Contig 011126:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026O01Sequence563011126 (5)ref|XP_009629608.1|5e-67PREDICTED: transcription factor BTF3 homolog 4-like [Nicotiana tomentosiformis]715011126 (5)ref|XP_011078804.1|4e-77PREDICTED: transcription factor BTF3 homolog 4-like [Sesamum indicum]
JMFF038H08Sequence503011126 (5)gb|ABM55742.1|9e-63putative transcription factor Btf3 [Capsicum annuum]726011126 (5)ref|XP_011078804.1|2e-77PREDICTED: transcription factor BTF3 homolog 4-like [Sesamum indicum]
JMFN042I02Sequence638011126 (5)ref|XP_011078804.1|1e-76PREDICTED: transcription factor BTF3 homolog 4-like [Sesamum indicum]

Alignment

This contig is upended


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rJMFF026O01- TCATAT
                      ____________________________________________________________
consensus TCATAT
 
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rJMFF026O01- TCAGTACACACCCAAGGATAGGAAAGATCTCAAATCACTTAAAATGGAACAAATTTTAAT
rJMFF038H08- AAT
                      ____________________________________________________________
consensus TCAGTACACACCCAAGGATAGGAAAGATCTCAAATCACTTAAAATGGAACAAATTTTAAT
 
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rJMFF026O01- TTTATTTTTGTCCCTCATCAGCAGCAGCTTCAAAGGTTTCACCATCCACGAGTTGGGGCA
JMFN042I02+ CATCAGCAGCAGCTTCAAAGGTTTCACCATCCACGAGTTGGGGCA
rJMFF038H08- TTTATTTTTGTCCCTCATCAGCAGCAGCTTCAAAGGTTTCACCATCCACGAGTTGGGGCA
                      ____________________________________________________________
consensus TTTATTTTTGTCCCTCATCAGCAGCAGCTTCAAAGGTTTCACCATCCACGAGTTGGGGCA
 
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rJMFF026O01- CCTCATCGTCATCTTGTTGAGATGCATTTGCACCCGTAGCTGCATCTGCAGTGTCAGCAA
JMFN042I02+ CCTCATCGTCATCTTGTTGAGATGCATTTGCACCCGTAGCTGCATCTGCAGTGTCAGCAA
JMFF026O01+ TGTTGAGATGCATTTGCACCCGTAGCTGCATCTGCAGTGTCAGCAA
rJMFF038H08- CCTCATCGTCATCTTGTTGAGATGCATTTGCACCCGTAGCTGCATCTGCAGTGTCAGCAA
                      ____________________________________________________________
consensus CCTCATCGTCATCTTGTTGAGATGCATTTGCACCCGTAGCTGCATCTGCAGTGTCAGCAA
 
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rJMFF026O01- TACCCGGCATTTGCTTTTGGAACTGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
JMFF038H08+ TGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
JMFN042I02+ TACCCGGCATTTGCTTTTGGAACTGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
JMFF026O01+ TACCCGGCATTTGCTTTTGGAACTGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
rJMFF038H08- TACCCGGCATTTGCTTTTGGAACTGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
                      ____________________________________________________________
consensus TACCCGGCATTTGCTTTTGGAACTGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
 
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rJMFF026O01- GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
JMFF038H08+ GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
JMFN042I02+ GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
JMFF026O01+ GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
rJMFF038H08- GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
                      ____________________________________________________________
consensus GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
 
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rJMFF026O01- CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
JMFF038H08+ CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
JMFN042I02+ CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
JMFF026O01+ CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
rJMFF038H08- CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
                      ____________________________________________________________
consensus CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
 
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rJMFF026O01- TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
JMFF038H08+ TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
JMFN042I02+ TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
JMFF026O01+ TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
rJMFF038H08- TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
                      ____________________________________________________________
consensus TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
 
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rJMFF026O01- TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
JMFF038H08+ TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
JMFN042I02+ TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
JMFF026O01+ TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
rJMFF038H08- TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
                      ____________________________________________________________
consensus TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
 
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rJMFF026O01- TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
JMFF038H08+ TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
JMFN042I02+ TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
JMFF026O01+ TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
rJMFF038H08- TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
                      ____________________________________________________________
consensus TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
 
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rJMFF026O01- GCTTTTCTACATTCATCTCG
JMFF038H08+ GCTTTTCTACATTCATCTCG
JMFN042I02+ GCTTTTCTACATTCATCTCGACGACGATGCTTGAGGCGGCTGCAGACCGGGGGCGAGAGC
JMFF026O01+ GCTTTTCTACATTCATCTCGACGACGATGCTTGAGGCGGCTGCAGACCGGGGGCGAGAGC
rJMFF038H08- GCTTTTCTACATTCATCTCGACGACGATGCTTGAGGCGGCTGCAGACCGGGGGCGAGAGC
                      ____________________________________________________________
consensus GCTTTTCTACATTCATCTCGACGACGATGCTTGAGGCGGCTGCAGACCGGGGGCGAGAGC
 
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JMFN042I02+ AGCGACGGCAAGAGTGGCTGAGGGCGAGAGTGGCGACAGTTTGGCTAAGGTTGAAATGTC
JMFF026O01+ AGCGACGGCAAGAGTGGCTGAGGGCGAGAGTGGCGACAGTTTGGCTAAGGTTGAAATGTC
rJMFF038H08- AGCGACGGCAAGAGTGGCTGAGGGCGAGAGTGGCGACAGTTTGGCTAAGGNTGAAATGTC
                      ____________________________________________________________
consensus AGCGACGGCAAGAGTGGCTGAGGGCGAGAGTGGCGACAGTTTGGCTAAGGTTGAAATGTC
 
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JMFN042I02+ TTTGAAAGGACTACAGTCAAGAA
JMFF026O01+ TTTGAAAGGACTACAGTCAAGAAACTAAAACCTTAAC
rJMFF038H08- TTTGAAAGGACTACAGTCAAGAAACTAAAACCCTAACAGCCAATATCGGTTCTCGACGAA
                      ____________________________________________________________
consensus TTTGAAAGGACTACAGTCAAGAAACTAAAACCTTAACAGCCAATATCGGTTCTCGACGAA