Contig 011009:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011P03Sequence589011009 (16)ref|XP_009621764.1|73.9PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]768011009 (16)ref|XP_009621764.1|177PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]
JMFF012O20Sequence511011009 (16)ref|XP_009621764.1|75.1PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]763011009 (16)ref|XP_009621764.1|176PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]
JMFF028H06Sequence521011009 (16)ref|XP_009621764.1|75.5PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]619011009 (16)ref|XP_009621764.1|170PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]
JMFF029A22Sequence601011009 (16)ref|XP_009621764.1|55.5PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]806011009 (16)ref|XP_009621764.1|177PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]
JMSF008H14Sequence404011009 (16)ref|XP_009621764.1|71.2PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]775011009 (16)ref|XP_009621764.1|176PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]
JMSF024I10Sequence675011009 (16)ref|XP_009621764.1|75.9PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]742011009 (16)ref|XP_009621764.1|177PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]
JMSF035A18Sequence689011009 (16)ref|XP_009621764.1|75.9PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]759011009 (16)ref|XP_009621764.1|175PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]
JMSF052B01Sequence676011009 (16)ref|XP_009621764.1|75.9PREDICTED: uncharacterized protein LOC104113341 [Nicotiana tomentosiformis]982011009 (16)ref|XP_006355883.1|203PREDICTED: uncharacterized protein LOC102584432 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF029A22-                                                 GCATTTGATTCAGAATTTTTAA
JMFF012O20-                                                 GCATTTGATTCAGAATTTTTAA
JMFF028H06-                                                 GCATTTGATTCAGAATTTTTAA
JMSF024I10-                                                 GCATTTGATTCAGAATTTTTAA
JMSF052B01-                                                   ATTTGATTCAGAATTTTTAA
JMFF011P03-                                                 GCATTTGATTCAGAATTTTTAA
JMSF008H14-                                                 GCATTTGATTCAGAATTTTTAA
JMSF035A18-                                             GATTGCATTTGATTCAGAATTTTTAA
                      ____________________________________________________________
consensus                                               GATTGCATTTGATTCAGAATTTTTAA
 
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JMFF029A22-           GATCTGGCAAGAAAGATGCTGCTAAGAAGCTCTTCTACTCCGATTCTTGGATCTCTTCTT
JMFF012O20-           GATCTGGCAAGAAAGATGCTGCTAAGAAGCTCTTCTACTCCGATTCTTGGATCTCTTCTT
JMFF028H06-           GATCTGGCAAGAAAGATGCTGCTAAGAAGCTCTTCTACTCCGATTCTTGGATCTCTTCTT
JMSF024I10-           GATCTGGCAAGAAAGATGCTGCTAAGAAGCTCTTCTACTCCGATTCTTGGATCTCTTCTT
JMSF052B01-           GATCTGGCAAGAAAGATGCTGCTAAGAAGCTCTTCTACTCCGATTCTTGGATCTCTTCTT
JMFF011P03-           GATCTGGCAAGAAAGATGCTGCTAAGAAGCTCTTCTACTCCGATTCTTGGATCTCTTCTT
JMSF008H14-           GATCTGGCAAGAAAGATGCTGCTAAGAAGCTCTTCTACTCCGATTCTTGGATCTCTTCTT
JMSF035A18-           GATCTGGCAAGAAAGATGCTGCTAAGAAGCTCTTCTACTCCGATTCTTGGATCTCTTCTT
                      ____________________________________________________________
consensus             GATCTGGCAAGAAAGATGCTGCTAAGAAGCTCTTCTACTCCGATTCTTGGATCTCTTCTT
 
