Contig 011089:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029B10Sequence561019539emb|CAN59952.1|4e-65hypothetical protein VITISV_006720 [Vitis vinifera]797011089 (6)
JMSF012N15Sequence452011089 (6)ref|XP_006358497.1|85.5PREDICTED: uncharacterized protein LOC102598318 [Solanum tuberosum]700011089 (6)ref|XP_009779222.1|216PREDICTED: uncharacterized protein LOC104228458 [Nicotiana sylvestris]
JMSF044H14Sequence820011089 (6)ref|XP_009779222.1|169PREDICTED: uncharacterized protein LOC104228458 [Nicotiana sylvestris]749011089 (6)ref|XP_009779222.1|199PREDICTED: uncharacterized protein LOC104228458 [Nicotiana sylvestris]
JMSF046N18Sequence522011089 (6)ref|XP_009779222.1|129PREDICTED: uncharacterized protein LOC104228458 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF044H14- ACATTCTACAAGTGCATTTCTGAGACCAAGTATTTGGCTATACCAGAATATTCACTA
                      ____________________________________________________________
consensus ACATTCTACAAGTGCATTTCTGAGACCAAGTATTTGGCTATACCAGAATATTCACTA
 
. : . : . : . : . : . :
rJMSF044H14- AAACCTGTCAGGCGCCTAGAATGGCTAAAAAAATAGGTGAGTTATCGGCAAATTGAACGA
rJMSF046N18- GTGAGTTATCGGCAAATTGAACGA
rJMSF012N15- GTGAGTTATCGGCAAATTGAACGA
                      ____________________________________________________________
consensus AAACCTGTCAGGCGCCTAGAATGGCTAAAAAAATAGGTGAGTTATCGGCAAATTGAACGA
 
. : . : . : . : . : . :
rJMSF044H14- AAAAAATGAAACCGATGGGTATAAGTTATTAGCGGAGCAAACTGCCATATTGCCTCACTG
rJMSF046N18- ANAAAATGAAACCGATGGGTATAAGTTATTAGCGGAGCAAACTGCCATATTGCCTCACTG
rJMSF012N15- AAAAAATGAAACCGATGGGTATAAGTTATTAGCGGAGCAAACTGCCATATTGCCTCACTG
                      ____________________________________________________________
consensus AAAAAATGAAACCGATGGGTATAAGTTATTAGCGGAGCAAACTGCCATATTGCCTCACTG
 
. : . : . : . : . : . :
rJMSF044H14- TCTAATATACACCAATTGCGAACAGCACTTGAGAAAAGCAGCAGCAGATTGGCGGAATTG
rJMSF046N18- TCTAATATACGCCAATTGCGAACAGNACTTGAGAAAAGCAGCAGCAGATTGGCGGANTTG
rJMSF012N15- TCTAATATACACCAATTGCGAACAGCACTTGAGAAAAGCAGCAGCAGATTGGCGGAATTG
                      ____________________________________________________________
consensus TCTAATATACACCAATTGCGAACAGCACTTGAGAAAAGCAGCAGCAGATTGGCGGAATTG
 
. : . : . : . : . : . :
rJMSF044H14- CCTAAACCAAATTCCTAAGAGTTTTGGTGAGTATCACCTGCTGTTGAATCTCCAGCACTT
rJMSF046N18- CCTAAACCAAATTCCTAAGAGTTTTGGTGAGTATCACCTGCTGTTGAATCTCCAGCACTT
rJMSF012N15- CCTAAACCAAATTCCTAAGAGTTTTGGTGAGTATCACCTGCTGTTGAATCTCCAGCACTT
                      ____________________________________________________________
consensus CCTAAACCAAATTCCTAAGAGTTTTGGTGAGTATCACCTGCTGTTGAATCTCCAGCACTT
 
. : . : . : . : . : . :
rJMSF044H14- GATGTTAGTTGGTGGTTACTTGGTTGCGGCAGGTAAGAGTAGGCGGCCACCGAAATGCCA
rJMSF046N18- GATGTTAGTTGGTGGTTACTTGGTTGCGGCAGGTAANAGTAGGCGGCCACCGAAATGCCA
rJMSF012N15- GATGTTAGTTGGTGGTTACTTGGTTGCGGCAGGTAAGAGTAGGCGGCCACCGAAATGCCA
                      ____________________________________________________________
consensus GATGTTAGTTGGTGGTTACTTGGTTGCGGCAGGTAAGAGTAGGCGGCCACCGAAATGCCA
 
. : . : . : . : . : . :
rJMSF044H14- ATGATGGCAGAAAGTCCCACACAACTCCATAGCCACTTATGCTGAGTCCTCCTCCGTTGT
rJMSF046N18- ATGATGGCAGAAAGTCCCACACAACTCCATAGCCACTTATGCTGAGTCCTCCTCCGTTGT
rJMSF012N15- ATGATGGCAGAAAGTCCCACACAACTCCATAGCCACTTATGCTGAGTCCTCCTCCGTTGT
                      ____________________________________________________________
consensus ATGATGGCAGAAAGTCCCACACAACTCCATAGCCACTTATGCTGAGTCCTCCTCCGTTGT
 
. : . : . : . : . : . :
rJMSF044H14- CTTTGCTTTCGTGCTGCATCAATGATTTCCTGATTCCTCTCTGACATTTCCCGATTAGCA
rJMSF046N18- CTTTGCTTTCGTGCTGCATCAATGATTTCCTGATTCCTCTCTGACATTTCCCGATTAGCA
rJMSF012N15- CTTTGCTTTCGTGCTGCATCAATGATTTCCTGATTCCTCTCTGACATTTCCCGATTAGCA
                      ____________________________________________________________
consensus CTTTGCTTTCGTGCTGCATCAATGATTTCCTGATTCCTCTCTGACATTTCCCGATTAGCA
 
. : . : . : . : . : . :
rJMSF044H14- GTCTCATAATACAATAACCTATCTCGCAGCCGAGAGATTTCCTGGTTTTTTGATTCAAGG
rJMSF046N18- GTCTCNTNATACAATAACCTATCTCGNAGCCGAGAGATTTCCTGGTTTTTTGATTCGAGG
rJMSF012N15- GTCTCATAATACAATAACCTATCTCGCAGCCGAGAGATTTCCTGGTTTTTTGATTCAAGG
JMSF044H14+ AGCCGAGAGATTTCCTGGTTTTTTGATTCAAGG
                      ____________________________________________________________
consensus GTCTCATAATACAATAACCTATCTCGCAGCCGAGAGATTTCCTGGTTTTTTGATTCAAGG
 
. : . : . : . : . : . :
rJMSF044H14- ATTGCCTCTGTAGCTAGTTCAGCTTCAGCACGTGATTGACCTTTTCCAATTGCTTCAGCA
rJMSF046N18- ATTGCCTCTGTANCNAGNTCAGCTTCAGCACGTGATTGACCTTTTCCAATTGCTTCAGCN
rJMSF012N15- ATTGCCTCTGTAGCTAGTTCAGCTTCAGCACGTGATTGACCTTTTCCAATTGCTTCAGCA
JMSF044H14+ ATNGCCTCTGTAGCTAGTTCAGCTTCAGCACGTGATTGACCTTTTCCAATTGCTTCAGCA
                      ____________________________________________________________
consensus ATTGCCTCTGTAGCTAGTTCAGCTTCAGCACGTGATTGACCTTTTCCAATTGCTTCAGCA
 
. : . : . : . : . : . :
rJMSF044H14- ACAAATCTAGCAACAATTACTTCCTGCAAAAGATTCTCAATTGCGGCAGGCTCAATCTGC
rJMSF046N18- ACAANTCTNGCATCAATT
rJMSF012N15- ACAAATCTAGCAACAATTACTTCCTGCAAAAGATTCTCAATTGCGGCAGGCTCAATCTGC
JMSF044H14+ ACAAATCTAGCAACAATTACTTCCTGCAAAAGATTCTCAATTGCGGCAGGCTCAATCTGC
                      ____________________________________________________________
consensus ACAAATCTAGCAACAATTACTTCCTGCAAAAGATTCTCAATTGCGGCAGGCTCAATCTGC
 
. : . : . : . : . : . :
rJMSF044H14- ATACCACCAATGACAGCTGATGGCAAAGGGAGCGTTAAGCCTGCCTCAGATAGAACGTTA
rJMSF012N15- ATACCACCAATGACAGCTGATGGCAAAGGGAGCGTTAAGCCTGCCTCAGATAGAACGTTA
JMSF044H14+ ATACCACCAATGACAGCTGATGGCAAAGGGAGCGTTAAGCCTGCCTCAGATAGAACGTTA
                      ____________________________________________________________
consensus ATACCACCAATGACAGCTGATGGCAAAGGGAGCGTTAAGCCTGCCTCAGATAGAACGTTA
 
. : . : . : . : . : . :
rJMSF044H14- CTGATTCTCTGCCACTGGCTGCACATCATATT
rJMSF012N15- CTGATTCTCTGCCACTGGCTGCACATCATATTAAGATCATCTTCAGCAGCCTTTCTTTTT
JMSF044H14+ CTGATTCTCTGCCACTGGCTGCACATCATATTAAGATCATCTTCAGCAGCCTTTCTTTTT
                      ____________________________________________________________
consensus CTGATTCTCTGCCACTGGCTGCACATCATATTAAGATCATCTTCAGCAGCCTTTCTTTTT
 
. : . : . : . : . : . :
rJMSF012N15- TCAATTTC
JMSF044H14+ TCAATTTCCTGGAGGAGTTGGAGCTTTGTGGTTTGCAGTTCCGATTCCATAGCAACGGTA
                      ____________________________________________________________
consensus TCAATTTCCTGGAGGAGTTGGAGCTTTGTGGTTTGCAGTTCCGATTCCATAGCAACGGTA
 
. : . : . : . : . : . :
JMSF044H14+ AAGGAATGTACACTTGAAACAGACCCATCGGAGAACTCTTCACTTGCATCAAAAAAGTCT
                      ____________________________________________________________
consensus AAGGAATGTACACTTGAAACAGACCCATCGGAGAACTCTTCACTTGCATCAAAAAAGTCT
 
. : . : . : . : . : . :
JMSF044H14+ CCTTGAGCAGACGCAAAGCTCTGGCAATCAAGTCCTCTCGCCTCACTCGCACTTCCGACA
                      ____________________________________________________________
consensus CCTTGAGCAGACGCAAAGCTCTGGCAATCAAGTCCTCTCGCCTCACTCGCACTTCCGACA
 
. : . : . : . : . : . :
JMSF044H14+ ATCGACAAATCACACTTCGGATCCAAAAACTCGTCGTATCTCTCCTCGAGCCCCTCGATT
                      ____________________________________________________________
consensus ATCGACAAATCACACTTCGGATCCAAAAACTCGTCGTATCTCTCCTCGAGCCCCTCGATT
 
. : . : . : . : . : . :
JMSF044H14+ CTATCTCCAACCACTTCCGGAGTCCCAAAACAATCATCCTCCGCCAATTCCCCGTCCACA
                      ____________________________________________________________
consensus CTATCTCCAACCACTTCCGGAGTCCCAAAACAATCATCCTCCGCCAATTCCCCGTCCACA
 
. : . : . : . : . : . :
JMSF044H14+ TCACCAATGCACTGAAAAGTCAAATCACTCTCTTCGTATTCGTCTTCGTCGCCCTTCTTC
                      ____________________________________________________________
consensus TCACCAATGCACTGAAAAGTCAAATCACTCTCTTCGTATTCGTCTTCGTCGCCCTTCTTC
 
. : . : . : . : . : . :
JMSF044H14+ TCCCCCTGCTCGCCTCCCTTCCTCCCCGAAACTTCAAATCCGTCGATTTTCCGGAGTTAT
JMSF012N15+ TTCCGGAGTTAT
                      ____________________________________________________________
consensus TCCCCCTGCTCGCCTCCCTTCCTCCCCGAAACTTCAAATCCGTCGATTTTCCGGAGTTAT
 
. : . : . : . : . : . :
JMSF044H14+ GTACAGAGCCGGAGATATGTATATGTGATTCGGAGCTTGAGGCTTTGTGTTCTCCGCCCC
JMSF012N15+ GTACAGAGCCGGAGATATGTATATGTGATTCGGAGCTTGAGGCTTTGTGTTCTCCGCCCC
                      ____________________________________________________________
consensus GTACAGAGCCGGAGATATGTATATGTGATTCGGAGCTTGAGGCTTTGTGTTCTCCGCCCC
 
. : . : . : . : . : . :
JMSF044H14+ GTCTCCCCTCCCCTCCTCCTCTTCAGTAGCACCATTCCTACCAAAACCGCGGTTGCTAAG
JMSF012N15+ GTCTCCCCTCCCCTCCTCCTCTTCAGTAGCACCATTCCTACCAACACCGCGGTTGCTAAG
rJMFF029B10+ GCTAAG
                      ____________________________________________________________
consensus GTCTCCCCTCCCCTCCTCCTCTTCAGTAGCACCATTCCTACCAACACCGCGGTTGCTAAG
 
. : . : . : . : . : . :
JMSF044H14+ TGT
JMSF012N15+ TGTAGTCGTAATTTGGTTGGAATCCAAGGGCTTTTTGTACGAATCTCGAACGCGCGGTTC
rJMFF029B10+ TGTAGTCGTAATTTGGTTGGAATCCAAGGGCTTTCTGTACGAATCTCGAACGCGCGGTTC
                      ____________________________________________________________
consensus TGTAGTCGTAATTTGGTTGGAATCCAAGGGCTTTTTGTACGAATCTCGAACGCGCGGTTC
 
. : . : . : . : . : . :
JMSF012N15+ GAGTAGATTCTCTAGCGCGATGCTTGTGAAAGTCGGCATAACTGGCAGTACCGGCTGCTA
rJMFF029B10+ GAGTAGATTCTCCAGCGCGATGCTTGTGAAAGTCGGCATAACTGGCAGTACCGGCTGCTA
                      ____________________________________________________________
consensus GAGTAGATTCTCTAGCGCGATGCTTGTGAAAGTCGGCATAACTGGCAGTACCGGCTGCTA
 
. : . : . : . : . : . :
JMSF012N15+ GGGTTGGCTTACGACGCCGGCGAAGATGGAGGAGACTTGGCGGCTTCGCCCTCTACCTCT
rJMFF029B10+ GGGTTGGCTTACGACGCCGGCGAAGATGGAGGAGACTTGGCGGCTTCGCCCTCTACCTCT
                      ____________________________________________________________
consensus GGGTTGGCTTACGACGCCGGCGAAGATGGAGGAGACTTGGCGGCTTCGCCCTCTACCTCT
 
. : . : . : . : . : . :
JMSF012N15+ TTCTAGTATGAAAATGAAAGAGACGAAATGTAAAGATGTTACTGTGCTTGGGGACTTGGG
rJMFF029B10+ TTCTAGTATGAAAATGAAAGAGACGAAATGTAAAGATGTTACTGTGCTTGGGGACTTGGG
                      ____________________________________________________________
consensus TTCTAGTATGAAAATGAAAGAGACGAAATGTAAAGATGTTACTGTGCTTGGGGACTTGGG
 
. : . : . : . : . : . :
JMSF012N15+ GTTTTAGAGATGGCATTTTCGGC
rJMFF029B10+ GTTTTAGAGATGGCATTTTCGGCGGAGAATTAAAACTACTCCCAGTCCCATATATATAAT
                      ____________________________________________________________
consensus GTTTTAGAGATGGCATTTTCGGCGGAGAATTAAAACTACTCCCAGTCCCATATATATAAT
 
. : . : . : . : . : . :
rJMFF029B10+ TCCTCTTTCCGTTTTCGACTCTATGTATGTATCTGAGTTTGTGTAGAACTTCTTATCCTT
                      ____________________________________________________________
consensus TCCTCTTTCCGTTTTCGACTCTATGTATGTATCTGAGTTTGTGTAGAACTTCTTATCCTT
 
. : . : . : . : . : . :
rJMFF029B10+ GTCATGTGACTCTTTATTTCTTATCCTTATCACACTTTGAATAATTCCTCTTTCCGTCCT
                      ____________________________________________________________
consensus GTCATGTGACTCTTTATTTCTTATCCTTATCACACTTTGAATAATTCCTCTTTCCGTCCT
 
. : . : . : . : . : . :
rJMFF029B10+ CATTATTAGTACTCTATGTATCTGAGTTTGTTTAGAACTTCTTATCCTTGTCAGAATGTG
                      ____________________________________________________________
consensus CATTATTAGTACTCTATGTATCTGAGTTTGTTTAGAACTTCTTATCCTTGTCAGAATGTG
 
. : . : . : . : . : . :
rJMFF029B10+ ACTCTCTACTTCTTATCCTTATCACACTTTGACTCTCTATTGTATATATATTCACATCTG
                      ____________________________________________________________
consensus ACTCTCTACTTCTTATCCTTATCACACTTTGACTCTCTATTGTATATATATTCACATCTG
 
. : . : . : . : . : . :
rJMFF029B10+ ATCTCATTGTAATCATGTTCAGAAAATACAATACAATAAGTTCTCATCTGGTATCAGTTA
                      ____________________________________________________________
consensus ATCTCATTGTAATCATGTTCAGAAAATACAATACAATAAGTTCTCATCTGGTATCAGTTA
 
. : . : . : . : . : . :
rJMFF029B10+ GCTAGGATTTTGTGATTCATAAAATCAAAATCAAAAAATCAAAATCAAGATCCGGTGAGT
                      ____________________________________________________________
consensus GCTAGGATTTTGTGATTCATAAAATCAAAATCAAAAAATCAAAATCAAGATCCGGTGAGT
 
. : . : . : . : . : . :
rJMFF029B10+ GTCACGTCTTTGCTGACCTTCAAGAAACATACTATCATTTAGCAGTAGCTTAATCTTTGT
                      ____________________________________________________________
consensus GTCACGTCTTTGCTGACCTTCAAGAAACATACTATCATTTAGCAGTAGCTTAATCTTTGT
 
. : . : . : . : . : . :
rJMFF029B10+ TTTGTGGTCCACCAAAGTTGGTATTCTGCTTTGCTTTGTTTTGAAATCAAAGCGGGGAGT
                      ____________________________________________________________
consensus TTTGTGGTCCACCAAAGTTGGTATTCTGCTTTGCTTTGTTTTGAAATCAAAGCGGGGAGT