Contig 011063:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015J10Sequence524011063 (13)
JMFF023I19Sequence169011063 (13)535011063 (13)
JMFF029E19Sequence505011063 (13)
JMFF035J08Sequence436011063 (13)ref|XP_008370564.1|0.001PREDICTED: cell wall / vacuolar inhibitor of fructosidase 1-like [Malus domesti509011063 (13)
JMFF037G06Sequence416011063 (13)504011063 (13)
JMFN006F13Sequence487011063 (13)
JMFN009M03Sequence511011063 (13)
JMFS012D05Sequence503011063 (13)
JMFS117G04Sequence513011063 (13)
JMFS126H03Sequence501011063 (13)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS012D05+ CAAGCTTAA
JMFS126H03+ AAGCTTAA
JMFN009M03+ CAAGCTTAA
JMFS117G04+ CAAGCTTAA
                      ____________________________________________________________
consensus CAAGCTTAA
 
. : . : . : . : . : . :
JMFS012D05+ TCACATTTTATTGGATTTATTAAAGCATTATTCCAATTCTAATCAGTTCTTAATGACGTT
JMFS126H03+ TCACATTTTATTGGATTTATTAAAGCATTATTCCAATTCTAATCAGTTCTTAATGACGTT
JMFN006F13+ GGATTTATTAAAGCATTATTCCAATTCTAATCAGTTCTTAATGACGTT
JMFN009M03+ TCACATTTTATTGGATTTATTAAAGCATTATTCCAATTCTAATCAGTTCTTAATGACGTT
JMFS117G04+ TCACATTTTATTGGATTTATTAAAGCATTATTCCAATTCTAATCAGTTCTTAATGACGTT
rJMFF035J08- TTTTATTGGATTTATTAAAGCATTATTCCAATTCTAATCAGTTCTTAATGACGTT
rJMFF029E19- TGGATTTATTAAAGCATTATTCCAATTCTAATCAGTTCTTAATGACGTT
rJMFF015J10- TGGATTTATTAAAGCATTATTCCAATTCTAATCAGTTCTTAATGACGTT
rJMFF037G06- TGGATTTATTAAAGCATTATTCCAATTCTAATCAGTTCTTAATGACGTT
rJMFF023I19- TTTTATTGGATTTATTAAAGCATTATTCCAATTCTAATCAGTTCTTAATGACGTT
                      ____________________________________________________________
consensus TCACATTTTATTGGATTTATTAAAGCATTATTCCAATTCTAATCAGTTCTTAATGACGTT
 
. : . : . : . : . : . :
JMFS012D05+ AAGAACATCCACTGAAATACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
JMFS126H03+ AAGAACATCCACTGAAATACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
JMFN006F13+ AAGAACATCCACTGAAATACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
JMFN009M03+ AAGAACATCCACTGAAATACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
JMFS117G04+ AAGAACATCCACTGAAATACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
rJMFF035J08- AAGAACATCCACTGAAATACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
rJMFF029E19- AAGAACATCCACTGAAATACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
rJMFF015J10- AAGAACATCCACTGAAATACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
JMFF035J08+ ACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
JMFF037G06+ ATCCTCAGCATTAGAACAAGG
rJMFF037G06- AAGAACATCCACTGAAATACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
rJMFF023I19- AAGAACATCCACTGAAATACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
                      ____________________________________________________________
consensus AAGAACATCCACTGAAATACTAAGAAGCGTGAGGACATAATCCTCAGCATTAGAACAAGG
 
. : . : . : . : . : . :
JMFS012D05+ AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTC
JMFS126H03+ AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTC
JMFN006F13+ AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTC
JMFN009M03+ AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTC
JMFS117G04+ AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTC
rJMFF035J08- AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTC
rJMFF029E19- AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTC
rJMFF015J10- AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTC
JMFF035J08+ AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTN
JMFF037G06+ AACTNCATCCTTCATGNGATATTTAACCGCCGGNGCATGATGTTTGGTCGTCAACTTNTT
rJMFF037G06- AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTC
rJMFF023I19- AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTC
                      ____________________________________________________________
consensus AACTACATCCTTCATGCGATATTTAACCGCCGGCGCATGATGTTTGGTCGTCAACTTCTC
 
. : . : . : . : . : . :
JMFS012D05+ TATGGCATCTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCA
JMFS126H03+ TATGGCATCTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCA
JMFN006F13+ TATGGCATCTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCA
JMFN009M03+ TATGGCATCTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCA
JMFS117G04+ TATGGCATCTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCA
rJMFF035J08- TATGGCATCTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCA
rJMFF029E19- TATGGCATCTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCA
rJMFF015J10- TATGGCATCTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCA
JMFF035J08+ TATGGCATNTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCN
JMFF037G06+ TATGGCATTTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCN
rJMFF037G06- TATGGCATCTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCA
rJMFF023I19- TATGGCATCTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCA
                      ____________________________________________________________
consensus TATGGCATCTTCCCCGCTGCCGCCGCGGTCGCCAACAAGTTTCCGGTACGCCTCCGGGCA
 
. : . : . : . : . : . :
JMFS012D05+ CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACAC
JMFS126H03+ CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACAC
JMFN006F13+ CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACAC
JMFN009M03+ CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACAC
JMFS117G04+ CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACAC
rJMFF035J08- CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACAC
rJMFF029E19- CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACAC
rJMFF015J10- CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACAC
JMFF035J08+ CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACNC
JMFF037G06+ CCTTTCCTTCAGATCATCAATCNCTGAAACTGCTTTATCGAGGACGATTATGNTAAACNC
rJMFF037G06- CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACAC
rJMFF023I19- CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACAC
                      ____________________________________________________________
consensus CCTTTCCTTCAGATCATCAATCACTGAAACTGCTTTATCGAGGACGATTATGCTAAACAC
 
. : . : . : . : . : . :
JMFS012D05+ TGTCACGTCGCCATCGGTGCTGCGGGGATCGGATTCTATGACGGAAGCGCAGAGATCGGG
JMFS126H03+ TGTCACGTCGCCATCGGTGCTGCGGGGATCGGATTCTATGACGGAAGCGCAGAGATCGGG
JMFN006F13+ TGTCACGTCGCCATCGGTGCTGCGGGGATCGGATTCTATGACGGAAGCGCAGAGATCGGG
JMFN009M03+ TGTCACGTCGCCATCGGTGCTGCGGGGATCGGATTCTATGACGGAAGCGCAGAGATCGGG
JMFS117G04+ TGTCACGTCGCCATCGGTGCTGCGGGGATCGGATTCTATGACGGAAGCGCAGAGATCGGG
rJMFF035J08- TGTCACGTCGCCATCGGTGCTGCGGGGATCGGATTCTATGACGGAAGCGCAGAGATCGGG
rJMFF029E19- TGTCACGTCGCCATCGGTGCTGCGGGGATCGGATTCTATGACGGAAGCGCAGAGATCGGG
rJMFF015J10- TGTCACGTCGCCATCGGTGCTGCGGGGATCGGATTCTATGACGGAAGCGCAGAGATCGGG
JMFF035J08+ TGTCACGTCGCCATCGGTGCTGCGGGGATCGGATTNTATGACGGAAGCGCAGAGATCGGG
JMFF037G06+ TGTCNCGTCGCCATCGGTGCTGCGGGGATNGGATTTTATGACGGAAGCGCAGAGATCGGG
JMFF023I19+ GGAAGCGCAGAGATNGGG
rJMFF037G06- TGTCACGTCGCCATCGGTGCTGCGGGGATCGGATTCTATGACGGAAGCGCAGAGATCGGG
rJMFF023I19- TGTCACGTCGACATCGGTGCTGCGGGGATCGGATTCTATGACGGAAGCGCAGAGATCGGG
                      ____________________________________________________________
consensus TGTCACGTCGCCATCGGTGCTGCGGGGATCGGATTCTATGACGGAAGCGCAGAGATCGGG
 
. : . : . : . : . : . :
JMFS012D05+ CGCTTGGGTCTCCGCGCAAGCGGTCTGGATTACTAGGGCGTGGCCGTCTGCGGCGGCGGA
JMFS126H03+ CGCTTGGGTCTCCGCGCAAGCGGTCTGGATTACTAGGGCGTGGCCGTCTGCGGCGGCGGA
JMFN006F13+ CGCTTGGGTCTCCGCGCAAGCGGTCTGGATTACTAGGGCGTGGCCGTCTGCGGCGGCGGA
JMFN009M03+ CGCTTGGGTCTCCGCGCAAGCGGTCTGGATTACTAGGGCGTGGCCGTCTGCGGCGGCGGA
JMFS117G04+ CGCTTGGGTCTCCGCGCAAGCGGTCTGGATTACTAGGGCGTGGCCGTCTGCGGCGGCGGA
rJMFF035J08- CGCTTGGGTCTCCGCGCAAGCGGTCTGGATTACTAGGGCGTGGCCGTCTGCGGCGGCGGA
rJMFF029E19- CGCTTGGGTCTCCGCGCAAGCGGTCTGGATTACTAGGGCGTGGCCGTCTGCGGCGGCGGA
rJMFF015J10- CGCTTGGGTCTCCGCGCAAGCGGTCTGGATTACTAGGGCGTGGCCGTCTGCGGCGGCGGA
JMFF035J08+ CGCTTGGGTCTCCGCGCAAGCGGTNTGGATTACTAGGGCGTGGCCGTNTGCGGCGGCGGA
JMFF037G06+ CGCTTGGGTNTCCGCGCAAGCGGTNTGGATTNCTAGGGCGTGGCCGTNTGCGGCGGCGGA
JMFF023I19+ CGCTTGGGTNTCCGCGCAAGCGGTNTGGANTAATAGGGCGTGGCCNTCTGCGGCGGCGGA
rJMFF037G06- CGCTTGGGTCTCCGCGCAAGCGGTCTGGATTACTAGGGCGTGGCCGTCTGCGGCGGCGGA
rJMFF023I19- CGCTTGGGTCTCCGCGCAAGCGGTCTGGATTACTAGGGCGTGGCCGTCTGCGGCGGCGGA
                      ____________________________________________________________
consensus CGCTTGGGTCTCCGCGCAAGCGGTCTGGATTACTAGGGCGTGGCCGTCTGCGGCGGCGGA
 
. : . : . : . : . : . :
JMFS012D05+ GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
JMFS126H03+ GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
JMFN006F13+ GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
JMFN009M03+ GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
JMFS117G04+ GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
rJMFF035J08- GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
rJMFF029E19- GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
rJMFF015J10- GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
JMFF035J08+ GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
JMFF037G06+ GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
JMFF023I19+ GAATTGCCGGGGAAGCAAAACGGTGGNGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
rJMFF037G06- GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
rJMFF023I19- GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
                      ____________________________________________________________
consensus GAATTGCCGGGGAAGCAAAACGGTGGTGAATAGGAGGAAGGAGAGGAGAGCGAAAACGGA
 
. : . : . : . : . : . :
JMFS012D05+ AGGCTTCATTTTGG
JMFS126H03+ AGGCTTCATTTTG
JMFN006F13+ AGGCTTCATTTTGGTTGTG
JMFN009M03+ AGGCTTCATTTTGGTTGTGTTT
JMFS117G04+ AGGCTTCATTTTGGTTGTGTTTTT
rJMFF035J08- AGGCTTCATTTTGGTTGTGTTTTTTTTTT
rJMFF029E19- AGGCTTCATTTTGGTTGTGTTTTTTTTTTT
rJMFF015J10- AGGCTTCATTTTGGTTGTGTTTTTTTTTTTTGGAGTC
JMFF035J08+ AGGCTTCATTTTGGTTGTGTTTTTTTTTT
JMFF037G06+ AGGCTTCATTTTGGTTGNGTTTTTTTTTTT
JMFF023I19+ AGGNTTCATTTTGGTTGTGTTTTTTTTTTT
rJMFF037G06- AGGCTTCATTTTGGTTGTGTTTTTTTTTTT
rJMFF023I19- AGGCTTCATTTTGGTTGTGTTTTTTTTTTTTGGAGTCATCGCTGTTCCANACAGCGATGA
                      ____________________________________________________________
consensus AGGCTTCATTTTGGTTGTGTTTTTTTTTTTTGGAGTCATCGCTGTTCCANACAGCGATGA