Contig 011045:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF019O17-                               GGCCATTTTCACAAATCATATCTCTCTCCAAAGATCAAAG
JMFF038D19-                                GCCATTTTCACAAATCATATCTCTCTCCAAAGATCAAAG
                      ____________________________________________________________
consensus                                 GGCCATTTTCACAAATCATATCTCTCTCCAAAGATCAAAG
 
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JMFF019O17-           TTTCTATTTCAGGCGAATCTTTGTATTTCAACATGCAGTGGTCAACCCAGATTCTCCAAC
JMFF038D19-           TTTCTATTTCAGGCGAATCTTTGTATTTCAACATGCAGTGGTCAACCCAGATTCTCCAAC
                      ____________________________________________________________
consensus             TTTCTATTTCAGGCGAATCTTTGTATTTCAACATGCAGTGGTCAACCCAGATTCTCCAAC
 
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JMFF019O17-           CGGAACCATTCTCCACCGCCGCCACCAACCGCCCATCACCGCATCCGCCGCTCACCGCCG
JMFF038D19-           CGGAACCATTCTCCACCGCCGCCACCAACCGCCCATCACCGCATCCGCCGCTCACCGCCG
                      ____________________________________________________________
consensus             CGGAACCATTCTCCACCGCCGCCACCAACCGCCCATCACCGCATCCGCCGCTCACCGCCG
 
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JMFF019O17-           CCCAGCAAGAGTTCTCCATCATGGTCTCCGCTCTGCAGAATGTCATCAACGGCGGAGATG
JMFF038D19-           CCCAGCAAGAGTTCTCCATCATGGTCTCCGCTCTGCAGAATGTCATCAACGGCGGAGATG
                      ____________________________________________________________
consensus             CCCAGCAAGAGTTCTCCATCATGGTCTCCGCTCTGCAGAATGTCATCAACGGCGGAGATG
 
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JMFF019O17-           CCGCAGCCGCCGCCACGTCAACCAGCACGCACCAGACTTCTTGCGAAGGATTTGCAGAGC
JMFF038D19-           CCGCAGCCGCCGCCACGTCAACCAGCACGCACCAGACTTCTTGCGAAGGATTTGCAGAGC
                      ____________________________________________________________
consensus             CCGCAGCCGCCGCCACGTCAACCAGCACGCACCAGACTTCTTGCGAAGGATTTGCAGAGC
 
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JMFF019O17-           CGCCGCCGCCGCCGCTGCTAGGGCAGAAGTGTCAGTTCTGCAAATACGAGGGGTGTTTGG
JMFF038D19-           CGCCGCCGCCGCCGCTGCTAGGGCAGAAGTGTCAGTTCTGCAAATACGAGGGGTGTTTGG
                      ____________________________________________________________
consensus             CGCCGCCGCCGCCGCTGCTAGGGCAGAAGTGTCAGTTCTGCAAATACGAGGGGTGTTTGG
 
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JMFF019O17-           GGTGCAACTTCTTTGCGGCGGCGCCGGAAGACGCCCGTCAAATGGCGAAGAAGAAGAAAA
JMFF038D19-           GGTGCAACTTCTTTGCGGCGGCGCCGGAAGACG-CCGTCAAATGGCGAAGAAGAAGAAAA
rJMFF038D19+                                            CCGTCAAATGGCGAAGAAGAAGAAAA
rJMFF019O17+                                            CCGTCAAATGGCGAAGAAGAAGAAAA
                      ____________________________________________________________
consensus             GGTGCAACTTCTTTGCGGCGGCGCCGGAAGACGCCCGTCAAATGGCGAAGAAGAAGAAAA
 
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JMFF019O17-           GCAACGCCGTGGTGATGAAGAGGAAGAAGAAGAATTACAGGGGAGTGAGGCAGAGGCCGT
JMFF038D19-           GCAACGCCGTGGTGATGAAGAGGAAGAAGAAGAATTACAGGGGAGTGAGGCAGAGGCCGT
rJMFF038D19+          GCAACGCCGTGGTGATGAAGAGGAAGAAGAAGAATTACAGGGGAGTGAGGCAGAGGCCGT
rJMFF019O17+          GCAACGCCGTGGTGATGAAGAGGAAGAAGAAGAATTNCAGGGGAGTGAGGCAGAGGCCGT
                      ____________________________________________________________
consensus             GCAACGCCGTGGTGATGAAGAGGAAGAAGAAGAATTACAGGGGAGTGAGGCAGAGGCCGT
 
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JMFF019O17-           GGGGTAAATGGGCGGCGGAG                                        
JMFF038D19-           GGGGTAAATGGGCGGCGGAGATT                                     
rJMFF038D19+          GGGGTAAATGGGCGGCGGAGATTCGAGACCCGAGGAAGGCGGTGCGAGTTTGGCTGGGAA
rJMFF019O17+          GGGGTAAATGGGCGGCGGAGATTCGAGACCCGAGGAAGGCGGTGCGAGTTTGGCTGGGAA
                      ____________________________________________________________
consensus             GGGGTAAATGGGCGGCGGAGATTCGAGACCCGAGGAAGGCGGTGCGAGTTTGGCTGGGAA
 
