Contig 011057:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022B02Sequence520011057 (2)emb|CDP04689.1|1e-48unnamed protein product [Coffea canephora]712011057 (2)emb|CDP04689.1|4e-54unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF022B02- ACTCACAGTC
                      ____________________________________________________________
consensus ACTCACAGTC
 
. : . : . : . : . : . :
JMFF022B02- AGAGATAGAGTCTTAAGCTAGCTCAGCCTCTCCTCTCCTCTCCATGGCTTTCTCTTCTTC
                      ____________________________________________________________
consensus AGAGATAGAGTCTTAAGCTAGCTCAGCCTCTCCTCTCCTCTCCATGGCTTTCTCTTCTTC
 
. : . : . : . : . : . :
JMFF022B02- CTTCTCTTCATTCACATCACCATTCCCACGCACTATTAGGAAGAGATGTTCATTTACTCT
rJMFF022B02+ CATTCACATCACCATTCCCACGCACTATTAGGAAGAGATGTTCATTTACTCT
                      ____________________________________________________________
consensus CTTCTCTTCATTCACATCACCATTCCCACGCACTATTAGGAAGAGATGTTCATTTACTCT
 
. : . : . : . : . : . :
JMFF022B02- TAGCCGCAGCAGCAGCAGCATACGCTTCATCGTCAAAGCTGAGGAATCTTCCCAACCACC
rJMFF022B02+ TAGCCGCAGCAGCAGCAGCATACGCTTCATCGTCAAAGCTGAGGAATCTTCCCAACCACC
                      ____________________________________________________________
consensus TAGCCGCAGCAGCAGCAGCATACGCTTCATCGTCAAAGCTGAGGAATCTTCCCAACCACC
 
. : . : . : . : . : . :
JMFF022B02- TCAGACTCCTCAAAATGTTGCTGCTGCAGAGACAAAACCCGAAGCAGCAGCCTCCTCTGA
rJMFF022B02+ TCAGACTCCTCAAAATGTTGCTGCTGCAGAGACAAAACCCGAAGCAGCAGCCTCCTCTGA
                      ____________________________________________________________
consensus TCAGACTCCTCAAAATGTTGCTGCTGCAGAGACAAAACCCGAAGCAGCAGCCTCCTCTGA
 
. : . : . : . : . : . :
JMFF022B02- TGCCCCCCCTCCTCCTCCTCCTAAGCCAAAAAAACCTGTTTATTCCATGAAGAAAGGGCA
rJMFF022B02+ TGCCCCCCCTCCTCNTCCTCNTAAGCCAAAAAAACCTGTTTATTCCATGAAGAAAGGGCA
                      ____________________________________________________________
consensus TGCCCCCCCTCCTCCTCCTCCTAAGCCAAAAAAACCTGTTTATTCCATGAAGAAAGGGCA
 
. : . : . : . : . : . :
JMFF022B02- GATTGTGAGAGTGGATAAAGAGAAGTATCTCAACAGTATCAATTATCTGTCTGTTGGGCA
rJMFF022B02+ GATTGTGAGAGTGGATAAAGAGAAGTATCTCAACAGTATCAATTATCTGTCTGTTGGGCA
                      ____________________________________________________________
consensus GATTGTGAGAGTGGATAAAGAGAAGTATCTCAACAGTATCAATTATCTGTCTGTTGGGCA
 
. : . : . : . : . : . :
JMFF022B02- TCCACCTTACTACAAAGGCCTGGAATACATATATGAAGATCGTGGCGAGGTGCTGGACAT
rJMFF022B02+ TCCACCTTACTACAAAGGCCTGGAATACATATATGAAGATCGTGGCGAGGTGCTGGACAT
                      ____________________________________________________________
consensus TCCACCTTACTACAAAGGCCTGGAATACATATATGAAGATCGTGGCGAGGTGCTGGACAT
 
. : . : . : . : . : . :
JMFF022B02- TCGGATATTCGAGACAGGGGAATATGCACTTATTGGATGGGTTGGAGTACCAACTGCACC
rJMFF022B02+ TCGGATATTCGAGACAGGGGAATATGCACTTATTGGATGGGTTGGAGTACCAACTGCACC
                      ____________________________________________________________
consensus TCGGATATTCGAGACAGGGGAATATGCACTTATTGGATGGGTTGGAGTACCAACTGCACC
 
. : . : . : . : . : . :
JMFF022B02- GGCTTGGCTTCCAACAGAGATTCTCATTAA
rJMFF022B02+ GGCTTGGCTTCCAACAGAGATTCTCATTAAGTCGGACAAGCTCAACTACGAGAGGATTTG
                      ____________________________________________________________
consensus GGCTTGGCTTCCAACAGAGATTCTCATTAAGTCGGACAAGCTCAACTACGAGAGGATTTG
 
. : . : . : . : . : . :
rJMFF022B02+ ATCAAGGTTCCAGAAGGCAAAGCAGGCTGCATCAAGTTATTCATCACAAAATCTTCAAGA
                      ____________________________________________________________
consensus ATCAAGGTTCCAGAAGGCAAAGCAGGCTGCATCAAGTTATTCATCACAAAATCTTCAAGA
 
. : . : . : . : . : . :
rJMFF022B02+ TTGAGAACACTTTATTATATCCATACCCATTACCCAGGCTAGATGAGTCAAAAGAAGCAT
                      ____________________________________________________________
consensus TTGAGAACACTTTATTATATCCATACCCATTACCCAGGCTAGATGAGTCAAAAGAAGCAT
 
. : . : . : . : . : . :
rJMFF022B02+ TTTATGTATTGAGTAAAAAGCAAGGGATGAATGCATTGGATCATAAATGAATTGAAAACA
                      ____________________________________________________________
consensus TTTATGTATTGAGTAAAAAGCAAGGGATGAATGCATTGGATCATAAATGAATTGAAAACA
 
. : . : . : . : . : . :
rJMFF022B02+ ATCAAATTCCTTCTTTCAAGGAGATTGAAACAGAAAACTAGTGTAATTCCAAAGAAGACC
                      ____________________________________________________________
consensus ATCAAATTCCTTCTTTCAAGGAGATTGAAACAGAAAACTAGTGTAATTCCAAAGAAGACC