Contig 011026:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016N20Sequence521000897 (7)ref|XP_009600020.1|7e-44PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor739011026 (8)ref|XP_009793551.1|8e-105PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor
JMFF017I20Sequence580000897 (7)ref|XP_009600020.1|4e-43PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor633011026 (8)ref|XP_009600023.1|4e-75PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor
JMFF043N16Sequence637000897 (7)gb|AHL84161.1|9e-55geranyl pyrophosphate synthase [Nicotiana tabacum]569011026 (8)ref|XP_009600023.1|4e-77PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor
JMFF051M21Sequence645000897 (7)ref|XP_009600020.1|2e-55PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor610011026 (8)ref|XP_009600023.1|7e-76PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor
JMSF022F23Sequence692000897 (7)ref|XP_009600020.1|2e-27PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor758011026 (8)ref|XP_009600021.1|2e-114PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor
JMSF023F20Sequence675022114ref|XP_006364882.1|2e-57PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like [747011026 (8)ref|XP_009600021.1|2e-135PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor
JMSF035I20Sequence675017888ref|XP_009600020.1|2e-60PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor754011026 (8)ref|XP_009793552.1|9e-111PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor
JMSF039K08Sequence673000897 (7)ref|XP_009600020.1|2e-20PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor744011026 (8)ref|XP_009793552.1|3e-102PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isofor

Alignment

This contig is upended


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rJMSF023F20+ TTTCCAGAGCTTGTGTAGCACTAGC
                      ____________________________________________________________
consensus TTTCCAGAGCTTGTGTAGCACTAGC
 
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rJMSF023F20+ CTCTTTGAAGAACACAGAGGTTGTGTCATTGCTAGCAACAGTTGTCGAGCACCTTGTTAC
                      ____________________________________________________________
consensus CTCTTTGAAGAACACAGAGGTTGTGTCATTGCTAGCAACAGTTGTCGAGCACCTTGTTAC
 
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rJMSF023F20+ TGGGGAAACAATGCAAATGACAACTAGTTCTGATCAACGTTGTAGCA-TGGAGTATTATA
rJMSF039K08+ ATGCAAATGACAACTAGTTCTGATCAACGTTGTAGCATTGGAGTATTATA
rJMSF022F23+ CCATGCAAATGACAACTAGTTCTGATCAACGTTGTAGCA-TGGAGTATTATA
rJMSF035I20+ ATGCAAATGACAACTAGNTNTGATCAACGTTGTAGCA-TGGAGTATTATA
rJMFF016N20+ TGTAGCA-TGGAGTATTATA
                      ____________________________________________________________
consensus TGGGGAAACCATGCAAATGACAACTAGTTCTGATCAACGTTGTAGCA-TGGAGTATTATA
 
. : . : . : . : . : . :
rJMSF023F20+ TGCAGAAGACATATTATAAGACTGCATCACTGATTTCAAATAGTTGTAAAGCTATTGCCC
rJMSF039K08+ TGCAGAAGACATATTATAAGACTGCATCACTGATTTCAAATAGTTGTAAAGCTATTGCCC
rJMSF022F23+ TGCAGAAGACATATTATAAGACTGCATCACTGATTTCAAATAGTTGTAAAGCTATTGCCC
rJMSF035I20+ TGCAGAAGACATATTATAAGACTGCATCACTGATTTCAAATAGTTGTAAAGCTATTGCCC
rJMFF016N20+ TGCAGAAGACATATTATAAGACTGCATCACTGATTTCAAATAGTTGTAAAGCTATTGCCC
                      ____________________________________________________________
consensus TGCAGAAGACATATTATAAGACTGCATCACTGATTTCAAATAGTTGTAAAGCTATTGCCC
 
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rJMSF023F20+ TTCTGGCTGGCCAAACTGCAGAAGTTTCTGTGATGGCATTTGAGTACGGAAAAAATCTGG
rJMFF043N16+ GTGATGGCATTTGAGTACGGAAAAAATCTGG
rJMFF051M21+ GTGATGGCATTTGAGTACGGAAAAAATCTGG
rJMSF039K08+ TTCTGGCTGGCCAAACTGCAGAAGTTTCTGTGATGGCATTTGAGTACGGAAAAAATCTGG
rJMSF022F23+ TTCTGGCTGGCCAAACTGCAGAAGTTTCTGTGATGGCATTTGAGTACGGAAAAAATCTGG
rJMSF035I20+ TTCTGGCTGGCCAAACTGCAGAAGTTTCTGTGATGGCATTTGAGTACGGAAAAAATCTGG
rJMFF017I20+ TGTGATGGCATTTGAGTACGGAAAAAATCTGG
rJMFF016N20+ TTCTGGCTGGCCAAACTGCAGAAGTTTCTGTGATGGCATTTGAGTACGGAAAAAATCTGG
                      ____________________________________________________________
consensus TTCTGGCTGGCCAAACTGCAGAAGTTTCTGTGATGGCATTTGAGTACGGAAAAAATCTGG
 
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rJMSF023F20+ GACTGGCTTTTCAATTAATAGATGATGTTCTGGATTTCACTGGCACCTCAGCTACTCTTG
rJMFF043N16+ GACTGGCTTTTCAATTAATAGATGATGTTCTGGATTTCACTGGCACCTCAGCTACTCTTG
rJMFF051M21+ GACTGGCTTTTCAATTAATAGATGATGTTCTGGATTTCACTGGCACCTCAGCTACTCTTG
rJMSF039K08+ GACTGGCTTTTCAATTAATAGATGATGTTCTGGATTTCACTGGCACCTCAGCTACTCTTG
rJMSF022F23+ GACTGGCTTTTCAATTAATAGATGATGTTCTGGATTTCACTGGCACCTCAGCTACTCTTG
rJMSF035I20+ GACTGGCTTTTCAATTAATAGATGATGTTCTGGATTTCACTGGCACCTCAGCTACTCTTG
rJMFF017I20+ GACTGGCTTTTCAATTAATAGATGATGTTGTGGATTTCACTGGCACCTCAGCTACTCTNG
rJMFF016N20+ GACTGGCTTTTCAATTAATAGATGATGTTCTGGATTTCACTGGCACCTCAGCTACTCTTG
                      ____________________________________________________________
consensus GACTGGCTTTTCAATTAATAGATGATGTTCTGGATTTCACTGGCACCTCAGCTACTCTTG
 
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rJMSF023F20+ GGAAGGGATCATTATCTGATATTCGTCATGGAATTGTAACTGCTCCAATATTGTTTGCAA
rJMFF043N16+ GGAAGGGATCATTATCTGATATTCGTCATGGAATTGTAACTGCTCCAATATTGTTTGCAA
rJMFF051M21+ GGAAGGGATCATTATCTGATATTCGTCATGGAATTGTAACTGCTCCAATATTGTTTGCAA
rJMSF039K08+ GGAAGGGATCATTATCTGATATTCGTCATGGAATTGTAACTGCTCCAATATTGTTTGCAA
rJMSF022F23+ GGAAGGGATCATTATCTGATATTCGTCATGGAATTGTAACTGCTCCAATATTGTTTGCAA
rJMSF035I20+ GGAAGGGATCATTATCTGATATTCGTCATGGAATTGTAACTGCTCCAATATTGTTTGCAA
rJMFF017I20+ GGAAGGGATCATTATCTGATATTCGTCATGGAATTGTAACTGCTCCAATATTGTTTGCAA
rJMFF016N20+ GGAAGGGATCATTATCTGATATTCGTCATGGAATTGTAACTGCTCCAATATTGTTTGCAA
                      ____________________________________________________________
consensus GGAAGGGATCATTATCTGATATTCGTCATGGAATTGTAACTGCTCCAATATTGTTTGCAA
 
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rJMSF023F20+ TGGAGGAATACCCTCAGCTGCGTGACGTTGTTGATCAGGGATTTGATGACCCTAGGAACG
rJMFF043N16+ TGGAGGAATACCCTCAGCTGCGTGACGTTGTTGATCAGGGATTTGATGACCCTAGGAACG
rJMFF051M21+ TGGAGGAATACCCTCAGCTGCGTGACGTTGTTGATCAGGGATTTGATGACCCTAGGAACG
rJMSF039K08+ TGGAGGAATACCCTCAGCTGCGTGACGTTGTTGATCAGGGATTTGATGACCCTAGGAACG
rJMSF022F23+ TGGAGGAATACCCTCAGCTGCGTGACGTTGTTGATCAGGGATTTGATGACCCTAGGAACG
rJMSF035I20+ TGGAGGAATACCCTCAGCTGCGTGACGTTGTTGATCAGGGATTTGATGACCCTAGGAACG
rJMFF017I20+ TGGAGGAATACCCTCAGCTGCGTGACGTTGTTGATCAGGGATTTGATGACCCTAGGAACG
rJMFF016N20+ TGGAGGAATACCCTCAGCTGCGTGACGTTGTTGATCAGGGATTTGATGACCCTAGGAACG
                      ____________________________________________________________
consensus TGGAGGAATACCCTCAGCTGCGTGACGTTGTTGATCAGGGATTTGATGACCCTAGGAACG
 
