Contig 011074:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004K20Sequence481004853 (10)ref|XP_008394069.1|2e-60PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming]-like [Malus d712011074 (3)gb|AAO25536.1|1e-65cellulose synthase [Populus tremuloides]
JMFF025G15Sequence579004853 (10)ref|XP_008219478.1|9e-66PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Prunus mume]714011074 (3)gb|AAO25536.1|1e-65cellulose synthase [Populus tremuloides]
JMFF025J04Sequence712011074 (3)gb|AAO25536.1|2e-78cellulose synthase [Populus tremuloides]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF004K20+ TCTAAAAGTACTTGCCGGGATTGATA-CCAATTTCACCGTCACTTCAAAGGCGTCC
rJMFF025G15+ AAAAGTACTTGCCGGGATTGATA-CCAATTTCACCGTCACTTCAAAGGCGTCC
rJMFF025J04+ AAAAGTACTTGCCGGGATTGATACCCAATTTCACCGTCACTTCAAAGGCGTCC
                      ____________________________________________________________
consensus TCTAAAAGTACTTGCCGGGATTGATA-CCAATTTCACCGTCACTTCAAAGGCGTCC
 
. : . : . : . : . : . :
rJMFF004K20+ GATGAAGACGGAGATTTCGCCGAGCTTTACGTGTTCAAATGGACGTCCCTTCTCCATTCC
rJMFF025G15+ GATGAAGACGGAGATTTCGCCGAGCTTTACGTGTTCAAATGGACGTCCCTTCTCCATTCC
rJMFF025J04+ GATGAAGACGGAGATTTCGCCGAGCTTTACGTGTTCAAATGGACGTCCCTTCT-CATTCC
                      ____________________________________________________________
consensus GATGAAGACGGAGATTTCGCCGAGCTTTACGTGTTCAAATGGACGTCCCTTCTCCATTCC
 
. : . : . : . : . : . :
rJMFF004K20+ CCCAACCACAGTCCTCATAGTCAACCTAGTAGGCATAGTGGCGGGCGTCTCGTTCGCCAT
rJMFF025G15+ CCCAACCACAGTCCTCATAGTCAACCTAGTAGGCATAGTGGCGGGCGTCTCGTTCGCCAT
rJMFF025J04+ CCCAACCACAGTCCTCATAGTCAACCTAGTAGGCATAGTGGCGGGCGTCTCGTTCGCCAT
                      ____________________________________________________________
consensus CCCAACCACAGTCCTCATAGTCAACCTAGTAGGCATAGTGGCGGGCGTCTCGTTCGCCAT
 
. : . : . : . : . : . :
rJMFF004K20+ AAACAGCGGGTACCAGTCGTGGGGCCCTCTATTCGGGAGACTGTTCTTCGCCATTTGGGT
rJMFF025G15+ AAACAGCGGGTACCAGTCGTGGGGCCCTCTATTCGGGAGACTGTTCTTCGCCATTTGGGT
rJMFF025J04+ AAACAGCGGGTACCAGTCGTGGGGCCCTCTATTCGGGAGACTGTTCTTCGCCATTTGGGT
                      ____________________________________________________________
consensus AAACAGCGGGTACCAGTCGTGGGGCCCTCTATTCGGGAGACTGTTCTTCGCCATTTGGGT
 
. : . : . : . : . : . :
rJMFF004K20+ GATCGTGCACTTGTATCCTTTCCTCAAAGGTCTATTGGGCAGGCAGAACCGCACTCCTAC
rJMFF025G15+ GATCGTGCACTTGTATCCTTTCCTCAAAGGTCTATTGGGCAGGCAGAACCGCACTCCTAC
rJMFF025J04+ GATCGTGCACTTGTATCCTTTCCTCAAAGGTCTATTGGGCAGGCAGAACCGCACTCCTAC
                      ____________________________________________________________
consensus GATCGTGCACTTGTATCCTTTCCTCAAAGGTCTATTGGGCAGGCAGAACCGCACTCCTAC
 
. : . : . : . : . : . :
rJMFF004K20+ TATCGTCATCGTCTGGTCCATACTTCTCGCATCCATCTTCTCGTTGCTATGGGTGCGAAT
rJMFF025G15+ TATCGTCATCGTCTGGTCCATACTTCTCGCATCCATCTTCTCGTTGCTATGGGTGCGAAT
rJMFF025J04+ TATCGTCATCGTCTGGTCCATACTTCTCGCATCCATCTTCTCGTTGCTATGGGTGCGAAT
                      ____________________________________________________________
consensus TATCGTCATCGTCTGGTCCATACTTCTCGCATCCATCTTCTCGTTGCTATGGGTGCGAAT
 
. : . : . : . : . : . :
rJMFF004K20+ CGACCCCTTCACCTCCGACAGCGCCAAAGCGGCCGCTGGAGGTCAATGTGGCATCAACTG
rJMFF025G15+ CGACCCCTTCACCTCCGACAGCGCCAAAGCGGCCGCTGGAGGTCAATGTGGCATCAACTG
rJMFF025J04+ CGACCCCTTCACCTCCGACAGCGCCAAAGCGGCCGCTGGAGGTCAATGTGGCATCAACTG
                      ____________________________________________________________
consensus CGACCCCTTCACCTCCGACAGCGCCAAAGCGGCCGCTGGAGGTCAATGTGGCATCAACTG
 
. : . : . : . : . : . :
rJMFF004K20+ CTAAGTTGCCCATTTTTCGTTAGACGAAGTTGTCTGCAATCACCAAGCCCGCACTAAACA
rJMFF025G15+ CTAAGTTGCCCATTTTTCGTTAGACGAAGTTGTCTGCAATCACCAAGCCCGCACTAAACA
rJMFF025J04+ CTAAGTTGCCCATTTTTCGTTAGACGAAGTTGTCTGCAATCACCAAGCCCGCACTAAACA
                      ____________________________________________________________
consensus CTAAGTTGCCCATTTTTCGTTAGACGAAGTTGTCTGCAATCACCAAGCCCGCACTAAACA
 
. : . : . : . : . : . :
rJMFF004K20+ CCGCGTGCACCCTCATGTATATAGGCAAGAAACCAAACCGAGGTGCGAAATTGCACGCGG
rJMFF025G15+ CCGCGTGCACCCTCATGTATATAGGCAAGAAACCAAACCGAGGTGCGAAATTGCACGCGG
rJMFF025J04+ CCGCGTGCACCCTCATGTATATAGGCAAGAAACCAAACCGAGGTGCGAAATTGCACGCGG
                      ____________________________________________________________
consensus CCGCGTGCACCCTCATGTATATAGGCAAGAAACCAAACCGAGGTGCGAAATTGCACGCGG
 
. : . : . : . : . : . :
rJMFF004K20+ GATTGCCTTATAGTTAAAATTATTGTACTGTTGTATCATGTCTCTTTGCAAGAAAGTGTA
rJMFF025G15+ GATTGCCTTATAGTTAAAATTATTGTACTGTTGTATCATGTCTCTTTGCAAGAAAGTGTA
rJMFF025J04+ GATTGCCTTATAGTTAAAATTATTGTACTGTTGTATCATGTCTCTTTGCAAGAAAGTGTA
                      ____________________________________________________________
consensus GATTGCCTTATAGTTAAAATTATTGTACTGTTGTATCATGTCTCTTTGCAAGAAAGTGTA
 
. : . : . : . : . : . :
rJMFF004K20+ GGTGTGAATGATGGACCTCAATTTGTTACATTTTTTAGTGTAAAGTATTCTTACAGGTTG
rJMFF025G15+ GGTGTGAATGATGGACCTCAATTTGTTACATTTTTTAGTGTAAAGTATTCTTACAGGTTG
rJMFF025J04+ GGTGTGAATGATGGACCTCAATTTGTTACATTTTTTAGTGTAAAGTATTCTTACAGGTTG
                      ____________________________________________________________
consensus GGTGTGAATGATGGACCTCAATTTGTTACATTTTTTAGTGTAAAGTATTCTTACAGGTTG
 
. : . : . : . : . : . :
rJMFF004K20+ GTTATTCCTTGTTGAGAAACATGTATGTATTCATGGCAGCAGCTTCAGATACACCTT
rJMFF025G15+ GTTATTCCTTGTTGAGAAACATGTATGTATTCATGGCAGCAGCTTCAGATACACCTT
rJMFF025J04+ GTTATTCCTTGTTGAGAAACATGTATGTATTCATGGCAGCAGCTTCAGATACACCTTCAA
                      ____________________________________________________________
consensus GTTATTCCTTGTTGAGAAACATGTATGTATTCATGGCAGCAGCTTCAGATACACCTTCAA