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JMFF029A22-           GCAGATAGTTGTGGGGAAGCTCTTACACCAAACCATCATTTCAAGAAAGTATTGTATCCC
JMFF012O20-           GCAGATAGTTGTGGGGAAGCTCTTACACCAAACCATCATTTCAAGAAAGTATTGTATCCC
JMFF028H06-           GCAGATAGTTGTGGGGAAGCTCTTACACCAAACCATCATTTCAAGAAAGTATTGTATCCC
JMSF024I10-           GCAGATAGTTGTGGGGAAGCTCTTACACCAAACCATCATTTCAAGAAAGTATTGTATCCC
JMSF052B01-           GCAGATAGTTGTGGGGAAGCTCTTACACCAAACCATCATTTCAAGAAAGTATTGTATCCC
JMFF011P03-           GCAGATAGTTGTGGGGAAGCTCTTACACCAAGCCATCATTTCAAGAAAGTATTGTATCCC
JMSF008H14-           GCAGATAGTTGTGGGGAAGCTCTTACACCAAACCATCATTTCAAGAAAGTATTGTATCCC
JMSF035A18-           GCAGATAGTTGTGGGGAAGCTCTTACACCAAACCATCATTTCAAGAAAGTATTGTATCCC
                      ____________________________________________________________
consensus             GCAGATAGTTGTGGGGAAGCTCTTACACCAAACCATCATTTCAAGAAAGTATTGTATCCC
 
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JMFF029A22-           CCCCATGTTGGATCCCTCAACTTCAACAAGTTTTCTTGCAGTTCTTCCTCCCCTAGCTCC
JMFF012O20-           CCCCATGTTGGATCCCTCAACTTCAACAAGTTTTCTTGCAGTTCTTCCTCCCCTAGCTCC
JMFF028H06-           CCCCATGTTGGATCCCTCAACTTCAACAAGTTTTCTTGCAGTTCTTCCTCCCCTAGCTCC
JMSF024I10-           CCCCATGTTGGATCCCTCAACTTCAACAAGTTTTCTTGCAGTTCTTCCTCCCCTAGCTCC
JMSF052B01-           CCCCATGTTGGATCCCTCAACTTCAACAAGTTTTCTTGCAGTTCTTCCTCCCCTAGCTCC
JMFF011P03-           CCCCATGTTGGATCCCTCAACTTCAACAAGTTTTCTTGCAGTTCTTCCTCCCCTAGCTCC
JMSF008H14-           CCCCATGTTGGATCCCTCAACTTCAACAAGTTTTCTTGCAG---TTCCTCCCCTAGCTCC
JMSF035A18-           CCCCATGTTGGATCCCTCAACTTCAACAAGTTTTCTTGCAGTTCTTCCTCCCCTAGCTCC
                      ____________________________________________________________
consensus             CCCCATGTTGGATCCCTCAACTTCAACAAGTTTTCTTGCAGTTCTTCCTCCCCTAGCTCC
 
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JMFF029A22-           CCTTCTGTTTCTGAGTTTTCTTCTGGCAAGCAGTTGTCCAGAAATGGGTTTCGAAAAGTT
JMFF012O20-           CCTTCTGTTTCTGAGTTTTCTTCTGGCAAGCAGTTGTCCAGAAATGGGTTTCGAAAAGTT
JMFF028H06-           CCTTCTGTTTCTGAGTTTTCTTCTGGCAAGCAGTTGTCCAGAAATGGGTTTCGAAAAGTT
JMSF024I10-           CCTTCTGTTTCTGAGTTTTCTTCTGGCAAGCAGTTGTCCAGAAATGGGTTTCGAAAAGTT
JMSF052B01-           CCTTCTGTTTCTGAGTTTTCTTCTGGCAAGCAGTTGTCCAGAAATGGGTTTCGAAAAGTT
JMFF011P03-           CCTTCTGTTTCTGAGTTTTCTTCTGGCAAGCAGTTGTCCAGAAATGGGTTTCGAAAAGTT
JMSF008H14-           CCTTCTGTTTCTGAGTTTTCTTCTGGCAAGCAGTTGTCCAGAAATGGGTTTCGAAAAGTT
JMSF035A18-           CCTTCTGTTTCTGAGTTTTCTTCTGGCAAGCAGTTGTCCAGAAATGGGTTTCGAAAAGTT
rJMSF052B01+                                                       GGGTTTCGAAAAGTT
                      ____________________________________________________________
consensus             CCTTCTGTTTCTGAGTTTTCTTCTGGCAAGCAGTTGTCCAGAAATGGGTTTCGAAAAGTT
 
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JMFF029A22-           ATGTCGGAGGGGAACTTGGAAGGGTTGGCAGTCCATGGACCCGGCAAT-GTGAGGATGAG
JMFF012O20-           ATGTCGGAGGGGAACTTGGAAGGGTTGGCAGTCCATGGACCCGGCAATGGTGAGGATGAG
JMFF028H06-           ATGTCGGAGGGGAACTTGGAAGGGTTGGCAGTCCATGGACCCGGCAATGGTGAGGATGAG
JMSF024I10-           ATGTCGGAGGGGAACTTGGAAGGGTTGGCAGTCCATGGACCCGGCAATGGTGAGGATGAG
JMSF052B01-           ATGTCGGAGGGGAACTTGGAAGGGTTGGCAGTCCATGGACCCGGCAATGGTGAGGATGAG
JMFF011P03-           ATGTCGGAGGGGAACTTGGAAGGGTTGGCAGTCCATGGACCCGGCAATGGTGAGGATGAG
JMSF008H14-           ATGTCGGAGGGGAACTTGGAAGGGTTGGCAGTCCATGGACCCGGCAATGGTGAGGATGAG
JMSF035A18-           ATGTCGGAGGGGAACTTGGAAGGGTTGGCAGTCCATGGACCCGGCAATGGTGAGGATGAG
rJMSF052B01+          ATGTCGGAGGGGAACTTGGAAGGGTTGGCAGTCCATGGACCCGGCAATGGTGAGGATGAG
                      ____________________________________________________________
consensus             ATGTCGGAGGGGAACTTGGAAGGGTTGGCAGTCCATGGACCCGGCAATGGTGAGGATGAG
 
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JMFF029A22-           TTCAGTCTTGCTATCCCACTGAAGAAGTTTCCACGCGTGAATGGGTTGGAAACCATCCCG
JMFF012O20-           TTCAGTCTTGCTATCCCACTGAAGAAGTTTCCACGCGTGAATGGGTTGGAAACCATCCCG
JMFF028H06-           TTCAGTCTTGCTATCCCACTGAAGAAGTTTCCACGCGTGAATGGGTTGGAAACCATCCCG
JMSF024I10-           TTCAGTCTTGCTATCCCACTGAAGAAGTTTCCACGCGTGAATGGGTTGGAAACCATCCCG
JMSF052B01-           TTCAGTCTTGCTATCCCACTGAAGAAGTTTCCACGCGTGAATGGGTTGGAAACCATCCCG
JMFF011P03-           TTCAGTCTTGCTATCCCACTGAAGAAGTTTCCACGCGTGAATGGGTTGGAAACCATCCCG
JMSF008H14-           TTCAGTCTTGCTATCCCACTGAAGAAGTTTCCACGCGTGAATGGGTTGGAAACCATCCCG
JMSF035A18-           TTCAGTCTTGCTATCCCACTGAAGAAGTTTCCACGCGTGAATGGGTTGGAAACCATCCCG
rJMSF052B01+          TTCAGTCTTGCTATCCCACTGAAGAAGTTTCCACGCGTGAATGGGTTGGAAACCATCCCG
                      ____________________________________________________________
consensus             TTCAGTCTTGCTATCCCACTGAAGAAGTTTCCACGCGTGAATGGGTTGGAAACCATCCCG
 
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JMFF029A22-           TCTTTCTCGTTACATGGCTCAGGAAGTTGTGAAGATGAAGAAAGTGAGGAAGATGAGGAA
JMFF012O20-           TCTTTCTCGTTACATGGCTCAGGAAGTTGTGAAGATGAAGAAAGTGAGGAAGATGAGGAA
JMFF028H06-           TCTTTCTCGTTACATGGCTCAGGAAGTTGTGAAGATGAAGAAAGTGAGGAAGATGAGGAA
JMSF024I10-           TCTTTCTCGTTACATGGCTCAGGAAGTTGTGAAGATGAAGAAAGTGAGGAAGATGAGGAA
JMSF052B01-           TCTTTCTCGTTACATGGCTCAGGAAGTTGTGAAGATGAAGAAAGTGAGGAAGATGAGGAA
JMFF011P03-           TCTTTCTCGTTACATGGCTCAGGAAGTTGTGAAGATGAAGAAAGTGAGGAAGATGAGGAA
JMSF008H14-           TCTTTCTCGTTACATGGCTCAGGA                                    
JMSF035A18-           TCTTTCTCGTTACATGGCTCAGGAAGTTGTGAAGATGAAGAAAGTGAGGAAGATGAGGAA
rJMSF008H14+                                          AGATGAAGAAAGTGAGGAAGATGAGGAA
rJMSF052B01+          TCTTTCTCGTTACATGGCTCAGGAAGTTGTGAAGATGAAGAAAGTGAGGAAGATGAGGAA
rJMSF035A18+                                                           AAGATGAGGAA
rJMFF029A22+                                          AGATGAAGAAAGTGAGGAAGATGAGGAA
                      ____________________________________________________________
consensus             TCTTTCTCGTTACATGGCTCAGGAAGTTGTGAAGATGAAGAAAGTGAGGAAGATGAGGAA
 
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JMFF029A22-           TTGGAGGCGGTCATGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
JMFF012O20-           TTGGAGGCGGTCATGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
JMFF028H06-           TTGGAGGCGGTCATGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
JMSF024I10-           TTGGAGGCGGTCATGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
JMSF052B01-           TTGGAGGCGGTCATGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
JMFF011P03-           TTGGAGGCGGTCATGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
JMSF035A18-           TTGGAGGCGGTCATGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
rJMSF008H14+          TTGGAGGCGGTCATGGATGATGGTGNTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
rJMSF052B01+          TTGGAGGCGGTCATGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
rJMFF012O20+                       TGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
rJMSF024I10+                     CATGGATGATGGTGTTAATCAATGCNTGAAAGCAGAAATGAGCCTGAAC
rJMSF035A18+          TTGGAGGCNGTCATGGATGATGGTGTT-ATCAATGCCTGAAAGCAGAAATGAGCCTGAAC
rJMFF029A22+          TTGGAGGCGGTCATGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
rJMFF011P03+                      ATGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
                      ____________________________________________________________
consensus             TTGGAGGCGGTCATGGATGATGGTGTTAATCAATGCTTGAAAGCAGAAATGAGCCTGAAC
 
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JMFF029A22-           TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTTAAT
JMFF012O20-           TCCATGAAG                                                   
JMFF028H06-           TCCATGAAGGTTGCAGAAG                                         
JMSF024I10-           TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTTAAT
JMSF052B01-           TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTTAAT
JMFF011P03-           TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGANGCTATGGTTGTTAAT
JMSF035A18-           TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTCAAT
rJMSF008H14+          TCCATGAAGGNTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTTAAT
rJMSF052B01+          TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTTAAT
rJMFF012O20+          TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTTAAT
rJMSF024I10+          TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTTAAT
rJMSF035A18+          TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTCAAT
rJMFF029A22+          TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTTAAT
rJMFF011P03+          TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTTAAT
                      ____________________________________________________________
consensus             TCCATGAAGGTTGCAGAAGGGAGAGAGATGTGTCTTATCAGAGAGGCTATGGTTGTTAAT
 
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JMFF029A22-           GGTGGCGGTGATGATCCTACCGGA                                    
JMSF024I10-           GGTGGCGGTGATGATCCTACCGGAGGTTGTGGTGCCACCGGTGGTGGCGGTGGTGGCTGT
JMSF052B01-           GGTGGCGGTGATGATCCTACCGGAGGTTGTGGTGCCACCGGTGGTGGCGGTGGTGGCTGT
JMFF011P03-           GGTGGCGGTGATGATCCTACCGGA                                    
JMSF035A18-           GGTGGCGGTGATGATCCTACCGGAGGTTGTGGTGCCACCGGTGGTGGCGGTGGTGGCTGT
rJMSF008H14+          GGTGGCGGTGATGATCCTACCGGAGGTTGTGGTGCCACCGGTGGTGGCGGTGGTGGCTGT
rJMSF052B01+          GGTGGCGGTGATGATCCTACCGGAGGTTGTGGTGCCACCGGTGGTGGCGGTGGTGGCTGT
rJMFF012O20+          GGTGGCGGTGATGATCCTACCGGAGGTTGTGGTGCCACCGGTGGTGGCGGTGGTGGCTGT
rJMSF024I10+          GGTGGCGGTGATGATCCTACCGGAGGTTGTGGTGCCACCGGTGGTGGCGGTGGTGGCTGT
rJMSF035A18+          GGTGGCGGTGATGATCCTACCGGAGGTTGTGGTGCCACCGGTGGTGGCGGTGGTGGCTGT
rJMFF028H06+                                              ACCGGTGGTGGCGGTGGTGGCTGT
rJMFF029A22+          GGTGGCGGTGATGATCCTACCGGAGGTTGTGGTGCCACCGGTGGTGGCGGTGGTGGCTGT
rJMFF011P03+          GGTGGCGGTGATGATCCTACCGGAGGTTGTGGTGCCACCGGTGGTGGCGGTGGTGGCTGT
                      ____________________________________________________________
consensus             GGTGGCGGTGATGATCCTACCGGAGGTTGTGGTGCCACCGGTGGTGGCGGTGGTGGCTGT
 
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JMSF024I10-           AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCA        
JMSF052B01-           AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCAGTA     
JMSF035A18-           AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCAGTATGGAA
rJMSF008H14+          AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCAGTATGGAA
rJMSF052B01+          AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCAGTATGGAA
rJMFF012O20+          AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCAGTATGGAA
rJMSF024I10+          AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCAGTATGGAA
rJMSF035A18+          AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCAGTATGGAA
rJMFF028H06+          AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCAGTATGGAA
rJMFF029A22+          AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCAGTATGGAA
rJMFF011P03+          AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCAGTATGGAA
                      ____________________________________________________________
consensus             AGGCCAGTGGCCTTTGGCAGGGGTGGGGGCGGGGGCGACAACCATGGGCTCAGTATGGAA
 
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JMSF035A18-           GAG                                                         
rJMSF008H14+          GAGTACTTCAAGAAGATGGTGGCGGAAAATCCCAGCAATCCCCTGTTCTTGAGGAACTAT
rJMSF052B01+          GAGTACTTCAAGAAGATGGTGGCGGAAAATCCCAGCAATCCCCTGTTCTTGAGGAACTAT
rJMFF012O20+          GAGTACTTCAAGAAGATGGTGGCGGAAAATCCCAGCAATCCCCTGTTCTTGAGGAACTAT
rJMSF024I10+          GAGTACTTCAAGAAGATGGTGGCGGAAAATCCCAGCAATCCCCTGTTCTTGAGGAACTAT
rJMSF035A18+          GAGTACTTCAAGAAGATGGTGGCGGAAAATCCCAGCAATCCCCTGTTCTTGAGGAACTAT
rJMFF028H06+          GAGTACTTCAAGAAGATGGTGGCGGAAAATCCCAGCAATCCCCTGTTCTTGAGGAACTAT
rJMFF029A22+          GAGTACTTCAAGAAGATGGTGGCGGAAAATCCCAGCAATCCCCTGTTCTTGAGGAACTAT
rJMFF011P03+          GAGTACTTCAAGAAGATGGTGGCGGAAAATCCCAGCAATCCCCTGTTCTTGAGGAACTAT
                      ____________________________________________________________
consensus             GAGTACTTCAAGAAGATGGTGGCGGAAAATCCCAGCAATCCCCTGTTCTTGAGGAACTAT
 
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rJMSF008H14+          GCTCACTTCTTGTATCAGACAAAGGGAGATTCTAAAGGAGCAGAGGAATATTACTCAAGG
rJMSF052B01+          GCTCACTTCTTGTATCAGACAAAGGGAGATTCTAAAGGAGCAGAGGAATATTACTCAAGG
rJMFF012O20+          GCTCACTTCTTGTATCAGACAAAGGGAGATTCTAAAGGAGCAGAGGAATATTACTCAAGG
rJMSF024I10+          GCTCACTTCTTGTATCAGACAAAGGGAGATTCTAAAGGAGCAGAGGAATATTACTCAAGG
rJMSF035A18+          GCTCACTTCTTGTATCAGACAAAGGGAGATTCTAAAGGAGCAGAGGAATATTACTCAAGG
rJMFF028H06+          GCTCACTTCTTGTATCAGACAAAGGGAGATTCTAAAGGAGCAGAGGAATATTACTCAAGG
rJMFF029A22+          GCTCACTTCTTGTATCAGACAAAGGGAGATTCTAAAGGAGCAGAGGAATATTACTCAAGG
rJMFF011P03+          GCTCACTTCTTGTATCAGACAAAGGGAGATTCTAAAGGAGCAGAGGAATATTACTCAAGG
                      ____________________________________________________________
consensus             GCTCACTTCTTGTATCAGACAAAGGGAGATTCTAAAGGAGCAGAGGAATATTACTCAAGG
 
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rJMSF008H14+          GCAATTCTAGCAGATCCAGGAGATGGCGAAGTTCTATCACAGTATGCTAACCTGGTTTGG
rJMSF052B01+          GCAATTCTAGCAGATCCAGGAGATGGCGAAGTTCTATCACAGTATGCTAACCTGGTTTGG
rJMFF012O20+          GCAATTCTAGCAGATCCAGGAGATGGCGAAGTTCTATCACAGTATGCTAACCTGGTTTGG
rJMSF024I10+          GCAATTCTAGCAGATCCAGGAGATGGCGAAGTTCTATCACAGTATGCTAACCTGGTTTGG
rJMSF035A18+          GCAATTCTAGCAGATCCAGGAGATGGCGAAGTTCTATCACAGTATGCTAACCTGGTTTGG
rJMFF028H06+          GCAATTCTAGCAGATCCAGGAGATGGCGAAGTTCTATCACAGTATGCTAACCTGGTTTGG
rJMFF029A22+          GCAATTCTAGCAGATCCAGGAGATGGCGAAGTTCTATCACAGTATGCTAACCTGGTTTGG
rJMFF011P03+          GCAATTCTAGCAGATCCAGGAGATGGCGAAGTTCTATCACAGTATGCTAACCTGGTTTGG
                      ____________________________________________________________
consensus             GCAATTCTAGCAGATCCAGGAGATGGCGAAGTTCTATCACAGTATGCTAACCTGGTTTGG
 
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rJMSF008H14+          GAGCTCCACCGCGATGCTGATAGAGCAACGAGCTACTTTGAACGCGCAGTCCAAGCTGCT
rJMSF052B01+          GAGCTCCACCGCGATGCTGATAGAGCAACGAGCTACTTTGAACGCGCAGTCCAAGCTGCT
rJMFF012O20+          GAGCTCCACCGCGATGCTGATAGAGCAACGAGCTACTTTGAACGCGCAGTCCAAGCTGCT
rJMSF024I10+          GAGCTCCACCGCGATGCTGATAGAGCAACGAGCTACTTTGAACGCGCAGTCCAAGCTGCT
rJMSF035A18+          GAGCTCCACCGCGATGCTGATAGAGCAACGAGCTACTTTGAACGCGCAGTCCAAGCTGCT
rJMFF028H06+          GAGCTCCACCGCGATGCTGATAGAGCAACGAGCTACTTTGAACGCGCAGTCCAAGCTGCT
rJMFF029A22+          GAGCTCCACCGCGATGCTGATAGAGCAACGAGCTACTTTGAACGCGCAGTCCAAGCTGCT
rJMFF011P03+          GAGCTCCACCGCGATGCTGATAGAGCAACGAGCTACTTTGAACGCGCAGTCCAAGCTGCT
                      ____________________________________________________________
consensus             GAGCTCCACCGCGATGCTGATAGAGCAACGAGCTACTTTGAACGCGCAGTCCAAGCTGCT
 
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rJMSF008H14+          GGAGAAGACAGCCATGTTCATGCTGCATATGCAAGGTTTCTCTGGGAAATTGAAGACATT
rJMSF052B01+          GGAGAAGACAGCCATGTTCATGCTGCATATGCAAGGTTTCTCTGGGAAATTGAAGACATT
rJMFF012O20+          GGAGAAGACAGCCATGTTCATGCTGCATATGCAAGGTTTCTCTGGGAAATTGAAGACATT
rJMSF024I10+          GGAGAAGACAGCCATGTTCATGCTGCATATGCAAGGTTTCTCTGGGAAATTGAAGACATT
rJMSF035A18+          GGAGAAGACAGCCATGTTCATGCTGCATATGCAAGGTTTCTCTGGGAAATTGAAGACATT
rJMFF028H06+          GGAGAAGACAGCCATGTTCATGCTGCATATGCAAGGTTTCTCTGGGAAATTGAAGACATT
rJMFF029A22+          GGAGAAGACAGCCATGTTCATGCTGCATATGCAAGGTTTCTCTGGGAAATTGAAGACATT
rJMFF011P03+          GGAGAAGACAGCCATGTTCATGCTGCATATGCAAGGTTTCTCTGGGAAATTGAAGACATT
                      ____________________________________________________________
consensus             GGAGAAGACAGCCATGTTCATGCTGCATATGCAAGGTTTCTCTGGGAAATTGAAGACATT
 
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rJMSF008H14+          GAGGATGAAGAAGATGACGTACCAAATACTGCACATATAAAGGCGGTTCCCCATCCAGGA
rJMSF052B01+          GAGGATGAAGAAGATGACGTACCAAATACTGCACATATAAAGGCGGTTCCCCATCCAGGA
rJMFF012O20+          GAGGATGAAGAAGATGACGTACCAAATACTGCACATATAAAGGCGGTTCCCCATCCAGGA
rJMSF024I10+          GAGGATGAAGAAGATGACGTACCAAATACTGCACATATAAAGGCGGTTCCCCATCCAGGA
rJMSF035A18+          GAGGATGAAGAAGATGACGTACCAAATACTGCACATATAAAGGCGGTTCCCCATCCAGGA
rJMFF028H06+          GAGGATGAAGAAGATGACGTACCAAATACTGCACATATAAAGGCGGTTCCCCATCCAGGA
rJMFF029A22+          GAGGATGAAGAAGATGACGTACCAAATACTGCACATATAAAGGCGGTTCCCCATCCAGGA
rJMFF011P03+          GAGGATGAAGAAGATGACGTACCAAATACTGCACATATAAAGGCGGTTCCCCATCCAGGA
                      ____________________________________________________________
consensus             GAGGATGAAGAAGATGACGTACCAAATACTGCACATATAAAGGCGGTTCCCCATCCAGGA
 
