Contig 011071:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025F22Sequence569007431 (2)ref|XP_004246645.1|3e-66PREDICTED: probable receptor-like protein kinase At5g47070 isoform X1 [Solanum 764011071 (2)ref|XP_011094637.1|5e-50PREDICTED: probable receptor-like protein kinase At5g47070 isoform X2 [Sesamum
JMFF035H08Sequence571007431 (2)ref|XP_004246645.1|3e-66PREDICTED: probable receptor-like protein kinase At5g47070 isoform X1 [Solanum 682011071 (2)ref|XP_011094636.1|6e-31PREDICTED: probable receptor-like protein kinase At5g47070 isoform X1 [Sesamum

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF025F22+ CACGATGTGTGGAGCTACGGGATGTTCCTCTACGAGCTCATCAC
                      ____________________________________________________________
consensus CACGATGTGTGGAGCTACGGGATGTTCCTCTACGAGCTCATCAC
 
. : . : . : . : . : . :
rJMFF035H08+ GAACGAGCAGAAGCTCTTGGACTGGGT
rJMFF025F22+ GGGCAGGCGGCCATTGGATCGCAATCGTCCCAAGAACGAGCAGAAGCTCTTGGACTGGGT
                      ____________________________________________________________
consensus GGGCAGGCGGCCATTGGATCGCAATCGTCCCAAGAACGAGCAGAAGCTCTTGGACTGGGT
 
. : . : . : . : . : . :
rJMFF035H08+ AAAGCCACACACAACAGATCCTAAGAAGTTTAGGAAGATATTAGACCCGAGACTTGAAGG
rJMFF025F22+ AAAGCCACACACAACAGATCCTAAGAAGTTTAGGAAGATATTAGACCCGAGACTTGAAGG
                      ____________________________________________________________
consensus AAAGCCACACACAACAGATCCTAAGAAGTTTAGGAAGATATTAGACCCGAGACTTGAAGG
 
. : . : . : . : . : . :
rJMFF035H08+ GAATGTCTTAAGATCAGCTCACAAGCTCTCTCTTATTGCCAACCGCTGTTTAGTCAAGCA
rJMFF025F22+ GAATGTCTTAAGATCAGCTCACAAGCTCTCTCTTATTGCCAACCGCTGTTTAGTCAAGCA
                      ____________________________________________________________
consensus GAATGTCTTAAGATCAGCTCACAAGCTCTCTCTTATTGCCAACCGCTGTTTAGTCAAGCA
 
. : . : . : . : . : . :
rJMFF035H08+ CCCAAAGTCACGTCCGACAATGAGCGAAGTCCTGGAAATGGTGAGCAATGTTGTCGAAGC
rJMFF025F22+ CCCAAAGTCACGTCCGACAATGAGCGAAGTCCTGGAAATGGTGAGCAATGTTGTCGAAGC
                      ____________________________________________________________
consensus CCCAAAGTCACGTCCGACAATGAGCGAAGTCCTGGAAATGGTGAGCAATGTTGTCGAAGC
 
. : . : . : . : . : . :
rJMFF035H08+ GCCAGCGGGAATGGGGAATCCTAGACCGGCTATAAAATCCCCCGAACCCGTTCGTGCTAA
rJMFF025F22+ GCCAGCGGGAATGGGGAATCCTAGACCGGCTATAAAATCCCCCGAACCCGTTCGTGCTAA
                      ____________________________________________________________
consensus GCCAGCGGGAATGGGGAATCCTAGACCGGCTATAAAATCCCCCGAACCCGTTCGTGCTAA
 
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rJMFF035H08+ AGAAGGAACTGAGAGAAAAGGTAAAAGAAGGATCATTAATATCAGAATTGGAGATAGTGG
rJMFF025F22+ AGAAGGAACTGAGAGAAAAGGTAAAAGAAGGATCATTAATATCAGAATTGGAGATAGTGG
                      ____________________________________________________________
consensus AGAAGGAACTGAGAGAAAAGGTAAAAGAAGGATCATTAATATCAGAATTGGAGATAGTGG
 
. : . : . : . : . : . :
rJMFF035H08+ GTGGTTGGTTCGTATACTGTCGCTAAAACGTGCTAAGATGAACTCCTGATTGTTGCTGCA
rJMFF025F22+ GTGGTTGGTTCGTATACTGTCGCTAAAACGTGCTAAGATGAACTCCTGATTGTTGCTGCA
                      ____________________________________________________________
consensus GTGGTTGGTTCGTATACTGTCGCTAAAACGTGCTAAGATGAACTCCTGATTGTTGCTGCA
 
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rJMFF035H08+ TTTGCATAACATGGAAGAACACTTAACTCTAGACGACTTCCCTTTAGGCGCCGCCCTTGA
rJMFF025F22+ TTTGCATAACATGGAAGAACACTTAACTCTAGACGACTTCCCTTTAGGCGCCGCCCTTGA
                      ____________________________________________________________
consensus TTTGCATAACATGGAAGAACACTTAACTCTAGACGACTTCCCTTTAGGCGCCGCCCTTGA
 
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rJMFF035H08+ TAACAGTAGTGATCCTCAGCAGTGTGCAGAATCTCCACAAAGAAAAGCTTGCACTTTGTT
rJMFF025F22+ TAACAGTAGTGATCCTCAGCAGTGTGCAGAATCTCCACAAAGAAAAGCTTGCACTTTGTT
                      ____________________________________________________________
consensus TAACAGTAGTGATCCTCAGCAGTGTGCAGAATCTCCACAAAGAAAAGCTTGCACTTTGTT
 
. : . : . : . : . : . :
rJMFF035H08+ AGCAGATTCTGAAGCTTTTGCAGATATATATGCAGAATGTGTAATGGTTTCTGTTAGTGG
rJMFF025F22+ AGCAGATTCTGAAGCTTTTGCAGATATATATGCAGAATGTGTAATGGTTTCTGTTAGTGG
                      ____________________________________________________________
consensus AGCAGATTCTGAAGCTTTTGCAGATATATATGCAGAATGTGTAATGGTTTCTGTTAGTGG
 
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rJMFF035H08+ CTTTCATCTTTTCAAGCTTGGTGTTGAGATGAAAAACATTGTTAATTCTTGTACTGCCTG
rJMFF025F22+ CTTTCATCTTTTCAAGCTTGGTGTTGAGATGAAAAACATTGTTAATTCTTGTACTGCCTG
                      ____________________________________________________________
consensus CTTTCATCTTTTCAAGCTTGGTGTTGAGATGAAAAACATTGTTAATTCTTGTACTGCCTG
 
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rJMFF035H08+ CAAACTGCAGAATTTTGTGAGATTTTGTACTCCATAAAACAAGAAATGA
rJMFF025F22+ CAAACTGCAGAATTTTGTGAGATTTTGTACTCCATAAAACAAGAAATGAGAAAATATATG
                      ____________________________________________________________
consensus CAAACTGCAGAATTTTGTGAGATTTTGTACTCCATAAAACAAGAAATGAGAAAATATATG