Contig 011053:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008G09Sequence458001585 (4)ref|XP_009767883.1|2e-41PREDICTED: probable polygalacturonase [Nicotiana sylvestris]450011053 (4)ref|XP_009762711.1|3e-59PREDICTED: probable polygalacturonase isoform X2 [Nicotiana sylvestris]
JMFF021E18Sequence515001585 (4)ref|XP_009599780.1|4e-58PREDICTED: probable polygalacturonase isoform X1 [Nicotiana tomentosiformis]668011053 (4)ref|XP_009762711.1|1e-112PREDICTED: probable polygalacturonase isoform X2 [Nicotiana sylvestris]
JMSF023L09Sequence665001585 (4)ref|XP_009767883.1|4e-43PREDICTED: probable polygalacturonase [Nicotiana sylvestris]800011053 (4)ref|XP_009762711.1|7e-151PREDICTED: probable polygalacturonase isoform X2 [Nicotiana sylvestris]
JMSF036J24Sequence624001585 (4)ref|XP_009767883.1|2e-85PREDICTED: probable polygalacturonase [Nicotiana sylvestris]649011053 (4)ref|XP_009762711.1|2e-114PREDICTED: probable polygalacturonase isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF023L09+ ATCAACCCAGATTTTTGTGCAAATGTGAGGATTGAGGACAACTAC
                      ____________________________________________________________
consensus ATCAACCCAGATTTTTGTGCAAATGTGAGGATTGAGGACAACTAC
 
. : . : . : . : . : . :
rJMSF023L09+ ATAGTATCTGGAGATGACTGTGTGGCAGTTAAAAGCGGTTGGGACGAATACGGTATTAAG
                      ____________________________________________________________
consensus ATAGTATCTGGAGATGACTGTGTGGCAGTTAAAAGCGGTTGGGACGAATACGGTATTAAG
 
. : . : . : . : . : . :
rJMSF023L09+ TACGGCATGCCTACCAAGCAGTTGATCATCCGGCGACTCACCTGCATCTCGCCGTACAGC
rJMSF036J24+ CGTACAGC
rJMFF021E18+ CGTACAGC
                      ____________________________________________________________
consensus TACGGCATGCCTACCAAGCAGTTGATCATCCGGCGACTCACCTGCATCTCGCCGTACAGC
 
. : . : . : . : . : . :
rJMSF023L09+ GCGGCGATAGCGCTGGGGAGTGAAATGTCCGGCGGGATTCAGGACGTTAGAGCCTCAGAT
rJMSF036J24+ GCGGCGATAGCGCTGGGGAGTGAAATGTCCGGCGGGATTCAGGACGTTAGAGCCTCAGAT
rJMFF021E18+ GCGGCGATAGCGCTGGGGAGTGAAATGTCCGGCGGGATTCAGGACGTTAGAGCCTCAGAT
                      ____________________________________________________________
consensus GCGGCGATAGCGCTGGGGAGTGAAATGTCCGGCGGGATTCAGGACGTTAGAGCCTCAGAT
 
. : . : . : . : . : . :
rJMSF023L09+ ATCACGGCCATCAACACGGAGTCCGGCGTGAGGATCAAGACCGCCGTAGGCCGCGGCGGC
rJMSF036J24+ ATCACGGCCATCAACACGGAGTCCGGCGTGAGGATCAAGACCGCCGTAGGCCGCGGCGGC
rJMFF021E18+ ATCACGGCCATCAACACGGAGTCCGGCGTGAGGATCAAGACCGCCGTAGGCCGCGGCGGC
                      ____________________________________________________________
consensus ATCACGGCCATCAACACGGAGTCCGGCGTGAGGATCAAGACCGCCGTAGGCCGCGGCGGC
 
. : . : . : . : . : . :
rJMSF023L09+ TTCGTCAAGGATATATACGTCAAGGGGATGACGCTTCACACCATGAAATGGGTGTTTTGG
rJMSF036J24+ TTCGTCAAGGATATATACGTCAAGGGGATGACGCTTCACACCATGAAATGGGTGTTTTGG
rJMFF021E18+ TTCGTCAAGGATATATACGTCAAGGGGATGACGCTTCACACCATGAAATGGGTGTTTTGG
                      ____________________________________________________________
consensus TTCGTCAAGGATATATACGTCAAGGGGATGACGCTTCACACCATGAAATGGGTGTTTTGG
 
. : . : . : . : . : . :
rJMSF023L09+ ATGACGGGGAACTACGGCTCTCATGCCGACAATAATTACGACCCCAACGCGTTGCCAGAG
rJMSF036J24+ ATGACGGGGAACTACGGCTCTCATGCCGACAATAATTACGACCCCAACGCGTTGCCAGAG
rJMFF008G09+ ATGCCGACAATAATTACGACCCCAACGCGTTGCCAGAG
rJMFF021E18+ ATGACGGGGAACTACGGCTCTCATGCCGACAATAATTACGACCCCAACGCGTTGCCAGAG
                      ____________________________________________________________
consensus ATGACGGGGAACTACGGCTCTCATGCCGACAATAATTACGACCCCAACGCGTTGCCAGAG
 
