Contig 011024:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013J09Sequence584004850 (16)ref|NP_001234657.1|7e-127cutin deficient 2 [Solanum lycopersicum] gb|ACU12849.1| cutin deficient 2 [Solan482011024 (7)
JMFF016J09Sequence586004850 (16)ref|NP_001234657.1|7e-127cutin deficient 2 [Solanum lycopersicum] gb|ACU12849.1| cutin deficient 2 [Solan604011024 (7)ref|XP_006587871.1|4e-18PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like isoform X3 [G
JMFF030B14Sequence452004850 (16)ref|XP_007051914.1|3e-05HD domain class transcription factor isoform 3, partial [Theobroma cacao] gb|EO714011024 (7)ref|XP_003528880.1|7e-51PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like isoform X1 [G
JMFF035I04Sequence534004850 (16)613011024 (7)gb|KEH18947.1|4e-18homeobox leucine zipper protein [Medicago truncatula]
JMSF033M15Sequence654004850 (16)ref|NP_001281015.1|6e-16homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Malus domestica] gb|ADL36721.736011024 (7)ref|XP_003528880.1|9e-51PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like isoform X1 [G
JMSF047H22Sequence656004850 (16)ref|NP_001281015.1|5e-16homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Malus domestica] gb|ADL36721.689011024 (7)emb|CAN61351.1|2e-62hypothetical protein VITISV_023503 [Vitis vinifera]
JMSF048H07Sequence696004850 (16)ref|XP_009782444.1|3e-137PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X2 [Nicoti618011024 (7)gb|KEH18947.1|1e-40homeobox leucine zipper protein [Medicago truncatula]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF047H22+ TCCGGGCCAGTGCAATAAACGCGAA
                      ____________________________________________________________
consensus TCCGGGCCAGTGCAATAAACGCGAA
 
. : . : . : . : . : . :
rJMSF048H07+ ACATGCATAGACGCGGCGGGGTCGCTGGTGGT
rJMSF047H22+ CCAGAGCAGCATGCTGATCCTCCAGGAGACATGCATAGACGCGGCGGGGTCGCTGGTGGT
rJMFF030B14+ ACATGCATAGACGCGGCGGGGTCGCTGGTGGT
rJMFF035I04+ CTGGTGGT
rJMSF033M15+ ACATGCATAGACGCNGCGGGGTCGCTGGTGGT
                      ____________________________________________________________
consensus CCAGAGCAGCATGCTGATCCTCCAGGAGACATGCATAGACGCGGCGGGGTCGCTGGTGGT
 
. : . : . : . : . : . :
rJMSF048H07+ TTACGCCCCGGTGGATATTCCGGCAATGCACGTGGTGATGAACGGNGGAGATTNCGCGTA
rJMSF047H22+ TTACGCCCCGGTGGATATTCCGGCAATGCACGTGGTGATGAACGGTGGAGATTCCGCGTA
rJMFF030B14+ TTACGCCCCGGTGGATATTCCGGCAATGCACGTGGTGATGAACGGTGGAGATTCCGCGTA
rJMFF035I04+ TTNCGCCCCGGTGGATATTCCGGCAATGCNCGTGGTGATGAACGGNGGNGATTCCGNGTA
rJMSF033M15+ TTACGCCCCGGTGGATATTCCGGCAATGCACGTGGTGATGAACGGTGGAGATTCCGCGTA
                      ____________________________________________________________
consensus TTACGCCCCGGTGGATATTCCGGCAATGCACGTGGTGATGAACGGTGGAGATTCCGCGTA
 
. : . : . : . : . : . :
rJMSF048H07+ CGTTGCGCTGCTGCCTTTTGGGTTNGCGATNGTACCTGACGGTCCNGGCTGTCGTGGNGG
rJMSF047H22+ CGTTGCGCTGCTGCCTTCTGGGTTCGCGATCGTACCTGACGGTCCAGGCTGTCGTGGTGG
rJMFF030B14+ CGTTGCGCTGCTGCCTTCTGGGTTCGCGATCGTACCTGACGGTCCAGGCTGTCGTGGTGG
rJMFF035I04+ CGTTGNGCTGNTGCCTTTTGGGTTNGCGATNGTACCTGACGGTCCAGGCTNTNGTGGTGG
rJMSF033M15+ CGTTGCGCTGCTGCCTTCTGGGTTCGCGATCGTACCTGACGGTCCAGGCTGTCGTGGTGG
rJMFF016J09+ TGGTGG
                      ____________________________________________________________
consensus CGTTGCGCTGCTGCCTTCTGGGTTCGCGATCGTACCTGACGGTCCAGGCTGTCGTGGTGG
 
