| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007K23 | Sequence | 616 | 006047 (7) | ref|XP_009605315.1| | 9e-112 | PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis] | 523 | 011086 (5) | ref|XP_009783888.1| | 1e-26 | PREDICTED: protein transport protein SEC24 [Nicotiana sylvestris] |
| JMFF008P07 | Sequence | 618 | 006047 (7) | ref|XP_009605315.1| | 2e-112 | PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis] | 251 | 011086 (5) | |||
| JMFF010M19 | Sequence | 521 | 006047 (7) | ref|XP_009605315.1| | 2e-93 | PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis] | 704 | 011086 (5) | ref|XP_008360906.1| | 239 | PREDICTED: uncharacterized protein LOC103424589 [Malus domestica] |
| JMFF028I23 | Sequence | 500 | 006047 (7) | ref|XP_009605315.1| | 1e-85 | PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis] | 705 | 011086 (5) | gb|KDO58106.1| | 3e-64 | hypothetical protein CISIN_1g0053622mg, partial [Citrus sinensis] |
| JMFF039C21 | Sequence | 307 | 006047 (7) | ref|XP_009605315.1| | 5e-55 | PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis] | 572 | 011086 (5) | gb|KDO58106.1| | 2e-41 | hypothetical protein CISIN_1g0053622mg, partial [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
rJMFF010M19+ TCACCTTGCTATATATCCAATGCTAACTT
____________________________________________________________
consensus TCACCTTGCTATATATCCAATGCTAACTT
. : . : . : . : . : . :
rJMFF010M19+ CATATGCATCACCGGACAAACAAGCTTATCCCCGCCATTCCTTGAGCCGTGCTGCATTGA
rJMFF028I23+ CCCCGCCATTCCTTGAGCCGTGCTGCATTGA
____________________________________________________________
consensus CATATGCATCACCGGACAAACAAGCTTATCCCCGCCATTCCTTGAGCCGTGCTGCATTGA
. : . : . : . : . : . :
rJMFF010M19+ TAACAAGTGGCAGTCCGATATTTTTCCTTGATGCATTCACAAATCTCATTGTGTTCTATT
rJMFF028I23+ TAACAAGTGGCAGTCCGATATTTTTCCTTGATGCATTCACAAATCTCATTGTGTTCTATT
____________________________________________________________
consensus TAACAAGTGGCAGTCCGATATTTTTCCTTGATGCATTCACAAATCTCATTGTGTTCTATT
. : . : . : . : . : . :
rJMFF010M19+ CTTCTACAACTGGCCCTTCGCTTCCCTTTCCTCCACCTCAGGACTGTTTGTTGAGAACAA
rJMFF039C21+ ACTGACCCTTCGCTTCCCTTTCCTCCACCTCAGGACTGTTTGTTGAGAACAA
rJMFF007K23+ AA
rJMFF028I23+ CTTCTACAACTGACCCTTCGCTTCCCTTTCCTCCACCTCAGGACTGTTTGTTGAGAACAA
____________________________________________________________
consensus CTTCTACAACTGACCCTTCGCTTCCCTTTCCTCCACCTCAGGACTGTTTGTTGAGAACAA
. : . : . : . : . : . :
rJMFF010M19+ CTATAAACAAGCTGAAGCAAGAGCGATGCATCTCCCCGAAACTGATGTTTATCCGAGCAG
rJMFF039C21+ CTATAAACAAGCTGAAGCAAGAGCGATGCATCTCCCCGAAACTGATGTTTATCCGAGCAG
rJMFF007K23+ CTATAANCAAGCTGAAGCAAGAGCGATGCATCTCCCCGAAACTGATGTTTATCCGAGCAG
rJMFF028I23+ CTATAAACAAGCTGAAGCAAGAGCGATGCATCTCCCCGAAACTGATGTTTATCCGAGCAG
____________________________________________________________
consensus CTATAAACAAGCTGAAGCAAGAGCGATGCATCTCCCCGAAACTGATGTTTATCCGAGCAG
. : . : . : . : . : . :
rJMFF010M19+ GGCAGGATGATGCAACGCCATTCGAGAATTTTCTGATAGAGGAACAAGACGTAGAAGGGA
rJMFF039C21+ GGCAGGATGATGCAACGCCATTCGAGAATTTTCTGATAGAGGAACAAGACGTAGAAGGGA
rJMFF007K23+ GGCAGGATGATGCAACGCCATTCGAGAATTTTNTGATAGAGGAACAAGACGTAGAAGGGA
rJMFF028I23+ GGCAGGATGATGCAACGCCATTCGAGAATTTTCTGATAGAGGAACAAGACGTAGAAGGGA
____________________________________________________________
consensus GGCAGGATGATGCAACGCCATTCGAGAATTTTCTGATAGAGGAACAAGACGTAGAAGGGA
. : . : . : . : . : . :
rJMFF010M19+ ACGGGTTCACAAGTATCATGGGCTTCGTATCCTTCCTGGAAGAGATCCATCAGAGTGTGC