. : . : . : . : . : . :
rJMSF023L09+ ATCAAAGGGATCAACTACAGAGACGTGGTGGCCGACAACGTGAAGATGGCCGCCCGCCTG
rJMSF036J24+ ATCAAAGGGATCAACTACAGAGACGTGGTGGCCGACAACGTGAAGATGGCCGCCCGCCTG
rJMFF008G09+ ATCAAAGGGATCAACTACAGAGACGTGGTGGCCGACAACGTGAAGATGGCCGCCCGCCTG
rJMFF021E18+ ATCAAAGGGATCAACTACAGAGACGTGGTGGCCGACAACGTGAAGATGGCCGCCCGCCTG
                      ____________________________________________________________
consensus ATCAAAGGGATCAACTACAGAGACGTGGTGGCCGACAACGTGAAGATGGCCGCCCGCCTG
 
. : . : . : . : . : . :
rJMSF023L09+ GAGGGGATTTCCGGCGACCCCTTCACCGGAATCTGCATGTCCAATGTCACCATATCTATG
rJMSF036J24+ GAGGGGATTTCCGGCGACCCCTTCACCGGAATCTGCATGTCCAATGTCACCATATCTATG
rJMFF008G09+ GAGGGGATTTCCGGCGACCCCTTCACCGGAATCTGCATGTCCAATGTCACCATATCTATG
rJMFF021E18+ GAGGGGATTTCCGGCGACCCCTTCACCGGAATCTGCATGTCCAATGTCACCATATCTATG
                      ____________________________________________________________
consensus GAGGGGATTTCCGGCGACCCCTTCACCGGAATCTGCATGTCCAATGTCACCATATCTATG
 
. : . : . : . : . : . :
rJMSF023L09+ GCACAGAAGGCCAAAAAGTATCCATGTACCTGTACTGATATCCAGGGAACTACCAGTGGA
rJMSF036J24+ GCACAGAAGGCCAAAAAGTATCCATGGACCTGTACTGATATCCAGGGAACTACCAGTGGA
rJMFF008G09+ GCACAGAAGGCCAAAAAGTATCCATGGACCTGTACTGATATCCAGGGAACTACCAGTGGA
rJMFF021E18+ GCACAGAAGGCCAAAAAGTATCCATGGACCTGTACTGATATCCAGGGAACTACCAGTGGA
                      ____________________________________________________________
consensus GCACAGAAGGCCAAAAAGTATCCATGGACCTGTACTGATATCCAGGGAACTACCAGTGGA
 
. : . : . : . : . : . :
rJMSF023L09+ GTGGTTCCAAAACCCTGCGAATCACTGCCTGATCAGGGCTCGGAAAAGCCTGAAATGTGT
rJMSF036J24+ GTGGTTCCAAAACCCTGCGAATCACTGCCTGATCAGGGCTCGGAAAAGCCTGAAATGTGT
rJMFF008G09+ GTGGTTCCAAAACCCTGCGAATCACTGCCTGATCAGGGCTCGGAAAAGCCTGAAATGTGT
rJMFF021E18+ GTGGTTCCAAAACCCTGCGAATCACTGCCTGATCAGGGCTCGGAAAAGCCTGAAATGTGT
                      ____________________________________________________________
consensus GTGGTTCCAAAACCCTGCGAATCACTGCCTGATCAGGGCTCGGAAAAGCCTGAAATGTGT
 
. : . : . : . : . : . :
rJMSF023L09+ GATTTTCCGGCAGACAATCTGGAAATTGAAAACATAGAGTTCCAGAAATGTTCTTACAGA
rJMSF036J24+ GATTTTCCGGCAGACAATCTGGAAATTGAAAACATAGAGTTCCAGAAATGTTCTTACAGA
rJMFF008G09+ GATTTTCCGGCAGACAATCTGGAAATTGAAAACATAGAGTTCCAGAAATGTTCTTACAGA
rJMFF021E18+ GATTTTCCGGCAGACAATCTGGAAATTGAAAACATAGAGTTCCAGAAATGTTCTTACAGA
                      ____________________________________________________________
consensus GATTTTCCGGCAGACAATCTGGAAATTGAAAACATAGAGTTCCAGAAATGTTCTTACAGA
 
. : . : . : . : . : . :
rJMSF023L09+ ATATATTATTGATGAGTGATCCATCACCCTCTATGGCCTCTGCTCAGATAATATATGTAT
rJMSF036J24+ ATATATTATTGATGAGTGATCCATCACCCTCTATGGCCTCTGCTCAGATAATATATGTAT
rJMFF008G09+ ATATATTATTGATGAGTGATCCATCACCCTCTATGGCCTCTGCTCAGATAATATATGTAT
rJMFF021E18+ ATATATTATTGATGAGTGATCCATCACCCTCTATGGCCTCTGCTCAGATAATATATGTAT
                      ____________________________________________________________
consensus ATATATTATTGATGAGTGATCCATCACCCTCTATGGCCTCTGCTCAGATAATATATGTAT
 
. : . : . : . : . : . :
rJMSF023L09+ ACATAAGCTGCATAAATGTAATGATGTACCAAACT
rJMSF036J24+ ACATAAGCTGCATAAATGTAATGATGTACCAAACT
rJMFF008G09+ ACATAAGCTGCATAAATGTAATGATGTACCAAACTTCCTACTTTCAGCTATG
rJMFF021E18+ ACATAAGCTGCATAAATGTAATGATGTACCAAACTTCCTACTTTCAGCTATGAATATATA
                      ____________________________________________________________
consensus ACATAAGCTGCATAAATGTAATGATGTACCAAACTTCCTACTTTCAGCTATGAATATATA