| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014P21 | Sequence | 572 | 000237 (8) | emb|CDP10449.1| | 5e-51 | unnamed protein product [Coffea canephora] | 693 | 011157 (3) | ref|XP_009613354.1| | 5e-59 | PREDICTED: probable galactinol--sucrose galactosyltransferase 6 [Nicotiana tome |
| JMFF042L11 | Sequence | 645 | 000237 (8) | emb|CDP10449.1| | 3e-51 | unnamed protein product [Coffea canephora] | 552 | 011157 (3) | ref|XP_004242758.2| | 5e-40 | PREDICTED: probable galactinol--sucrose galactosyltransferase 6 isoform X1 [Sol |
| JMSF001G09 | Sequence | 429 | 000237 (8) | ref|XP_006358304.1| | 2e-08 | PREDICTED: probable galactinol--sucrose galactosyltransferase 6-like [Solanum t | 729 | 011157 (3) | ref|XP_010323287.1| | 2e-96 | PREDICTED: probable galactinol--sucrose galactosyltransferase 6 isoform X2 [Sol |
This contig is upended
. : . : . : . : . : . :
rJMSF001G09+ GGTGCTTGGAGTATACAACTGCCAAGGCGCAGCGTGGAACGCAGTTGAGAGGAAGAA
____________________________________________________________
consensus GGTGCTTGGAGTATACAACTGCCAAGGCGCAGCGTGGAACGCAGTTGAGAGGAAGAA
. : . : . : . : . : . :
rJMSF001G09+ CACGTTCCACCGAACTGGAACCGAGGCATTAACGGGATATGTTAGGGGCGGTGATGTTCA
rJMFF014P21+ AACGGGATATGTTAGGGGCGGTGATGTTCA
____________________________________________________________
consensus CACGTTCCACCGAACTGGAACCGAGGCATTAACGGGATATGTTAGGGGCGGTGATGTTCA
. : . : . : . : . : . :
rJMSF001G09+ TAGCCTCTCTGAAGTTGCGTTGGACTCGAACTGGAGCGGAGACTCTGCTGTATACTCTCA
rJMFF014P21+ TAGCCTCTCTGAAGTTGCGTTGGACTCGAACTGGAGCGGAGACTCTGCTGTATACTCTCA
____________________________________________________________
consensus TAGCCTCTCTGAAGTTGCGTTGGACTCGAACTGGAGCGGAGACTCTGCTGTATACTCTCA
. : . : . : . : . : . :
rJMSF001G09+ CAACCAACGCAAACTCACCGCCCTTCCGTAC-AATGCTGCAATGCCCATTTCCTTGAAAA
rJMFF014P21+ CAACCAACGCAAACTCACCGCCCTTCCGTACAAATGCTGCAATGCCCATTTCCTTGAAAA
____________________________________________________________
consensus CAACCAACGCAAACTCACCGCCCTTCCGTACAAATGCTGCAATGCCCATTTCCTTGAAAA
. : . : . : . : . : . :
rJMSF001G09+ TCCTCGAGCACGACATTTTCACCATCACACCTATCAAGGTCTTGGCACCGGGCTTCAGCT
rJMFF014P21+ TCCTCGAGCACGACATTTTCACCATCACACCTATCAAGGTCTTGGCACCGGGCTTCAGCT
rJMFF042L11+ CGGGCTTCAGCT
____________________________________________________________
consensus TCCTCGAGCACGACATTTTCACCATCACACCTATCAAGGTCTTGGCACCGGGCTTCAGCT
. : . : . : . : . : . :
rJMSF001G09+ TTGCACCGTTGGGGCTCGTTGACATGTTCAATGCAGGTGGAGCAATTGAGGGACTCAAGT
rJMFF014P21+ TTGCACCGTTGGGGCTCGTTGACATGTTCAATGCAGGTGGAGCAATTGAGGGACTCAAGT
rJMFF042L11+ TTGCACCGTGGGGGCTCGTTGACATGTTCAATGCAGGTGGAGCAATTGAGGGACTCAAGT
____________________________________________________________
consensus TTGCACCGTTGGGGCTCGTTGACATGTTCAATGCAGGTGGAGCAATTGAGGGACTCAAGT
. : . : . : . : . : . :
