Contig 011050:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF045I08+                                                     AACAGTTGTGCGATCAG
                      ____________________________________________________________
consensus                                                        AACAGTTGTGCGATCAG
 
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rJMSF045I08+          TTCAAGATGACCAAAAGGAGCAGGATATAAAAAAATATGGAAGCCGAGGTACAAGCTTTG
                      ____________________________________________________________
consensus             TTCAAGATGACCAAAAGGAGCAGGATATAAAAAAATATGGAAGCCGAGGTACAAGCTTTG
 
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rJMSF045I08+          GAAGAACTCTCAAAGCAGCTTTTCTTGGAAATATATGAGCTTCGCCAAGCTAAGGAAGCT
                      ____________________________________________________________
consensus             GAAGAACTCTCAAAGCAGCTTTTCTTGGAAATATATGAGCTTCGCCAAGCTAAGGAAGCT
 
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rJMSF045I08+          GCTGCTTATTCTCGTACATGGAAAGGTCACCTGCAGAATCTTTTGGGTTATGCTTGTTCT
rJMFF020O03+                                                          TATGCTTGTTCT
                      ____________________________________________________________
consensus             GCTGCTTATTCTCGTACATGGAAAGGTCACCTGCAGAATCTTTTGGGTTATGCTTGTTCT
 
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rJMSF045I08+          GTCTATTGTGTGTATAAAATGATTAAGTCTTTGCAAAGTGTTGTCTTCAAGGAGGATGGT
rJMFF020O03+          GTCTATTGTGNGTATAAAATGATTAAGTCTTTGCAAAGTGTTGTCTTCAAGGAGGATGGT
                      ____________________________________________________________
consensus             GTCTATTGTGTGTATAAAATGATTAAGTCTTTGCAAAGTGTTGTCTTCAAGGAGGATGGT
 
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rJMSF045I08+          T-CTGTAGATCCAGTGACCCGGACAATCAGTATATTTTTGCAATTCTTTGACATAGGAAT
rJMFF020O03+          TCCTGTAGATCCAGTGACCCGGACAATCAGTATATTTTTGCAATTCTTTGACNTAGGAAT
                      ____________________________________________________________
consensus             TCCTGTAGATCCAGTGACCCGGACAATCAGTATATTTTTGCAATTCTTTGACATAGGAAT
 
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rJMSF045I08+          AAATGCCACAATGTTGTCACAGTATATATCCCTCTTATTCATTGGGATGCTGATTGTCAT
rJMFF020O03+          AAATGCCACAATGTTGTCACAGTATATATCCCTCTTATTCATTGGGATGCTGATTGTCAT
                      ____________________________________________________________
consensus             AAATGCCACAATGTTGTCACAGTATATATCCCTCTTATTCATTGGGATGCTGATTGTCAT
 
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rJMSF045I08+          ATCCGTTAGGGGATTCCTAACTAATTTGATGAAGTTCTTCTTTGCAGTTTCCAGAGTTGG
rJMFF020O03+          ATCCGTTAGGGGATTCCTAACTAATTTGATGAAGTTCTTCTTTGCAGTTTCCAGAGTTGG
                      ____________________________________________________________
consensus             ATCCGTTAGGGGATTCCTAACTAATTTGATGAAGTTCTTCTTTGCAGTTTCCAGAGTTGG
 
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rJMSF045I08+          AAGTGGATCATCAAGCAATGTTGTGCTTTTCCTTTCTGAAATCATGGGGATGTATTTTGT
rJMFF020O03+          AAGTGGATCATCAAGCAATGTTGTGCTTTTCCTTTCTGAAATCATGGGGATGTATTTTGT
                      ____________________________________________________________
consensus             AAGTGGATCATCAAGCAATGTTGTGCTTTTCCTTTCTGAAATCATGGGGATGTATTTTGT
 
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rJMSF045I08+          GTCCTCTATTCTGTTGATTAGAAAGAGCCTGGCAACTGAATATCGGATGATCATAACAGA
rJMFF020O03+          GTCCTCTATTCTGTTGATTAGAAAGAGCCTGGCAACTGAATATCGGATGATCATAACAGA
                      ____________________________________________________________
consensus             GTCCTCTATTCTGTTGATTAGAAAGAGCCTGGCAACTGAATATCGGATGATCATAACAGA
 
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rJMSF045I08+          TGTGCTAGGTGGAGATATTCAATTCGACTTCTACCACAGATGGTTTGATGCTATTTTTGT
rJMFF020O03+          TGTGCTAGGTGGAGATATTCAATTCGACTTCTACCACAGATGGTTTGATGCTATTTTTGT
                      ____________________________________________________________
consensus             TGTGCTAGGTGGAGATATTCAATTCGACTTCTACCACAGATGGTTTGATGCTATTTTTGT
 
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rJMSF045I08+          AGCCAGTGCTTTCCTTTCTCTGCTTTTGCTTTCTGCACACTACACATCCCGTCAAGCAGA
rJMFF020O03+          AGCCAGTGCTTTCCTTTCTCTGCTTTTGCTTTCTGCACACTACACATCCCGTCAAGCAGA
                      ____________________________________________________________
consensus             AGCCAGTGCTTTCCTTTCTCTGCTTTTGCTTTCTGCACACTACACATCCCGTCAAGCAGA
 
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rJMSF045I08+          CAAGCACCCAATTGATTAGAGTAGAACATGAACATTGCTGCTGCACCTACTTTATAATAC
rJMFF020O03+          CAAGCACCCAATTGATTAGAGTAGAACATGAACATTGCTGCTGCACCTACTTTATAATAC
                      ____________________________________________________________
consensus             CAAGCACCCAATTGATTAGAGTAGAACATGAACATTGCTGCTGCACCTACTTTATAATAC
 
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rJMSF045I08+          TACTTTGTATAAAGTTCCCCA                                       
rJMFF020O03+          TACTTTGTATAAAGTTCCCCATGATATGATTAATATAGCCATATTTTCATCCCAGGCCAT
                      ____________________________________________________________
consensus             TACTTTGTATAAAGTTCCCCATGATATGATTAATATAGCCATATTTTCATCCCAGGCCAT
 
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rJMFF020O03+          GCGGTTTCTGCCAAACATATGTGGATAAGCTTGCTTACTTGCTTTTGTATGTTGAGTAAA
                      ____________________________________________________________
consensus             GCGGTTTCTGCCAAACATATGTGGATAAGCTTGCTTACTTGCTTTTGTATGTTGAGTAAA