. : . : . : . : . : . :
rJMSF023F20+ TGGATCTTGCACTGGAGTACCTTGGCAAGAGTCGTGGCATACAACGAACGAGAGAGCTGG
rJMFF043N16+ TGGATCTTGCACTGGAGTACCTTGGCAAGAGTCGTGGCATACAACGAACGAGAGAGCTGG
rJMFF051M21+ TGGATCTTGCACTGGAGTACCTTGGCAAGAGTCGTGGCATACAACGAACGAGAGAGCTGG
rJMSF039K08+ TGGATCTTGCACTGGAGTACCTTGGCAAGAGTCGTGGCATACAACGAACGAGAGAGCTGG
rJMSF022F23+ TGGATCTTGCACTGGAGTACCTTGGCAAGAGTCGTGGCATACAACGAACGAGAGAGCTGG
rJMSF035I20+ TGGATCTTGCACTGGAGTACCTTGGCAAGAGTCGTGGCATACAACGAACGAGAGAGCTGG
rJMFF017I20+ TGGATCTTGCACTGGAGTACCTTGGCAAGAGTCGTGGCATACAACGAACGAGAGAGCTGG
rJMFF016N20+ TGGATCTTGCACTGGAGTACCTTGGCAAGAGTCGTGGCATACAACGAACGAGAGAGCTGG
                      ____________________________________________________________
consensus TGGATCTTGCACTGGAGTACCTTGGCAAGAGTCGTGGCATACAACGAACGAGAGAGCTGG
 
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rJMSF023F20+ CAACAAAGCACGCCAACCTGGCATCAGATGCTATCGATTCTCTCCCAGAGAGCGATGACG
rJMFF043N16+ CAACAAAGCACGCCAACCTGGCATCAGATGCTATCGATTCTCTCCCAGAGAGCGATGACG
rJMFF051M21+ CAACAAAGCACGCCAACCTGGCATCAGATGCTATCGATTCTCTCCCAGAGAGCGATGACG
rJMSF039K08+ CAACAAAGCACGCCAACCTGGCATCAGATGCTATCGATTCTCTCCCAGAGAGCGATGACG
rJMSF022F23+ CAACAAAGCACGCCAACCTGGCATCAGATGCTATCGATTCTCTCCCAGAGAGCGATGACG
rJMSF035I20+ CAACAAAGCACGCCAACCTGGCATCAGATGCTATCGATTCTCTCCCAGAGAGCGATGACG
rJMFF017I20+ CAACAAAGCACGCCAACCTGGCATCAGATGCTATCGATTCTCTCCCAGAGAGCGATGNNG
rJMFF016N20+ CAACAAAGCACGCCAACCTGGCATCAGATGCTATCGATTCTCTCCCAGAGAGCGATGACG
                      ____________________________________________________________
consensus CAACAAAGCACGCCAACCTGGCATCAGATGCTATCGATTCTCTCCCAGAGAGCGATGACG
 
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rJMSF023F20+ AAGATGTTCAAAGGTCAAGACGTGCACTAGTAGAACTGACTCAAAGAGTCATCACGAGAA
rJMFF043N16+ AAGATGTTCAAAGGTCAAGACGTGCACTAGTAGAACTGACTCAAAGAGTCATCACGAGAA
rJMFF051M21+ AAGATGTTCAAAGGTCAAGACGTGCACTAGTAGAACTGACTCAAAGAGTCATCGGGAGAA
rJMSF039K08+ AAGATGTTCAAAGGTCAAGACGTGCACTAGTAGAACTGACTCAAAGAGTCATCACGAGAA
rJMSF022F23+ AAGATGTTCAAAGGTCAAGACGTGCACTAGTAGAACTGACTCAAAGAGTCATCACGAGAA
rJMSF035I20+ AAGATGTTCAAAGGTCAAGACGTGCACTAGTAGAACTGACTCAAAGAGTCATCACGAGAA
rJMFF017I20+ AAGATGTTCAAAGGTCAAGACGTGCACTAGTAGAACTGACTCAAAGAGTCATCACGAGAA
rJMFF016N20+ AAGATGTTCAAAGGTCAAGACGTGCACTAGTAGAACTGACTCAAAGAGTCATCACGAGAA
                      ____________________________________________________________
consensus AAGATGTTCAAAGGTCAAGACGTGCACTAGTAGAACTGACTCAAAGAGTCATCACGAGAA
 
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rJMSF023F20+ CGAAATAGACAGGAAAAATCAGGTTCAGGCACGACGCTTTTTATTACTGTATTGCGGATT
rJMFF043N16+ CGAAATAGACAGGAAAAATCAGGTTCAGGCACGACGCTTTTTATTACTGTATTGCGGATT
rJMFF051M21+ CGAAATAGACAGGAAAAATCAGGTTCAGGCACGACGCTTTTTATTACTGTATTGCGGATT
rJMSF039K08+ CGAAATAGACAGGAAAAATCAGGTTCAGGCACGACGCTTTTTATTACTGTATTGCGGATT
rJMSF022F23+ CGAAATAGACAGGAAAAATCAGGTTCAGGCACGACGCTTTTTATTACTGTATTGCGGATT
rJMSF035I20+ CGAAATAGACAGGAAAAATCAGGTTCAGGCACGACGCTTTTTATTACTGTATTGCGGATT
rJMFF017I20+ CGAAATAGACAGGAAAAATCAGGTTCAGGCACGACGCTTTTTATTACTGTATTGCGGATT
rJMFF016N20+ CGAAATAGACAGGAAAAATCAGGTTCAGGCACGACGCTTTTTATTACTGTATTGCGGATT
                      ____________________________________________________________
consensus CGAAATAGACAGGAAAAATCAGGTTCAGGCACGACGCTTTTTATTACTGTATTGCGGATT
 
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rJMSF023F20+ TTGTTTTGTTTCTCCTTTAGTGTTGCTGTAATACAGGGGGGAATTTTTTTTCCCTAAATC
rJMFF043N16+ TTGTTTTGTTTCTCCTTTAGTGTTGCTGTAATACAGGGGGGAATTTTTTTTCCCTAAATC
rJMFF051M21+ GTGTTTTGTTTCTCCTTTAGTGTTGCTGTAATACAGGGGGGAATTTTTTTTCCCTAAATC
rJMSF039K08+ TTGTTTTGTTTCTCCTTTAGTGTTGCTGTAATACAGGGGGGAATTTTTTTTCCCTAAATC
rJMSF022F23+ TTGTTTTGTTTCTCCTTTAGTGTTGCTGTAATACAGGGGGGAATTTTTTTTCCCTAAATC
rJMSF035I20+ TTGTTTTGTTTCTCCTTTAGTGTTGCTGTAATACAGGGGGGAATTTTTTTTCCCTAAATC
rJMFF017I20+ TTGTTTTGTTTCTCCTTTAGTGTTGCTGTAATACAGGGGGGAATTTTTTTTCCCTAAATC
rJMFF016N20+ TTGTTTTGTTTCTCCTTTAGTGTTGCTGTAATACAGGGGGGAATTTTTTTTCCCTAAATC
                      ____________________________________________________________
consensus TTGTTTTGTTTCTCCTTTAGTGTTGCTGTAATACAGGGGGGAATTTTTTTTCCCTAAATC
 
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rJMSF023F20+ ATT
rJMFF043N16+ ATTTGATCATTGTTTCTAACTGTTTCAATTTTGGCATACAATAATTATTTTGATGAAG
rJMFF051M21+ ATTTGATCATTGTTTCTAACTGTTTCAATTTTGGCATACAATAATTATTTTGATGAAGAA
rJMSF039K08+ ATTTGATCATTGTTTCTAACTGTTTCAATTTTGGCATACAATAATTATTTTGATGAAGAA
rJMSF022F23+ ATTTGATCATTGTTTCTAACTGTTTCAATTTTGGCATACAATAATTATTTTGATGAAGAA
rJMSF035I20+ ATTTGATCATTGTTTCTAACTGTTTCAATTTTGGCATACAATAATTATTTTGATGAAGAA
rJMFF017I20+ ATTTGATCATTGTTTCTAACTGTTTCAATTTTGGCATACAATAATTATTTTGATGAAGAA
rJMFF016N20+ ATTTGATCATTGTTTCTAACTGTTTCAATTTTGGCATACAATAATTATTTTGATGAAGAA
                      ____________________________________________________________
consensus ATTTGATCATTGTTTCTAACTGTTTCAATTTTGGCATACAATAATTATTTTGATGAAGAA
 
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rJMFF051M21+ AA
rJMSF039K08+ AATGCCCTGTGCTGTAATGCCAACTTCAT
rJMSF022F23+ AATGCCCTGTGCTGTAATGCCAACTTCATG
rJMSF035I20+ AATGCCCTGTGCTGTAATGCCAACTTCATG
rJMFF017I20+ AATGCCCTGTGCTGTAATGCCAACTTCATGTAAATCATTATCAGAACTTCTATAAGAAT
rJMFF016N20+ AATGCCCTGTGCTGTAATGCCAACTTCATGTAAATCATTACCAGAACTTCTATAAGAATT
                      ____________________________________________________________
consensus AATGCCCTGTGCTGTAATGCCAACTTCATGTAAATCATTATCAGAACTTCTATAAGAATT