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rJMSF008H14+          GCAATGGCCTCTGCAACTGCTCACTGAATTGAATCGTAT-CCCTGTAGTTTTAGGTAGCA
rJMSF052B01+          GCAATGGCCTCTGCAACTGCTCACTGAATTGAATCGTAT-CCCTGTAGTTTTAGGTAGCA
rJMFF012O20+          GCAATGGCCTCTGCAACTGCTCACTGAATTGAATCGTAT-CCCTGTAGTTTTAGGTAGCA
rJMSF024I10+          GCAATGGCCTCTGCAACTGCTCACTGAATTGAATCGTAT-CCCTGTAGTTTTAGGTAGCA
rJMSF035A18+          GCAATGGCCTCTGCAACTGCTCACTGAATTGAATCGTAT-CCCTGTAGTTTTAGGTAGCA
rJMFF028H06+          GCAATGGCCTCTGCAACTGCTCACTGAATTGAATCGTAT-CCCTGTAGTTTTAGGTAGCA
rJMFF029A22+          GCAATGGCCTCTGCAACTGCTCACTGAATTGAATCGTAT-CCCTGTAGTTTTAGGTAGCA
rJMFF011P03+          GCAATGGCCTCTGCAACTGCTCACTGAATTGAATCGTATNCCCTGTAGTTTTAGGTAGCA
                      ____________________________________________________________
consensus             GCAATGGCCTCTGCAACTGCTCACTGAATTGAATCGTAT-CCCTGTAGTTTTAGGTAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008H14+          GTAATAATAGATATGACAGATGAAATTCTTTTCAGTTCTAAGAAGCTTAACGGGAGAGAG
rJMSF052B01+          GTAATAATAGATATGACAGATGAAATTCTTTTCAGTTCTAAGAAGCTTAACGGGAGAGAG
rJMFF012O20+          GTAATAATAGATATGACAGATGAAATTCTTTTCAGTTCTAAGAAGCTTAACGGGAGAGAG
rJMSF024I10+          GTAATAATAGATATGACAGATGAAATTCTTTTCAGTTCTAAGAAGCTTAACGGGAGAGAG
rJMSF035A18+          GTAATAATAGATATGACAGATGAAATTCTTTTCAGTTCTAAGAAGCTTAA          
rJMFF028H06+          GTAATAATAGATATGACAGATGAAATTCTTTTCAGTTCTAAGAAGCTTAACGGGAGAGAG
rJMFF029A22+          GTAATAATAGATATGACAGATGAAATTCTTTTCAGTTCTAAGAAGCTTAACGGGAGAGAG
rJMFF011P03+          GTAATAATAGATATGACAGATGAAATTCTTTTCAGTTCTAAGAAGCTTAACGGGAGAGAG
                      ____________________________________________________________
consensus             GTAATAATAGATATGACAGATGAAATTCTTTTCAGTTCTAAGAAGCTTAACGGGAGAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF008H14+          TGAGTGCAATGATGAACTCAACTCGA                                  
rJMSF052B01+          TGAGTGCAATGATGAACTCAACTCGACTAAGCTGTATTCCTGATA               
rJMFF012O20+          TGAGTGCAATGATGAACTCAACTCGACTAAGCTGTATTCCTGATAATGATTC        
rJMSF024I10+          TGAGTGCAATGATGAACTCAAC                                      
rJMFF028H06+          TGAGTGCAATGATGAACTCAACTCGACTAAGCTGTATTCCTGATAATGATTC        
rJMFF029A22+          TGAGTGCAATGATGAACTCAACTCGACTAAGCTGTATTCCTGATAATGATTC        
rJMFF011P03+          TGAGTGCAATGATGAACTCAACTCGACTAAGCTGTATTCCTGATAATGATTCAGAGTATA
                      ____________________________________________________________
consensus             TGAGTGCAATGATGAACTCAACTCGACTAAGCTGTATTCCTGATAATGATTCAGAGTATA