rJMFF039C21+ ACGGGTTCACAAGTATCATGGGCTTCGTATCCTTCCTGGAAGAGATCCATCAGAGTGTGC
rJMFF007K23+ ACGGGTTCACAAGTATCATGGGCTTCGTATCCTTCCTGGAAGAGATCCATCAGAGTGTGC
rJMFF028I23+ ACGGGTTCACAAGTATCATGGGCTTCGTATCCTTCCTGGAAGAGATCCATCAGAGTGTGC
____________________________________________________________
consensus ACGGGTTCACAAGTATCATGGGCTTCGTATCCTTCCTGGAAGAGATCCATCAGAGTGTGC
. : . : . : . : . : . :
rJMFF010M19+ TGGAGTACATGAAATAAGTTACTTTTTGCAACCATAAATTGTTACTAGAGGTGGAAAAAG
rJMFF008P07+ CCATAAANTGTTANTAGAGGTGGAAAAAG
rJMFF039C21+ TGGAGTACATGAAATAAGTTACTTTTTGCAACCATAAATTGTTACTAGAGGTGGAAAAAG
rJMFF007K23+ TGGAGTACATGAAATAAGTTACTTTTTGCAACCATAAATTGTTACTAGAGGTGGAAAAAG
rJMFF028I23+ TGGAGTACATGAAATAAGTTACTTTTTGCAACCATAAATTGTTACTAGAGGTGGAAAAAG
____________________________________________________________
consensus TGGAGTACATGAAATAAGTTACTTTTTGCAACCATAAATTGTTACTAGAGGTGGAAAAAG
. : . : . : . : . : . :
rJMFF010M19+ GAAGTAGTTGGGATTTTCTGCATTTGGTTGGTGACTGGTGAGTGCAAATTAGCTAGCTTC
rJMFF008P07+ GAAGTAGTNGGGATTTTCTGCATTTGGTTGGTGACTGGTGAGTGC-AATTAGCTAGCTTC
rJMFF039C21+ GAAGTAGTTGGGATTTTCTGCATTTGGTTGGTGACTGGTGAGTGCAAATTAGCTAGCTTC
rJMFF007K23+ GAAGTAGTTGGGATTTTCTGCATTTGGTTGGTGACTGGTGAGTGCAAATTAGCTAGCTTC
rJMFF028I23+ GAAGTAGTTGGGATTTTCTGCATTTGGTTGGTGACTGGTGAGTGCAAATTAGCTAGCTTC
____________________________________________________________
consensus GAAGTAGTTGGGATTTTCTGCATTTGGTTGGTGACTGGTGAGTGCAAATTAGCTAGCTTC
. : . : . : . : . : . :
rJMFF010M19+ AGTGCTTCATACAGACCAAGACAAGTGAACAGCAGAATCTCTTAATAGTTATTGGAAATT
rJMFF008P07+ AGTGCTTCATACAGACCAAGACAAGTGAACAGCAGAATCTCTTAATAGTTATTGGAAATT
rJMFF039C21+ AGTGCTTCATACAGACCAAGACAAGTGAACAGCAGAATCTCTTAATAGTTATTGGAAATT
rJMFF007K23+ AGTGCTTCATACAGACCAAGACAAGTGAACAGCAGAATCTNTTAATAGTTATTGGAAATT
rJMFF028I23+ AGTGCTTCATACAGACCAAGACAAGTGAACAGCAGAATCTCTTAATAGTTATTGGAAATT
____________________________________________________________
consensus AGTGCTTCATACAGACCAAGACAAGTGAACAGCAGAATCTCTTAATAGTTATTGGAAATT
. : . : . : . : . : . :
rJMFF010M19+ GCAAATTCTCTTTTCCTGATAGTGTCCATACTTCTTCGACATTGTGTTGCTTCGTGAACA
rJMFF008P07+ GCAAATTCTCTTTTCCTGATAGTGTCCATACTTCTTCGACATTGTGTTGCTTCGTGAACA
rJMFF039C21+ GCAAATTCTCTTTTCCTGATAGTGTCCATACTTCTTCGACATTGTGTTGCTTCGTGAACA
rJMFF007K23+ GCAAATTCTCTTTTCCTGATAGTGTCCATACTTCTTCGACATTGTGTTGCTTCGTGAACA
rJMFF028I23+ GCAAATTCTCTTTTCCTGATAGTGTCCATACTTCTTCGACATTGTGTTGCTTCGTGAACA
____________________________________________________________
consensus GCAAATTCTCTTTTCCTGATAGTGTCCATACTTCTTCGACATTGTGTTGCTTCGTGAACA
. : . : . : . : . : . :
rJMFF010M19+ TCACCAATTCACCATGGGGAACTGTTTTTTCAATAACAAAATTTGCAATGTAATACCTTA
rJMFF008P07+ TCACCAATTCACCATGGGGAACTGTTTTTTCAATAACAAAA
rJMFF039C21+ TCACCAATTCACCATGGGGAACTGTTTTTTCAATAACAAAATTTGCAATGTAATACCTTA
rJMFF007K23+ TCACCAATTCACCATGGGGAACTGTTTTTTCAATAACAAAATTTGCAATGTAATACCTNA
rJMFF028I23+ TCACCAATTCACCATGGGGAACTGTTTTTTCAATAACAAAATTTGCAATGTAATACCTTA
____________________________________________________________
consensus TCACCAATTCACCATGGGGAACTGTTTTTTCAATAACAAAATTTGCAATGTAATACCTTA
. : . : . : . : . : . :
rJMFF010M19+ TACCTAGCAGCTT
rJMFF039C21+ TACCTAGCAGCTTTTTGTACTATAAGCTTTTGTTTTCTT
rJMFF007K23+ TACCTAGCAGCTTNTTGTACTATAAGCTTNTGTTTTCTT
rJMFF028I23+ TACCTAGCAGCTTTTTGTACTATAAGCTTTTGTTTTCTTTTCCTGGAGAGTTAATTCCAA
____________________________________________________________
consensus TACCTAGCAGCTTTTTGTACTATAAGCTTTTGTTTTCTTTTCCTGGAGAGTTAATTCCAA