)ref|XP_009803816.1|1e-137PREDICTED: protease Do-like 10, mitochondrial [Nicotiana sylvestris]
JMSF049O16Sequence493011176 (7)ref|XP_009611385.1|4e-61PREDICTED: protease Do-like 10, mitochondrial [Nicotiana tomentosiformis]444011176 (7)gb|EYU39504.1|6e-62hypothetical protein MIMGU_mgv1a003194mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF032I08+ ACTTCAAATGGTCC
                      ____________________________________________________________
consensus ACTTCAAATGGTCC
 
. : . : . : . : . : . :
rJMSF032I08+ AGAGTTGACTGGGTGCTGTGAGCAAAATCCACCCACTTTCTGATGCTTATAAGGTGTTGA
                      ____________________________________________________________
consensus AGAGTTGACTGGGTGCTGTGAGCAAAATCCACCCACTTTCTGATGCTTATAAGGTGTTGA
 
. : . : . : . : . : . :
rJMSF032I08+ GAAAAGATGATATCATTCTCTCATTTGATGGCATACCTATAGCCAATGACGGAACAGTTC
rJMFF010E08+ ACGGAACAGTTC
rJMFF022C23+ TATAGCCAATGACGGAACAGTTC
rJMFF004A03+ AAAGATGATATCATTCTCTCATTTGATGNCATAGNTATAGCCAATGACGGANCAGTTC
                      ____________________________________________________________
consensus GAAAAGATGATATCATTCTCTCATTTGATGGCATAGCTATAGCCAATGACGGAACAGTTC
 
. : . : . : . : . : . :
rJMSF032I08+ ATTTTCGAAACAGAGAGCGAATAACATTTGATCACTTGGTTTCTATGAAGAAACCTAATG
rJMFF010E08+ ATTTTCGAAACAGAGAGCGAATAACATTTGATCACTTGGTTTNTATGAAGAAACCTAATG
rJMFF022C23+ ATTTTCGAAACAGAGAGCGAATAACATTTGATCACTTGGTTTCTATGAAGAAACCTAATG
rJMFF004A03+ ATTTTCGAACCAGAGAGCGAATAACATTTGATCACTTGGTTTCTATGAAGAAACCTAATG
                      ____________________________________________________________
consensus ATTTTCGAAACAGAGAGCGAATAACATTTGATCACTTGGTTTCTATGAAGAAACCTAATG
 
. : . : . : . : . : . :
rJMSF032I08+ AAACTGCAGTACTCAAAGTACTGAGAAATGGTGAGAAGCATGAGTTTAGCATCAAACTTT
rJMFF010E08+ AAACTGCAGTACTCAAAGTACTGAGAAATGGTGAGAAGCATGAGTTTAGCATCAAACTTT
rJMFF022C23+ AAACTGCAGTACTCAAAGTACTGAGAAATGGTGAGAAGCATGAGTTTAGCATCAAACTTT
rJMFF004A03+ AAACTGCAGTACTCAAAGTACTGAGAAATGGTGAGAAGCANGAGTTTAGCATCAAACTTT
                      ____________________________________________________________
consensus AAACTGCAGTACTCAAAGTACTGAGAAATGGTGAGAAGCATGAGTTTAGCATCAAACTTT
 
. : . : . : . : . : . :
rJMSF032I08+ TTCCACTGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
rJMFF010E08+ TTCCACTGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
rJMFF022C23+ TTCCACTGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
rJMFF004A03+ TTCCACTGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
rJMFF044N22+ TGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
                      ____________________________________________________________
consensus TTCCACTGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
 
. : . : . : . : . : . :
rJMSF049O16+ AGACT
rJMSF032I08+ TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
rJMFF010E08+ TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
rJMFF022C23+ TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
rJMFF004A03+ TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
JMSF049O16- AGACT
rJMFF044N22+ TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
                      ____________________________________________________________
consensus TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
 
. : . : . : . : . : . :
rJMSF049O16+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTTAGGAAACTTCCAACAAAAC
rJMSF032I08+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
rJMFF010E08+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
rJMFF022C23+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
rJMFF004A03+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
JMSF049O16- GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTTAGGAAACTTCCAACAAAAC
rJMFF044N22+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
                      ____________________________________________________________
consensus GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
 
. : . : . : . : . : . :
rJMSF049O16+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
rJMSF032I08+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
rJMFF010E08+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
rJMFF022C23+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
rJMFF004A03+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
JMSF049O16- CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
rJMFF044N22+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
                      ____________________________________________________________
consensus CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
 
. : . : . : . : . : . :
rJMSF049O16+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
rJMSF032I08+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
rJMFF010E08+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
rJMFF022C23+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
rJMFF004A03+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
JMSF049O16- AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
rJMFF044N22+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
                      ____________________________________________________________
consensus AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
 
. : . : . : . : . : . :
rJMSF049O16+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
rJMSF032I08+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
rJMFF010E08+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
rJMFF022C23+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
rJMFF004A03+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
JMSF049O16- ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
rJMFF044N22+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
                      ____________________________________________________________
consensus ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
 
. : . : . : . : . : . :
rJMSF049O16+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
rJMSF032I08+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
rJMFF010E08+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
rJMFF022C23+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
rJMFF004A03+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
JMSF049O16- AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
rJMFF044N22+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
                      ____________________________________________________________
consensus AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
 
. : . : . : . : . : . :
rJMSF049O16+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
rJMSF032I08+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
rJMFF010E08+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
rJMFF022C23+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
rJMFF004A03+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
JMSF049O16- GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
rJMFF044N22+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
                      ____________________________________________________________
consensus GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
 
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rJMSF049O16+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
rJMSF032I08+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
rJMFF010E08+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
rJMFF022C23+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
rJMFF004A03+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
JMSF049O16- TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
rJMFF044N22+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
                      ____________________________________________________________
consensus TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
 
. : . : . : . : . : . :
rJMSF049O16+ TGTATTTAAAAA
rJMSF032I08+ TGTATTTAAAAA
rJMFF010E08+ TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAA
rJMFF022C23+ TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAAT
rJMFF004A03+ TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAAT
JMSF049O16- TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAATCTCTATGCA
rJMFF044N22+ TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAATCTCTATGCATTG
                      ____________________________________________________________
consensus TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAATCTCTATGCATTG
 
. : . : . : . : . : . :
rJMFF044N22+ GCTGAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus GCTGAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG