Contig 011156:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001H03Sequence651012080 (15)610011156 (15)ref|XP_011022059.1|7e-15PREDICTED: nucleolin 1-like isoform X1 [Populus euphratica]
JMFF002D21Sequence673012080 (15)826011156 (15)ref|XP_004231484.1|1e-42PREDICTED: nucleolin 1 isoform X1 [Solanum lycopersicum]
JMFF009C07Sequence686012080 (15)724011156 (15)ref|XP_010315558.1|2e-31PREDICTED: nucleolin 1 isoform X2 [Solanum lycopersicum]
JMFF017K23Sequence649012080 (15)378011156 (15)
JMFF019N23Sequence685012080 (15)771011156 (15)ref|XP_010315558.1|1e-31PREDICTED: nucleolin 1 isoform X2 [Solanum lycopersicum]
JMFF030E21Sequence681011156 (15)ref|XP_010315558.1|6e-21PREDICTED: nucleolin 1 isoform X2 [Solanum lycopersicum]
JMFF032P10Sequence685012080 (15)717011156 (15)ref|XP_004231484.1|8e-28PREDICTED: nucleolin 1 isoform X1 [Solanum lycopersicum]
JMFF042K20Sequence631012080 (15)620011156 (15)gb|ABK94939.1|3e-08unknown [Populus trichocarpa]
JMFF044J08Sequence642012080 (15)631011156 (15)ref|XP_011022059.1|3e-12PREDICTED: nucleolin 1-like isoform X1 [Populus euphratica]
JMFF047P08Sequence640012080 (15)572011156 (15)ref|XP_004231484.1|6e-13PREDICTED: nucleolin 1 isoform X1 [Solanum lycopersicum]
JMSF002B24Sequence264012080 (15)ref|XP_011070437.1|2e-04PREDICTED: nucleolin 1-like [Sesamum indicum]771011156 (15)ref|XP_004231484.1|1e-53PREDICTED: nucleolin 1 isoform X1 [Solanum lycopersicum]
JMSF015C24Sequence227018877793011156 (15)dbj|BAC02896.1|1e-20tobacco nucleolin [Nicotiana tabacum]
JMSF016G15Sequence452012080 (15)763011156 (15)ref|XP_010315558.1|2e-49PREDICTED: nucleolin 1 isoform X2 [Solanum lycopersicum]
JMSF020I02Sequence736012080 (15)738011156 (15)ref|XP_010315558.1|3e-15PREDICTED: nucleolin 1 isoform X2 [Solanum lycopersicum]
JMSF033G08Sequence739012080 (15)791011156 (15)ref|XP_004231484.1|1e-42PREDICTED: nucleolin 1 isoform X1 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF015C24+ CTGTGATGATGCTTCT
                      ____________________________________________________________
consensus CTGTGATGATGCTTCT
 
. : . : . : . : . : . :
rJMSF015C24+ GTCTNGTGCTGGACCTGGTTGGNCAGACTGTTATGTTCCAGTTCATGGTTCTTGAAGGTG
                      ____________________________________________________________
consensus GTCTNGTGCTGGACCTGGTTGGNCAGACTGTTATGTTCCAGTTCATGGTTCTTGAAGGTG
 
. : . : . : . : . : . :
rJMSF015C24+ TCTTCATGCATTAATCATGTCTTCTTTATAGCTGTTTACAGCAAGACTGTACCAATCTCA
                      ____________________________________________________________
consensus TCTTCATGCATTAATCATGTCTTCTTTATAGCTGTTTACAGCAAGACTGTACCAATCTCA
 
. : . : . : . : . : . :
rJMSF015C24+ TATAAGGCACAATCACAAGATGAAGAAGCCCCTGCTCACTTAATCAATAGACAACGATTT
                      ____________________________________________________________
consensus TATAAGGCACAATCACAAGATGAAGAAGCCCCTGCTCACTTAATCAATAGACAACGATTT
 
. : . : . : . : . : . :
rJMSF015C24+ TTAACTGTTGTCTTTTCTAGAAAAGACAACGGTTAAAAATCGTTGTCTATGTGCGTGACT
                      ____________________________________________________________
consensus TTAACTGTTGTCTTTTCTAGAAAAGACAACGGTTAAAAATCGTTGTCTATGTGCGTGACT
 
. : . : . : . : . : . :
rJMSF015C24+ TTTAACCGTTTCCTTGTTTAACAGTGACTGAGTTGGATTATTTGTTGATGTGTGTACAAA
                      ____________________________________________________________
consensus TTTAACCGTTTCCTTGTTTAACAGTGACTGAGTTGGATTATTTGTTGATGTGTGTACAAA
 
. : . : . : . : . : . :
rJMSF015C24+ TCTGTTGCAGGCTCTTCAACTTAATGGCCAACAGTTGTTGGGCCGAGAAGTGACTCTTGA
rJMSF002B24+ AGGCTCTTGAACTTAATGGTCAAGATTTGTTGGGCCGAGATGTGAAGCTTGA
rJMSF016G15+ AGGCTCTTGAACTTAATGGTCAAGATTTGTTGGGCCGAGATGTGAAGCTTGA
rJMSF033G08+ TTAATGGTCCAGATTTGNTGGGCCGAGATGTGAAGCTTGA
rJMFF002D21+ AACTTAATGGTCAAGATTTGTTGGNCCGAGATGTGAAGCTTGN
                      ____________________________________________________________
consensus TCTGTTGCAGGCTCTTGAACTTAATGGTCAAGATTTGTTGGGCCGAGATGTGAAGCTTGA
 
. : . : . : . : . : . :
rJMSF015C24+ CCTTGCTAAAGAGGGGGGAGCTTATACTCTGAATGCTGGGAAATTTGATAACTCCTTCCA
rJMSF002B24+ CCTTGCTAAAGAGAGGGGAGCTTATACTCCAAATAGTGGGGCATTTGATAACTCCTCACA
rJMSF016G15+ CCTTGCTAAAGAGAGGGGAGCTTATACTCCAAATAGTGGGGCATTTGATAACTCCTCACA
rJMSF033G08+ CCTTGCTAAAGAGAGGGGAGCTTATACTCCAAATAGTGGGGCATTTGATAACTCCTCACA
rJMFF002D21+ CNTTGCTAAAGAGAGGGGAGCTTATACTCCAAATAGTGGGGCATTTGATAACTCTTCACA
rJMSF020I02+ TCCTCACA
rJMFF019N23+ TCACA
                      ____________________________________________________________
consensus CCTTGCTAAAGAGAGGGGAGCTTATACTCCAAATAGTGGGGCATTTGATAACTCCTCACA
 
. : . : . : . : . : . :
rJMSF015C24+ GTGGCAGTTCAAGGGTGGAGGTGAAAGTACAACTGTGTTTGTTAAGGGGTTTGACAAGAA
rJMSF002B24+ GAGGCAGAGCAGGGGTGGAGGTGAAAGTACAACTGTGTTTGTTAGGGGTTTTGACAAGAA
rJMSF016G15+ GAGGCAGAGCAGGGGTGGAGGTGAAAGTACAACTGTGTTTGTTAGGGGTTTTGACAAGAA
rJMSF033G08+ GAGGCAGAGCAGGGGTGGAGGTGAAAGTACAACTGTGTTTGTTAGGGGTTTTGACAAGAA
rJMFF002D21+ GAGGCAGAGCAGGGGTGGAGGTGAAAGTACAACTGTGTTTGTTAGGGGTTTTGACAAGAA
rJMSF020I02+ GAGGCAGAGCAGGGGTGGAGGTGAAAGTACAACTGTGTTTGTTAGGGG-TTTGACAAGAA
rJMFF009C07+ GGGGTGGAGGTGAAAGTACAACTGTGTTTGTTAGGGGTTTTGACAAGAA
rJMFF019N23+ GAGGCAGAGCAGGGGTGGAGGTGAAAGTACAACTGTGTTTGTTAGGGGTTTTGACAAGAA
rJMFF032P10+ GTTAGGGGTTTTGACAAGAA
                      ____________________________________________________________
consensus GAGGCAGAGCAGGGGTGGAGGTGAAAGTACAACTGTGTTTGTTAGGGGTTTTGACAAGAA
 
. : . : . : . : . : . :
rJMSF015C24+ TGACCTTGAAGATAAGATCAGGAGTTCTCTTGAGGATCATTTTAGTTGTTGTGGAGAGAT
rJMSF002B24+ TGATACTGAAGACAATATCAGGAGTGCTCTTGAGGGTCATTTTGGTTCTTGTGGAGAGAT
rJMSF016G15+ TGATACTGAAGACAATATCAGGAGTGCTCTTGAGGGTCATTTTGGTTCTTGTGGAGAGAT
rJMSF033G08+ TGATACTGAAGACAATATCAGGAGTGCTCTTGAGGGTCATTTTGGTTCTTGTGGAGAGAT
rJMFF002D21+ TGATACTGAAGACAATATCAGGAGTGCTCTTGAGGGTCATTTTGGTTCTTGTGGAGAGAT
rJMSF020I02+ TGATACTGAAGACAATATCAGGAGTGCTCTTGAGGGTCATTTTGGTTCTTGTG--GAGAT
rJMFF001H03+ TTGTGGAGAGAT
rJMFF009C07+ TGATACTGAAGACAATATCAGGAGTGCTCTTGAGGGTCATTTTGGTTCTTGTGGAGAGAT
rJMFF019N23+ TGATACTGAAGACAATATCAGGAGTGCTCTTGAGGGTCATTTTGGTTCTTGTGGAGAGAT
rJMFF030E21+ TATCAGGAGTGCTCTTGAGGGTCATTTTGGTTCTTGTGGAGAGAT
rJMFF047P08+ AGAGAT
rJMFF032P10+ TGATACTGAAGACAATATCAGGAGTGCTCTTGAGGGTCATTTTGGTTCTTGTGGAGAGAT
                      ____________________________________________________________
consensus TGATACTGAAGACAATATCAGGAGTGCTCTTGAGGGTCATTTTGGTTCTTGTGGAGAGAT
 
. : . : . : . : . : . :
rJMSF015C24+ TAAAGGTA
rJMSF002B24+ TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMSF016G15+ TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMSF033G08+ TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMFF002D21+ TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMSF020I02+ TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMFF001H03+ TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMFF009C07+ TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMFF019N23+ TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMFF030E21+ TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMFF044J08+ CAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMFF047P08+ TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMFF032P10+ TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
rJMFF042K20+ TAAAGGGATGGCTTATATTGA
                      ____________________________________________________________
consensus TAAAGGTACCAGAATCCCAACAGACCCGGAAGGGTACATTAAAGGGATGGCTTATATTGA
 
. : . : . : . : . : . :
rJMSF002B24+ GTTCGCGGACAATGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMSF016G15+ GTTCGCGGACAATGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMSF033G08+ GTTCGCGGACAATGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMFF002D21+ GTTCGCGGACAATGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMSF020I02+ GTTCGCGGACAATGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMFF001H03+ GTTCGCGGACAGTGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMFF009C07+ GTTCGCGGACAGTGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMFF019N23+ GTTCGCGGACAATGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMFF030E21+ GTTCGCGGACAATGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMFF044J08+ GTTCGCGGACAGTGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMFF047P08+ GTTCGCGGACAATGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMFF032P10+ GTTCGCGGACAATGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
rJMFF042K20+ GTTCGCGGACAATGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
                      ____________________________________________________________
consensus GTTCGCGGACAATGATGCAATGAGCAAGGCTCTTGAGCTCAACAACTCCCAACTTGGGCA
 
. : . : . : . : . : . :
rJMSF002B24+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGTGGAGG
rJMSF016G15+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATNGTCGTGGTGAGAGTGGAGG
rJMSF033G08+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGTGGAGG
rJMFF002D21+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGCGGAGG
rJMSF020I02+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGTGGAGG
rJMFF001H03+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGTGGAGG
rJMFF009C07+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGTGGAGG
rJMFF019N23+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGTGGAGG
rJMFF030E21+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGTGGAGG
rJMFF044J08+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGTGGAGG
rJMFF047P08+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATNATAGTCGTGGTGAGAGTGGAGG
rJMFF032P10+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGTGGAGG
rJMFF042K20+ CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGTGGAGG
                      ____________________________________________________________
consensus CAGCAGCTTGTATGTTGATGAAGCTAAGCCAAGAAATGATAGTCGTGGTGAGAGTGGAGG
 
. : . : . : . : . : . :
rJMSF002B24+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMSF016G15+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMSF033G08+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMFF002D21+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMSF020I02+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMFF001H03+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMFF009C07+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMFF019N23+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMFF030E21+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMFF044J08+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMFF047P08+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMFF032P10+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
rJMFF042K20+ CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
                      ____________________________________________________________
consensus CAGAGGTGGCAGGTTTGGTGGTGGTAGGAGCGGTGGTAGGGACAGCGGTGGCAGGTTTGG
 
. : . : . : . : . : . :
rJMSF002B24+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMSF016G15+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMSF033G08+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMFF002D21+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMSF020I02+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMFF001H03+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMFF009C07+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMFF019N23+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMFF030E21+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMFF044J08+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMFF047P08+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMFF032P10+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
rJMFF017K23+ GGTGGTGGTGGTAGCTTTGGNAGTGGCGGTGGTGG
rJMFF042K20+ AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
                      ____________________________________________________________
consensus AGGAAGGGGAGGTGGTAGACGTGGTGGTGGTGGTGGTAGGTTTGGAAGTGGTGGTGGTGG
 
. : . : . : . : . : . :
rJMSF002B24+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMSF016G15+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMSF033G08+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMFF002D21+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMSF020I02+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMFF001H03+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMFF009C07+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMFF019N23+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMFF030E21+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMFF044J08+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMFF047P08+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMFF032P10+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMFF017K23+ CAGGTTTGGAGNCAGTGGCNGAGGAGGTGCCCGAACTCCTGGCAAGCCAAGCATGACTTT
rJMFF042K20+ CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
                      ____________________________________________________________
consensus CAGGTTTGGAGGCAGTGGCAGAGGAGGTGGCCGAACTCCTGGCAAGCCAAGCATGACTTT
 
. : . : . : . : . : . :
rJMSF002B24+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMSF016G15+ TTCTTCTCGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMSF033G08+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMFF002D21+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMSF020I02+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMFF001H03+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMFF009C07+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMFF019N23+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMFF030E21+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMFF044J08+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMFF047P08+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMFF032P10+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMFF017K23+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
rJMFF042K20+ TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
                      ____________________________________________________________
consensus TTCTTCTGGTAAGAAGACAACTTTTGATGATTGAGGAGTAGGCTGTGAAGCTCGGCATCA
 
. : . : . : . : . : . :
rJMSF002B24+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMSF016G15+ GGCAGCAGCCAGAATGTTTNCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMSF033G08+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMFF002D21+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMSF020I02+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMFF001H03+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMFF009C07+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMFF019N23+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMFF030E21+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMFF044J08+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMFF047P08+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMFF032P10+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
rJMFF017K23+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTNTAGTTTATTTC
rJMFF042K20+ GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
                      ____________________________________________________________
consensus GGCAGCAGCCAGAATGTTTGCCATTTTTGTTTATTTTAAGACTGAGTTCTAGTTTATTTC
 
. : . : . : . : . : . :
rJMSF002B24+ TGAA-C
rJMSF016G15+ TGAACCATGTGACCTATGATAGTTTGTATTTTGT
rJMSF033G08+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
rJMFF002D21+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
rJMSF020I02+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
rJMFF001H03+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
rJMFF009C07+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
rJMFF019N23+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
rJMFF030E21+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
rJMFF044J08+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
rJMFF047P08+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
rJMFF032P10+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
rJMFF017K23+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
rJMFF042K20+ TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
                      ____________________________________________________________
consensus TGAA-CATGTGACCTATGATAGTTTGTATTTTGTTTATCCATGTGGGGATCTATTTTGTC
 
. : . : . : . : . : . :
rJMSF033G08+ GACAATAGTTTGTTTGTTTGTTTACCTACATT
rJMFF002D21+ GACAATAGTTTGTTTGTTTGTTTACCTACATTATTTATTTATCCTCTACCGGCACCAACT
rJMSF020I02+ GACAATAGTTTGTTTGTTTGTTTACCTACATTATTTATTTATCCTCTACCGGCACCAACT
rJMFF001H03+ GACAATAGTTTGTTTGTTTGTTTACCTACATTATTTATTTA
rJMFF009C07+ GACAATAGTTTGTTTGTTTGTTTACCTACATTATTTATTTATCCTCTACCGGCACCAACT
rJMFF019N23+ GACAATAGTTTGTTTGTTTGTTTACCTACATTATTTATTTATCCTCTACCGGCACCAACT
rJMFF030E21+ GACAATAGTTTGTTTGTTTGTTTACCTACATTATTTATTTATCCTCTACCGGCACCAACT
rJMFF044J08+ GACAATAGTTTGTTTGTTTGTTTACCTACATTATTTATTTATCCTCTACCGGCACCAACT
rJMFF047P08+ GACAATAGTTTGTTTGTTTGTTTACC
rJMFF032P10+ GACAATAGTTTGTTTGTTTGTTTACCTACATTATTTATTTATCCTCTACCGGCACCAACT
rJMFF017K23+ GACAATAGTTTGTTTGTTTGTTTACCTACATTATTTATTTATCCTCTACCGGCACCAACT
rJMFF042K20+ GACAATAGTTTGTTTGTTTGTTTACCTACATTATTTATTTATCCTCTACCGGCACCAACT
                      ____________________________________________________________
consensus GACAATAGTTTGTTTGTTTGTTTACCTACATTATTTATTTATCCTCTACCGGCACCAACT
 
. : . : . : . : . : . :
rJMFF002D21+ CA
rJMSF020I02+ CATATAAAGT
rJMFF009C07+ CA
rJMFF019N23+ CATATAAAGTTGCCAAA
rJMFF030E21+ CATATAAAGTTGCCAAATTCTGTCTTTTACATTTTAT
rJMFF044J08+ CATATAAAGTTGCCAAA
rJMFF032P10+ CATATAAAGTTGCCAAATTCTGTCTTTTACATTTTATC
rJMFF017K23+ CATATAAAGTTGCCAAATTCTGTCTTNTACATTTTATC
rJMFF042K20+ CATATAAAGTTGCCAAATTCTGTCTTTTACATTTTATCTATAAAATCCCCTCCTACAGGC
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consensus CATATAAAGTTGCCAAATTCTGTCTTTTACATTTTATCTATAAAATCCCCTCCTACAGGC