rJMSF001G09+ ATGAAACGAAGGCCGGTTTCCAAGGCGAAGATAAAATCAAGAACTCGAGCACAGAACCTG
rJMFF014P21+ ATGAAACGAAGGCCGGTTTCCAAGGCGAAGATAAAATCAAGAACTCGAGCACAGAACCTG
rJMFF042L11+ ATGAAACGAAGGCCGGTTTCCAAGGCGAAGATAAAATCAAGAACTCGAGCACAGAACCTG
____________________________________________________________
consensus ATGAAACGAAGGCCGGTTTCCAAGGCGAAGATAAAATCAAGAACTCGAGCACAGAACCTG
. : . : . : . : . : . :
rJMSF001G09+ TGGGTGTAGTTTCTATTGAGGTTAGGGGTTGTGGCAGATTTGGTGCTTACTCATCTGCGA
rJMFF014P21+ TGGGTGTAGTTTCTATTGAGGTTAGGGGTTGTGGCAGTTTTGGTGCTTACTCATCTGCGA
rJMFF042L11+ TGGGTGTAGTTTCTATTGAGGTTAGGGGTTGTGGCAGTTTTGGTGCTTACTCATCTGCGA
____________________________________________________________
consensus TGGGTGTAGTTTCTATTGAGGTTAGGGGTTGTGGCAGTTTTGGTGCTTACTCATCTGCGA
. : . : . : . : . : . :
rJMSF001G09+ AACCAAGAAAGTGCAGATTGGGAGGAAATGTGGTCGATTTTACGTACGATTTGGATTCGG
rJMFF014P21+ AACCAAGAAAGTGCAGATTGGGAGGAAATGTGGTCGATTTTACGTACGATTTGGATTCGG
rJMFF042L11+ AACCAAGAAAGTGCAGATTGGGAGGAAATGTGGTCGATTTTACGTACGATTTGGATTCGG
____________________________________________________________
consensus AACCAAGAAAGTGCAGATTGGGAGGAAATGTGGTCGATTTTACGTACGATTTGGATTCGG
. : . : . : . : . : . :
rJMSF001G09+ GTTTGGTGACCTTAAACTTGGATGACATGCCTGCAAAAGAACAGAGAGTTCACATGATTG
rJMFF014P21+ GTTTGGTGACCTTAAACTTGGATGACATGCCTGCAAAAGAACAGAGAGTTCACATGATTG
rJMFF042L11+ GTTTGGTGACCTTAAACTTGGATGACATGCCTGCAAAAGAACAGAGAGTTCACATGATTG
____________________________________________________________
consensus GTTTGGTGACCTTAAACTTGGATGACATGCCTGCAAAAGAACAGAGAGTTCACATGATTG
. : . : . : . : . : . :
rJMSF001G09+ AGGTTGAATTATAAGATGCTAAATTCTTCTTCAGATTATTTGGGGATGAGAATTGAAGAT
rJMFF014P21+ AGGTTGAATTATAAGATGCTAAATTCTTCTTCAGATTATTTGGGGATGAGAATTGAAGAT
rJMFF042L11+ AGGTTGAATTATAAGATGCTAAATTCTTCTTCAGATTATTTGGGGATGAGAATTGAAGAT
____________________________________________________________
consensus AGGTTGAATTATAAGATGCTAAATTCTTCTTCAGATTATTTGGGGATGAGAATTGAAGAT
. : . : . : . : . : . :
rJMSF001G09+ TCAAGTGACTTTCCTCTCTCCCAGGATTGTTTTCCACTATGGATGAAAACGATGAATGAG
rJMFF014P21+ TCAAGTGACTTTCCTCTCTCCCAGGATTGTTTTCCACTATGGATGAAAACGATGAATGAG
rJMFF042L11+ TCAAGTGACTTTCCTCTCTCCCAGGATTGTTTTCCACTATGGATGAAAACGATGAATGAG
____________________________________________________________
consensus TCAAGTGACTTTCCTCTCTCCCAGGATTGTTTTCCACTATGGATGAAAACGATGAATGAG
. : . : . : . : . : . :
rJMSF001G09+ AATATGAGATTGT
rJMFF014P21+ AATATGAGATTGTATTAGAACATTTATCTAATCTCAAGCTGAAAAATTACTTCAA
rJMFF042L11+ AATATGAGATTGTATTAGAACATTTATCTAATCTCAAGCTGAAAAATTACTTCAATGAAA
____________________________________________________________
consensus AATATGAGATTGTATTAGAACATTTATCTAATCTCAAGCTGAAAAATTACTTCAATGAAA
. : . : . : . : . : . :
rJMFF042L11+ TCAATCCTGCTTAAAATCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus TCAATCCTGCTTAAAATCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG