Contig 011097:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031C19Sequence507007411 (2)ref|XP_009625733.1|2e-21PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial [Nicotiana tom619011097 (2)ref|XP_004228528.1|1e-68PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial [Solanum lycop
JMSF038P13Sequence611010798 (4)ref|XP_009788112.1|285PREDICTED: uncharacterized protein LOC104235970 [Nicotiana sylvestris]810011097 (2)ref|XP_002266488.1|6e-44PREDICTED: proteasome subunit beta type-6 [Vitis vinifera] emb|CBI24056.3| unnam

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038P13+ TCATATCTTGACTACT
                      ____________________________________________________________
consensus TCATATCTTGACTACT
 
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rJMSF038P13+ GATTCTAGTCTCCGAAAAAGCAACAAGAGTTCATTCGTTAAGTCTATGCAGTGCTGAGCA
                      ____________________________________________________________
consensus GATTCTAGTCTCCGAAAAAGCAACAAGAGTTCATTCGTTAAGTCTATGCAGTGCTGAGCA
 
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rJMSF038P13+ ACCGGCCTGGAGATGCAAGCAACTTTGTACAGGGAATTGGATCAGACTTCGGTTCGGATA
                      ____________________________________________________________
consensus ACCGGCCTGGAGATGCAAGCAACTTTGTACAGGGAATTGGATCAGACTTCGGTTCGGATA
 
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rJMSF038P13+ CACAGCTTGTATACAAACACTATGCTACCTTATACTTTGTATTACTATTTGATAATTCTG
                      ____________________________________________________________
consensus CACAGCTTGTATACAAACACTATGCTACCTTATACTTTGTATTACTATTTGATAATTCTG
 
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rJMSF038P13+ AGAATGAACTTGCTATGCTTGATCTAATACAAGAATATGCTTCAAACTGGGCTTATTGTT
                      ____________________________________________________________
consensus AGAATGAACTTGCTATGCTTGATCTAATACAAGAATATGCTTCAAACTGGGCTTATTGTT
 
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rJMSF038P13+ GGTGGCTGGGACAAACATGAAGGAGGTAAAATATNTGGGATACCCCTTGGAGGCACAATA
                      ____________________________________________________________
consensus GGTGGCTGGGACAAACATGAAGGAGGTAAAATATNTGGGATACCCCTTGGAGGCACAATA
 
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rJMSF038P13+ TTGGAGCAGCCTTTTGCTATTGGAGGATCAGGCTCTTCTTATTTATATGGTTTCTTTGAC
                      ____________________________________________________________
consensus TTGGAGCAGCCTTTTGCTATTGGAGGATCAGGCTCTTCTTATTTATATGGTTTCTTTGAC
 
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rJMSF038P13+ CAAGCATGGAAGGAAGGAATGACCCAAGAAGAAGCTGAGAAATTTGTGGTTAAAGCAGTG
                      ____________________________________________________________
consensus CAAGCATGGAAGGAAGGAATGACCCAAGAAGAAGCTGAGAAATTTGTGGTTAAAGCAGTG
 
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rJMSF038P13+ TCTCTTGCCATTGCGCGGGATGGTGCCAGTGGTGGCGTAGTTCGGACTGTTACTTGGCAA
rJMFF031C19+ TGGCGA
                      ____________________________________________________________
consensus TCTCTTGCCATTGCGCGGGATGGTGCCAGTGGTGGCGTAGTTCGGACTGTTACTTGGCGA
 
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rJMSF038P13+ AGATGCATACAAGAAAATACGAGTTGATGCTACACTTGTGCAACTCTACACAGCCTTTGC
rJMFF031C19+ AGATGCATACAAGAAAATACGAGCTGGTGCTACACTTGTGCAGCTCTACACAGCCCTTGC
                      ____________________________________________________________
consensus AGATGCATACAAGAAAATACGAGTTGGTGCTACACTTGTGCAGCTCTACACAGCCTTTGC
 
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rJMSF038P13+ ATATGGGGGGCCTGCC
rJMFF031C19+ ATATGGGGGGCCTGCCCTTATACCCAAGATAAAGGCCGAACTCACCCAATGTTTAGAAAG
                      ____________________________________________________________
consensus ATATGGGGGGCCTGCCCTTATACCCAAGATAAAGGCCGAACTCACCCAATGTTTAGAAAG
 
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rJMFF031C19+ GGACGGTTATAAGACAATCCACGAGGCCGTTGGAGCAGATTGCCGATAGTCTGGAGCAAC
                      ____________________________________________________________
consensus GGACGGTTATAAGACAATCCACGAGGCCGTTGGAGCAGATTGCCGATAGTCTGGAGCAAC
 
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rJMFF031C19+ AAGCAGTTGCTCTAGAGCTCTTGGAGCGACCTCGTTTATCCACATACAATAAAAATCTAG
                      ____________________________________________________________
consensus AAGCAGTTGCTCTAGAGCTCTTGGAGCGACCTCGTTTATCCACATACAATAAAAATCTAG
 
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rJMFF031C19+ TTACTAATTGAAGAGAAAGGTTCTCCCTGGATTTTCTTGGCTGACATTTGTGATATTTTA
                      ____________________________________________________________
consensus TTACTAATTGAAGAGAAAGGTTCTCCCTGGATTTTCTTGGCTGACATTTGTGATATTTTA
 
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rJMFF031C19+ ATGTATTCTTTTTGAATCTTATTCCCCTTTGTTTTGCCCCTCTGTGGGAGGGGTAGATTT
                      ____________________________________________________________
consensus ATGTATTCTTTTTGAATCTTATTCCCCTTTGTTTTGCCCCTCTGTGGGAGGGGTAGATTT
 
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rJMFF031C19+ TGACATGTAACATCTTTCTTCTTCAGTGGCTAACATTTGGTCTAAGTTTACATAATCAAG
                      ____________________________________________________________
consensus TGACATGTAACATCTTTCTTCTTCAGTGGCTAACATTTGGTCTAAGTTTACATAATCAAG