Contig 011034:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF017K10-                                                      ATGCCAGTTAATAATTA
                      ____________________________________________________________
consensus                                                        ATGCCAGTTAATAATTA
 
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JMFF017K10-           GTAGTTGTGGTTGTTAACTTGTTATGGCATTTTGTGGAACACCTTTGCCTTGATTCGGTG
                      ____________________________________________________________
consensus             GTAGTTGTGGTTGTTAACTTGTTATGGCATTTTGTGGAACACCTTTGCCTTGATTCGGTG
 
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JMFF017K10-           CAGAATTCACTTCCGTTACGTTCTTCTCTCCAATGCTAAAGCTTCCGATTCAATACTGAG
                      ____________________________________________________________
consensus             CAGAATTCACTTCCGTTACGTTCTTCTCTCCAATGCTAAAGCTTCCGATTCAATACTGAG
 
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JMFF017K10-           AACTAGAGCTAATAGCCTCGTCAATGGCGGCAAGGAAGCCTGGTTTGATTGCTCTCTTTG
                      ____________________________________________________________
consensus             AACTAGAGCTAATAGCCTCGTCAATGGCGGCAAGGAAGCCTGGTTTGATTGCTCTCTTTG
 
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JMFF017K10-           ATGTCGATGGTACACTCACTGCACCCCGGAAGGTGGTTACTCCAAAAATGTTAGAGTTCA
rJMFF023P18+                                                                  TTCA
                      ____________________________________________________________
consensus             ATGTCGATGGTACACTCACTGCACCCCGGAAGGTGGTTACTCCAAAAATGTTAGAGTTCA
 
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JMFF017K10-           TGCGGGAGCTGAGAAAGGTGGTCACAGTTGGTGTTGTTGGAGGGTCTGACCTCATTAAGA
rJMFF023P18+          TGCAGGAACTAAGAAAGGTAGTCACAGTTGGTGTTGTTGGAGGTTCAGATCTTGTTAAGA
rJMFF017K10+                                                                TTAAGA
                      ____________________________________________________________
consensus             TGCGGGAGCTGAGAAAGGTGGTCACAGTTGGTGTTGTTGGAGGTTCTGATCTTGTTAAGA
 
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JMFF017K10-           TATCAGAACAGCTTGGGAGTTCTGTTACAAATGATTATGATTATGTTTTCTCTGAGAATG
rJMFF023P18+          TATCGGAACAGCTTGGCAGCTCTGCTATAAATGATTATGATTATGTATTCTCTGAGAATG
rJMFF017K10+          TATCAGANCAGCTTGGGAGTTCTGTTACAAATGATTATGATTATGTTTTCTCTGAGAATG
                      ____________________________________________________________
consensus             TATCAGAACAGCTTGGGAGTTCTGTTACAAATGATTATGATTATGTTTTCTCTGAGAATG
 
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JMFF017K10-           GACTTGTAGCACATCATGATGGGAAGCTAATTGGTACTCAGAGCTTGAAGTCCTTTCTTG
rJMFF023P18+          GACTGGTGGCGCACAAGGATGGGAAGCTAATTGGAACACAGAGCTTGAAGTCTTTTCTTG
rJMFF017K10+          GACTTGTAGCACATCATGATGGGAAGCTAATTGGTACTCAGAGCTTGAAGTCCTTTCTTG
                      ____________________________________________________________
consensus             GACTTGTAGCACATCATGATGGGAAGCTAATTGGTACTCAGAGCTTGAAGTCCTTTCTTG
 
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JMFF017K10-           GAGATGAAAAACTCAAGGAATTCATTAATTTTACTCTCCACTACATTGCGGACCTGGATA
rJMFF023P18+          GGGATGAAAAACTCAAGGAATTCATTAACTTTACTCTCCACTATATTGCTGACTTGGATA
rJMFF017K10+          GAGATGAAAAACTCAAGGAATTCATTAATTTTACTCTCCACTACATTGCGGACCTGGATA
                      ____________________________________________________________
consensus             GAGATGAAAAACTCAAGGAATTCATTAATTTTACTCTCCACTACATTGCGGACCTGGATA
 
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JMFF017K10-           TCCCAATAAAAAGGGGAACATTCATTGAGTTCCGCAGTGGCATGCTTAATGTGTCACCAA
rJMFF023P18+          TCCCAATAAAAAGGGGAACATTCATTGAGTTCCGCAGTGGCATGCTTAATGTGTCACCAA
rJMFF017K10+          TCCCAATAAAAAGGGGAACATTCATTGAGTTCCGCAGTGGCATGCTTAATGTGTCACCAA
                      ____________________________________________________________
consensus             TCCCAATAAAAAGGGGAACATTCATTGAGTTCCGCAGTGGCATGCTTAATGTGTCACCAA
 
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JMFF017K10-           TT                                                          
rJMFF023P18+          TTGGTAGGAATTGTAGCCAGGAAGAGCGAGATGAGTTTGAACAATATGATAAGGTTAACA
rJMFF017K10+          TTGGAAGGAATTGTAGTCAGGAAGAACGAGATGAGTTTGAAAGATATGACAAGGTTCACA
                      ____________________________________________________________
consensus             TTGGTAGGAATTGTAGTCAGGAAGAGCGAGATGAGTTTGAACGATATGATAAGGTTCACA
 
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rJMFF023P18+          AGATCCGTGAACAGATGGTATCAGTCCTTCGAGAAAAATTTGCTCACCTCAACCTCACTT
rJMFF017K10+          AGATACGTGAAAAAATGGTTACAGTGCTTCGTGAAAAATTCGCACACCTTGATCTCACCT
                      ____________________________________________________________
consensus             AGATCCGTGAACAGATGGTTTCAGTGCTTCGTGAAAAATTTGCTCACCTTGATCTCACTT
 
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rJMFF023P18+          TTTCCATCGGGGGCCAAATTAGCTTTGATGTTTTCCCTCGAGGATGGGACAAGACATATT
rJMFF017K10+          TTTCCATTGGTGGCCAGATCAGCTTTGATGTTTTCCCTCGTGGCTGGGATAAGACGTATT
                      ____________________________________________________________
consensus             TTTCCATTGGTGGCCAGATTAGCTTTGATGTTTTCCCTCGTGGCTGGGATAAGACGTATT
 
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rJMFF023P18+          GCTTGAGATACCTTGATGAGTTCAATGAAATCCATTTTTTCGGAGACAAAACATATAAGG
rJMFF017K10+          GCTTGCAATACCTTAATGGTTTTAGTGAAATTCACTTTTTTGGTGACAAAACATACAAGG
                      ____________________________________________________________
consensus             GCTTGCGATACCTTGATGGTTTTAGTGAAATTCATTTTTTTGGTGACAAAACATATAAGG
 
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rJMFF023P18+          GTGGAAATGACTATGAGATTTTTGAATCTGAGAGAACTGTGGGGCACACAGTTACTAGCC
rJMFF017K10+          GAGGAAATGACTTTGAGATTTTCGTGTCTGAGAAAACTGTTGGTCACACAGTGACTAGCC
                      ____________________________________________________________
consensus             GTGGAAATGACTTTGAGATTTTTGTGTCTGAGAGAACTGTTGGTCACACAGTTACTAGCC
 
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rJMFF023P18+          CAGA                                                        
rJMFF017K10+          CAGAAGACACGGCAAAGCAGTGTACAGAGCTGTTCCTATGCTAGGAAAATGGAGGCCTCA
                      ____________________________________________________________
consensus             CAGAAGACACGGCAAAGCAGTGTACAGAGCTGTTCCTATGCTAGGAAAATGGAGGCCTCA
 
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rJMFF017K10+          TGAAATTCTTCAGCAATGCAAGTGATTTGTAATAGGGAGAGAATGCTTGTAGCTGCGTTG
                      ____________________________________________________________
consensus             TGAAATTCTTCAGCAATGCAAGTGATTTGTAATAGGGAGAGAATGCTTGTAGCTGCGTTG
 
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rJMFF017K10+          TATCCTTAAGCAAACTTAATTTACTCTTCATTTTGTCATATTTTCAGTAAGTAAAAAAAC
                      ____________________________________________________________
consensus             TATCCTTAAGCAAACTTAATTTACTCTTCATTTTGTCATATTTTCAGTAAGTAAAAAAAC
 
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rJMFF017K10+          ATTTCATTTTGTAATCGTAAAAAATATTTCGTCTTGTAATCTTCTCAATAAATTAAAAGC
                      ____________________________________________________________
consensus             ATTTCATTTTGTAATCGTAAAAAATATTTCGTCTTGTAATCTTCTCAATAAATTAAAAGC