Contig 011122:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001E04Sequence381011122 (4)ref|XP_009798658.1|4e-40PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Nicot437011122 (4)ref|XP_009798658.1|2e-42PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Nicot
JMFF037O04Sequence521011122 (4)ref|XP_009798658.1|7e-50PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Nicot527011122 (4)ref|XP_009798658.1|3e-49PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Nicot

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF001E04- CTCTCTTCGCGATCTGCAATTCTGCACCAAACGCACCTCGCCAAGGA
rJMFF001E04+ TCTTCGCGATCTGCAATTNTGCACCAAACGCNCCTCGCCAAGGA
JMFF037O04- TCTTCGCGATCTGCAATTCTGCACCAAACGCACCTCGCCAAGGA
rJMFF037O04+ TCTTCGCGATCTGCAATTCTGCACCAAACGCACCTCGCCAAGGA
                      ____________________________________________________________
consensus CTCTCTTCGCGATCTGCAATTCTGCACCAAACGCACCTCGCCAAGGA
 
. : . : . : . : . : . :
JMFF001E04- AAGAAAAGAGAAGGGAAAACATTGAATTTTGCAAACTAAAATGGCTTCTGGAGATGATCG
rJMFF001E04+ AAGAAAAGAGAAGGGAAAACATTGAANTTTGCAAACTAAAATGGCTTCTGGAGATGATCG
JMFF037O04- AAGAAAAGAGAAGGGAAAACATTGAATTTTGCAAACTAAAATGGCTTCTGGAGATGATCG
rJMFF037O04+ AAGAAAAGAGAAGGGAAAACATTGAATTTTGCAAACTAAAATGGCTTNTGGAGATGATCG
                      ____________________________________________________________
consensus AAGAAAAGAGAAGGGAAAACATTGAATTTTGCAAACTAAAATGGCTTCTGGAGATGATCG
 
. : . : . : . : . : . :
JMFF001E04- CGACCACTTGGCTGAATCACTCAATGACCTATTCACCAATGTCTCAAAGATGGTCAAGGG
rJMFF001E04+ NGNCCACTNGGCTGAATCACTCAANGACCTATTCNCCAATGTCTCAAAGATGGTCAAGGG
JMFF037O04- CGACCACTTGGCTGAATCACTCAATGACCTATTCACCAATGTCTCAAAGATGGTCAAGGG
rJMFF037O04+ CGACCACTTGGCTGAATCACTCAATGACCTATTCNCCAATGTCTCAAAGATGGTCAAGGG
                      ____________________________________________________________
consensus CGACCACTTGGCTGAATCACTCAATGACCTATTCACCAATGTCTCAAAGATGGTCAAGGG
 
. : . : . : . : . : . :
JMFF001E04- CGAGCTTCAGGAAACTAACAATCTACTCGAACTTTTGGAGAGAATGAATATACGAGTTGC
rJMFF001E04+ CGAGCTTCAGGAAACTANCAATNTACTNGAACTTTTGGAGAGAATGAATATANGAGTTGC
JMFF037O04- CGAGCTTCAGGAAACTAACAATCTACTCGAACTTTTGGAGAGAATGAATATACGAGTTGC
rJMFF037O04+ CGAGNTTCAGGAAACTAACAATNTACTCGAACTTTTGGAGAGAATGAATATNCGAGTTGC
                      ____________________________________________________________
consensus CGAGCTTCAGGAAACTAACAATCTACTCGAACTTTTGGAGAGAATGAATATACGAGTTGC
 
. : . : . : . : . : . :
JMFF001E04- TGAAGAGTATAAAGGCTTTGGTGATGTGGCTTCCGGGCTGAGAGTTTTTGTTGAGCAGCT
rJMFF001E04+ TGAAGAGTATAAAGGCTTTGGTGATGTGGCTTCCGGGNTGAGAGTTTTNGTTGAGCAGCT
JMFF037O04- TGAAGAGTATAAAGGCTTTGGTGATGTGGCTTCCGGGCTGAGAGTTTTTGTTGAGCAGCT
rJMFF037O04+ TGAAGAGTATAAAGGCTTTGGTGATGTGGCTTCCGGGNTGAGAGTTTTTGTTGAGCAGCT
                      ____________________________________________________________
consensus TGAAGAGTATAAAGGCTTTGGTGATGTGGCTTCCGGGCTGAGAGTTTTTGTTGAGCAGCT
 
. : . : . : . : . : . :
JMFF001E04- CAAGTCCAAAAGCGGTAGCTTTGACGAGTATGTGCAGCAGATTGATTCAATAGAGGGGCA
rJMFF001E04+ CAAGTCCAAAAGCGGTAGCTTTGACGAGTATGTGCAGCAGATTGATTCAATAGAGGGGCA
JMFF037O04- CAAGTCCAAAAGCGGTAGCTTTGACGAGTATGTGCAGCAGATTGATTCAATAGAGGGGCA
rJMFF037O04+ CAAGTCCAAAAGCGGTAGCTTTGACGAGTATGTGCAGCAGATTGATTCAATAGAGGGGCA
                      ____________________________________________________________
consensus CAAGTCCAAAAGCGGTAGCTTTGACGAGTATGTGCAGCAGATTGATTCAATAGAGGGGCA
 
. : . : . : . : . : . :
JMFF001E04- AGTAACTGAACTTGAAGCTGTAGTATCTATGCTT
rJMFF001E04+ AGTAACTGAACTTGAAGCTGTAGTATNTATGCTTGATAAGTATGTTTCTTTGTTGGAATC
JMFF037O04- AGTAACTGAACTTGAAGCTGTAGTATCTATGCTTGATAAGTATGTTTCTTTGTTGGAATC
rJMFF037O04+ AGTAACTGAACTTGAAGCTGTAGTATCTATGCTTGATAAGTATGTTTCTTTGTTGGAATC
                      ____________________________________________________________
consensus AGTAACTGAACTTGAAGCTGTAGTATCTATGCTTGATAAGTATGTTTCTTTGTTGGAATC
 
. : . : . : . : . : . :
rJMFF001E04+ AAAAGTTCAGTCTGNGTNCCATACTCCACC
JMFF037O04- AAAAGTTCAGTCTGTGTACCATACTCCACCTTCATGATGACTACACCTTTTAAATCCTCA
rJMFF037O04+ AAAAGTTCAGTCTGNGTNCCATACTCCACCTTCATGATGANTACACCTTTTAAATCCTCA
                      ____________________________________________________________
consensus AAAAGTTCAGTCTGTGTACCATACTCCACCTTCATGATGACTACACCTTTTAAATCCTCA
 
. : . : . : . : . : . :
JMFF037O04- TATTGTTCATTAATTTTACTCTTTCTTAGGGTGTGT
rJMFF037O04+ TANNGTTCATTAATNNTACTCTTTCNTAGGGNGTGTGGGTTCATGGGACAGACCCGAGGA
                      ____________________________________________________________
consensus TATTGTTCATTAATTTTACTCTTTCTTAGGGTGTGTGGGTTCATGGGACAGACCCGAGGA