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rJMFF038D19+          CCTTTAAGACGGCGGAGGAGGCGGCGAGGGCTTACGACAGAGCCGCCATTGAGTTCAGAG
rJMFF019O17+          CCTTTAAGACGGCGGAGGAGGCGGCGAGGGCTTACGACAGAGCCGCCATTGAGTTCAGAG
                      ____________________________________________________________
consensus             CCTTTAAGACGGCGGAGGAGGCGGCGAGGGCTTACGACAGAGCCGCCATTGAGTTCAGAG
 
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rJMFF038D19+          GTCCCAGAGCCAAGCTCAATTTCTCATTTGCCGATTACACCAATACTACTACTTCTACTA
rJMFF019O17+          GTCCCAGAGCCAAGCTCAATTTCTCATTTGCCGATTACACCAATACTACTACTTCTACTA
                      ____________________________________________________________
consensus             GTCCCAGAGCCAAGCTCAATTTCTCATTTGCCGATTACACCAATACTACTACTTCTACTA
 
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rJMFF038D19+          CCATGGCAGTGACGACTTCAAGTACACGTCAGCAAGACGTTACAAATCCTTCTTCATCAT
rJMFF019O17+          CCATGGCAGTGACGACTTCAAGTACACGTCAGCAAGACGTTACAAATCCTTCTTCATCAT
                      ____________________________________________________________
consensus             CCATGGCAGTGACGACTTCAAGTACACGTCAGCAAGACGTTACAAATCCTTCTTCATCAT
 
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rJMFF038D19+          CCACTATCTCCCAACAGCCGCCGCAAGTAGTACAAGAAAACAGTGAAAATGGGACAAATT
rJMFF019O17+          CCACTATCTCCCAACAGCCGCCGCAAGTAGTACAAGAAAACAGTGAAAATGGGACAAATT
                      ____________________________________________________________
consensus             CCACTATCTCCCAACAGCCGCCGCAAGTAGTACAAGAAAACAGTGAAAATGGGACAAATT
 
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rJMFF038D19+          GGTCGGTGCCGGCGAAAATGGAAGTAGGTAACGGAGACCAGGAGTTTCAAGAATGGATGA
rJMFF019O17+          GGTCGGTGCCGGCGAAAATGGAAGTAGGTAACGGAGACCAGGAGTTTCAAGAATGGATGA
                      ____________________________________________________________
consensus             GGTCGGTGCCGGCGAAAATGGAAGTAGGTAACGGAGACCAGGAGTTTCAAGAATGGATGA
 
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rJMFF038D19+          AGATGTTGATGGATTTCAATGACGTCTCTTCCGATTACATTCTTCAACTACCGTAAACTT
rJMFF019O17+          AGATGTTGATGGATTTCAATGACGTCTCTTCCGATTACATTCTTCAACTACCGTAAACTT
                      ____________________________________________________________
consensus             AGATGTTGATGGATTTCAATGACGTCTCTTCCGATTACATTCTTCAACTACCGTAAACTT
 
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rJMFF038D19+          AAACTTAGCCTAGCTAGCCACTTGTTTTTGAATCCATGTTCACTTGATAATTACAAGTTT
rJMFF019O17+          AAACTTAGCCTAGCTAGCCACTTGTTTTTGAATCCATGTTCACTTGATAATTACAAGTTT
                      ____________________________________________________________
consensus             AAACTTAGCCTAGCTAGCCACTTGTTTTTGAATCCATGTTCACTTGATAATTACAAGTTT
 
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rJMFF038D19+          TTAAGTTTGATTTTTTTTAAAAAATGTTTATTGATCTTTTAGATTGATCCAATAAACTAT
rJMFF019O17+          TTAAGTTTGATTTTTTTTAAAAAATGTTTATTGATCTTTTAGATTGATCCAATAAACTAT
                      ____________________________________________________________
consensus             TTAAGTTTGATTTTTTTTAAAAAATGTTTATTGATCTTTTAGATTGATCCAATAAACTAT
 
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rJMFF038D19+          AAACAATGTAACCTAAGCTATTTTGTTTCTTTAATTAGTTTCCGAGCACATTTTTAGATT
rJMFF019O17+          AAACAATGTAACCTAAGCTATTTTGTTTCTTTAANTAGTTTCCGAGCACATTTTTAGATT
                      ____________________________________________________________
consensus             AAACAATGTAACCTAAGCTATTTTGTTTCTTTAATTAGTTTCCGAGCACATTTTTAGATT
 
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rJMFF038D19+          GTGGT                                                       
rJMFF019O17+          GTGGTTGAGAAATTTTTTGTAAATTAAAGTTAAACTATTGTACTAATCACATTCAAGTAA
                      ____________________________________________________________
consensus             GTGGTTGAGAAATTTTTTGTAAATTAAAGTTAAACTATTGTACTAATCACATTCAAGTAA