. : . : . : . : . : . :
rJMSF048H07+ GCCCAACGCGGAGAACGGCGGGGTCCCGGANCACANAGGCGGCGGCGGAGGGTCGCTTTT
rJMSF047H22+ GCCCAACGCGGAGAACGGCGGGGTCCCGGAGCACAGAGGCGGCGGCGGAGGGTCGCTTTT
rJMFF030B14+ GCCCAACGCGGAGAACGGCGGGGTCCCGGAGCACAGAGGCGGCGGCGGAGGGTCGCTTTT
rJMFF035I04+ GCCCAACGCGGAGAACGGNGGGGTCCCGGAGCNCANAGGCGGCGGCGGAGGGTNGCTTTT
rJMSF033M15+ GCCCAACGCGGAGAACGGCGGGGTCCCGGAGCACAGAGGCGGCGGCGGAGGGTCGCTTTT
rJMFF016J09+ GCCCAACGCGGAGAACGGCGGGGTCCCGGAGCACAGAGGCGGCGGCGGAGGGTNGCTTTT
                      ____________________________________________________________
consensus GCCCAACGCGGAGAACGGCGGGGTCCCGGAGCACAGAGGCGGCGGCGGAGGGTCGCTTTT
 
. : . : . : . : . : . :
rJMSF048H07+ GACGGNGGCGTTTCAGATNTTGGNGAACAGCCTCCCCNCGGCCAANCTGACGGTGGAATC
rJMSF047H22+ GACGGTGGCGTTTCAGATCTTGGTGAACAGCCTCCCCACGGCCAAGCTGACGGTGGAATC
rJMFF030B14+ GACGGTGGCGTTTCAGATCTTGGTGAACAGCCTCCCCACGGCCAAGCTGACGGTGGAATC
rJMFF035I04+ GACGGNGGNGTTTCAGATTTTGGNGAACANCCTCCCCNCGGCCAANNTGACGGNGGAATC
rJMSF033M15+ GACGGTGGCGTTTCAGATCTTGGTGAACAGCCTCCCCACGGCCAAGCTGACGGTGGAATC
rJMFF013J09+ GGAATC
rJMFF016J09+ GACGGTGGCGTTTCAGATCTTGGTGAACAGCCTCCCCNCGGCCAAGCTGACGGTGGAATC
                      ____________________________________________________________
consensus GACGGTGGCGTTTCAGATCTTGGTGAACAGCCTCCCCACGGCCAAGCTGACGGTGGAATC
 
. : . : . : . : . : . :
rJMSF048H07+ GGNGGAGACGGTCAACAACCTTATATCCTGCNCCGTTCAAAAGATCAAGGCCNCCCTTCN
rJMSF047H22+ GGTGGAGACGGTCAACAACCTTATATCCTGCACCGTTCAAAAGATCAAGGCCGCCCTTCA
rJMFF030B14+ GGTGGAGACGGTCAACAACCTTATATCCTGCACCGTTCAAAAGATCAAGGCCGCCCTTCA
rJMFF035I04+ GGNGGAGACGGTCAACAACCTTATATCCTGCNCCGTTCAAAANATCAAGGCCNCCCTTCN
rJMSF033M15+ GGTGGAGACGGTCAACAACCTTATATCCTGCACCGTTCAAAAGATCAAGGCCGCCCTTCA
rJMFF013J09+ GGTGGAGACGGTCAACANCCTTATATCCTGCNCCGTTCAAAAGATCAAGGCCGCCCTTCN
rJMFF016J09+ GGTGGAGACGGTCAACAACCTTATATCCTGCNCCGTTCAAAAGATCAAGGCCGCCCTTCA
                      ____________________________________________________________
consensus GGTGGAGACGGTCAACAACCTTATATCCTGCACCGTTCAAAAGATCAAGGCCGCCCTTCA
 
. : . : . : . : . : . :
rJMSF048H07+ CTGCGAGANTTGACCGGACCNCGTGATNTTCACGNGGAACCAANGTTTTTTTTTTTTCTT
rJMSF047H22+ CTGCGAGAGTTGACCGGACCACGTGATNTTCACGTGGAACCAATGT--TTTTTTTTTCTT
rJMFF030B14+ CTGCGAGAGTTGACCGGACCACGTGATCTTCACGTGGAACCAATG---TTTTTTTTTCTT
rJMFF035I04+ CTGNGAGAGTTGNCCGGNCCNCGNGATTTTCNCGNGGAACCAANGTTTTTTTTTTTTCTT
rJMSF033M15+ CTGCGAGAGTTGACCGGACCACGTGATCTTCACGTGGAACCAATGT--TTTTTTTTTCTT
rJMFF013J09+ CTGNGAGAGTTGNCCGGNCCNCGTGATTTTCNCGTGGAACCAATGT--TTTTTTTTTCTT
rJMFF016J09+ CTGCGAGAGTTGACCGGACCACGTGATNTTCACGTGGAACCAATGT--TTTTTTTTTCTT
                      ____________________________________________________________
consensus CTGCGAGAGTTGACCGGACCACGTGATTTTCACGTGGAACCAATGT--TTTTTTTTTCTT
 
. : . : . : . : . : . :
rJMSF048H07+ TTTCCTTTTTCTTTTTTCTCATCAGTTTTATTATCTGACTAGGTTGATGTCGTGTGGTAC
rJMSF047H22+ TTTCCTTTTTCTTTTTTCTCATCAGTTTTATTATCTGACTAGGTTGATGTCGTGTGGTAC
rJMFF030B14+ TTTCCTTTTTCTTTTTTCTCATCAGTTTTATTATCTGACTAGGTTGATGTCGTGTGGTAC
rJMFF035I04+ TTTCCTTTTTCTTTTTTCTCATCAGTTTTATTATCTGACTAGGTTGATGTCGTGTGGTAC
rJMSF033M15+ TTTCCTTTTTCTTTTTTCTCATCAGTTTTATTATCTGACTAGGTTGATGTCGTGTGGTAC
rJMFF013J09+ TTTCCTTTTTCTTTTTTCTCATCAGTTTTATTATCTGACTAGGTTGATGTCGTGTGGTAC
rJMFF016J09+ TTTCCTTTTTCTTTTTTCTCATCAGTTTTATTATCTGACTAGGTTGATGTCGTGTGGTAC
                      ____________________________________________________________
consensus TTTCCTTTTTCTTTTTTCTCATCAGTTTTATTATCTGACTAGGTTGATGTCGTGTGGTAC
 
. : . : . : . : . : . :
rJMSF048H07+ TATGTATAATTCTGTTGTAGAGAAACGCGAGTCAAGAACGAACCGCGAAAACAAACCCTT
rJMSF047H22+ TATGTATAATTCTGTTGTAGAGAAACGCGAGTCAAGAACGAACCGCGAAAACAAACCCTT
rJMFF030B14+ TATGTATAATTCTGTTGTAGAGAAACGCGAGTCAAGAACGAACCGCGAAAACAAACCCTT
rJMFF035I04+ TATGTATAATTCTGTTGTAGAGAAACGCGAGTCAAGAACGAACCGCGAAAACAAACCCTT
rJMSF033M15+ TATGTATAATTCTGTTGTAGAGAAACGCGAGTCAAGAACGAACCGCGAAAACAAACCCTT
rJMFF013J09+ TATGTATAATTCTGTTGTAGAGAAACGCGAGTCAAGAACGAACCGCGAAAACAAACCCTT
rJMFF016J09+ TATGTATAATTCTGTTGTAGAGAAACGCGAGTCAAGAACGAACCGCGAAAACAAACCCTT
                      ____________________________________________________________
consensus TATGTATAATTCTGTTGTAGAGAAACGCGAGTCAAGAACGAACCGCGAAAACAAACCCTT
 
. : . : . : . : . : . :
rJMSF048H07+ TGCGCCGTCGCATGGGGTGTCGCCGGCCACCCTGCAAGGCGGTGGTTCGGGGGATAAACG
rJMSF047H22+ TGCGCCGTCGCATGGGGTGTCGCCGGCCACCCTGCAAGGCGGTGGTTCGGGGGATAAACG
rJMFF030B14+ TGCGCCGTCGCATGGGGTGTCGCCGGCCACCCTGCAAGGCGGTGGTTCGGGGGATAAACG
rJMFF035I04+ TGCGCCGTCGCATGGGGTGTCGCCGGCCACCCTGCAAGGCGGTGGTTCGGGGGATAAACG
rJMSF033M15+ TGCGCCGTCGCATGGGGTGTCGCCGGCCACCCTGCAAGGCGGTGGTTCGGGGGATAAACG
rJMFF013J09+ TGCGCCGTCGCATGGGGTGTCGCCGGCCACCCTGCAAGGCGGTGGTTCGGGGGATAAACG
rJMFF016J09+ TGCGCCGTCGCATGGGGTGTCGCCGGCCACCCTGCAAGGCGGTGGTTCGGGGGATAAACG
                      ____________________________________________________________
consensus TGCGCCGTCGCATGGGGTGTCGCCGGCCACCCTGCAAGGCGGTGGTTCGGGGGATAAACG
 
. : . : . : . : . : . :
rJMSF048H07+ CAATCCGAGGGGTGGTGGTTCGGGTATTGACTCGGACATATTGGTG
rJMSF047H22+ CAATCCGAGGGGTGGTGGTTCGGGTATTGACTCGGACATATTGGTGTGGCTGAATTTGAG
rJMFF030B14+ CAATCCGAGGGGTGGTGGTTCGGGTATTGACTCGGACATATTGGTGTGGCTGAATTTGAG
rJMFF035I04+ CAATCCGAGGGGTGGTGGTTCGGGTATTGACTCGGACATATTGGTGTGGCTGAATTTGAG
rJMSF033M15+ CAATCCGAGGGGTGGTGGTTCGGGTATTGACTCGGACATATTGGTGTGGCTGAATTTGAG
rJMFF013J09+ CAATCCGAGGGGTGGTGGTTCGGGTATTGACTCGGACATATTGGTGTGGCTGAATTTGAG
rJMFF016J09+ CAATCCGAGGGGTGGTGGTTCGGGTATTGACTCGGACATATTGGTGTGGCTGAATTTGAG
                      ____________________________________________________________
consensus CAATCCGAGGGGTGGTGGTTCGGGTATTGACTCGGACATATTGGTGTGGCTGAATTTGAG
 
. : . : . : . : . : . :
rJMSF047H22+ TTCATA
rJMFF030B14+ TTCATAATTATATTATTAATTAGGTGTGAATGAATGGTTTTCTTTCATTTTCATTTTCCT
rJMFF035I04+ TTCAT
rJMSF033M15+ TTCATAATTATATTATTAATTAGGTGTGAATGAATGGTTTTCTTTCATTTTCATTTTCCT
rJMFF013J09+ TTCATAATTATATTATTAATTAGGTGTGAATGAATGGTTTTCTTTCATTTTCATTTTCCT
rJMFF016J09+ TTCATAATTATATTATTAATTAGGTGTGAATGAATGGTTTTCTTTCATTTTCATTTTCCT
                      ____________________________________________________________
consensus TTCATAATTATATTATTAATTAGGTGTGAATGAATGGTTTTCTTTCATTTTCATTTTCCT
 
. : . : . : . : . : . :
rJMFF030B14+ TATTAACTTGCTTGTGATGTATT
rJMSF033M15+ TATTAACTTGCTTGTGATGTATT
rJMFF013J09+ TATTAACTTGCTTGTGATGTATTTGAAGTTATGTAATGATTTTTGTTATCATATATAT
rJMFF016J09+ TATTAACTTGCTTGTGATGTATTTGAAGTTATGTAATGATTTTTGTTATCATATATATTA
                      ____________________________________________________________
consensus TATTAACTTGCTTGTGATGTATTTGAAGTTATGTAATGATTTTTGTTATCATATATATTA