Contig 011006:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011M11Sequence528006000 (2)ref|XP_004229727.1|3e-61PREDICTED: trihelix transcription factor ASIL2 [Solanum lycopersicum]669011006 (2)ref|XP_006354664.1|101PREDICTED: uncharacterized protein LOC102594353 [Solanum tuberosum]
JMFF029M21Sequence518006000 (2)ref|XP_009592908.1|205PREDICTED: uncharacterized protein LOC104089669 [Nicotiana tomentosiformis]658011006 (2)ref|XP_006354664.1|101PREDICTED: uncharacterized protein LOC102594353 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF029M21+ AACACTAGTT
rJMFF011M11+ ACACTAGTT
                      ____________________________________________________________
consensus AACACTAGTT
 
. : . : . : . : . : . :
rJMFF029M21+ ATGGGTCCAATAGGATGTTAAAAGGAGATTGTTTTGGGAAGAAGTCTGCTGATTTGGGGA
rJMFF011M11+ ATGGGTCCAATAGGATGTTAAAAGGAGATTGTTTTGGGAAGAAGTCTGCTGATTTGGGGA
                      ____________________________________________________________
consensus ATGGGTCCAATAGGATGTTAAAAGGAGATTGTTTTGGGAAGAAGTCTGCTGATTTGGGGA
 
. : . : . : . : . : . :
rJMFF029M21+ AAAGGGTTAGTGGGGAAGAAGAGGTGGGGGAGAAGAGGAAGGCAGACCCAATTGCTGAGA
rJMFF011M11+ AAAGGGTTAGTGGGGAAGAAGAGGTGGGGGAGAAGAGGAAGGCAGACCCAATTGCTGAGA
                      ____________________________________________________________
consensus AAAGGGTTAGTGGGGAAGAAGAGGTGGGGGAGAAGAGGAAGGCAGACCCAATTGCTGAGA
 
. : . : . : . : . : . :
rJMFF029M21+ TGGTGACAGCAATTAAGGCATTGGGAGATGGGTTTCTGAAGATGGAGCGGATGAAAATGG
rJMFF011M11+ TGGTGACAGCAATTAAGGCATTGGGAGATGGGTTTCTGAAGATGGAGCGGATGAAAATGG
                      ____________________________________________________________
consensus TGGTGACAGCAATTAAGGCATTGGGAGATGGGTTTCTGAAGATGGAGCGGATGAAAATGG
 
. : . : . : . : . : . :
rJMFF029M21+ AATTGGCTCGGGAATTAGAAGAAATGAAGATGGAAATGGAAATGAAAAGGACTGAGATGA
rJMFF011M11+ AATTGGCTCGGGAATTAGAAGAAATGAAGATGGAAATGGAAATGAAAAGGACTGAGATGA
                      ____________________________________________________________
consensus AATTGGCTCGGGAATTAGAAGAAATGAAGATGGAAATGGAAATGAAAAGGACTGAGATGA
 
. : . : . : . : . : . :
rJMFF029M21+ TTCTTGAATCGCAACAGAGGATTGTGGAAGCTTTTGCCAATGCTCTCTCTGAGAAGAATA
rJMFF011M11+ TTCTTGAATCGCAACAGAGGATTGTGGAAGCTTTTGCCAATGCTCTCTCTGAGAAGAATA
                      ____________________________________________________________
consensus TTCTTGAATCGCAACAGAGGATTGTGGAAGCTTTTGCCAATGCTCTCTCTGAGAAGAATA
 
. : . : . : . : . : . :
rJMFF029M21+ ATAGTAATAAGAAGGCCAAGAGGATGCCTACCCCGGAATGTCAGATGCCTCATAGTTGAT
rJMFF011M11+ ATAGTAATAAGAAGGCCAAGAGGATGCCTACCCCGGAATGTCAGATGCCTCATAGTTGAT
                      ____________________________________________________________
consensus ATAGTAATAAGAAGGCCAAGAGGATGCCTACCCCGGAATGTCAGATGCCTCATAGTTGAT
 
. : . : . : . : . : . :
rJMFF029M21+ TGTCCTTGGTTAAATGCATAAGTTTAGGTGTTGGTTGATCCATCACCCATCTGGAGATGG
rJMFF011M11+ TGTCCTTGGTTAAATGCATAAGTTTAGGTGTTGGTTGATCCATCACCCATCTGGAGATGG
                      ____________________________________________________________
consensus TGTCCTTGGTTAAATGCATAAGTTTAGGTGTTGGTTGATCCATCACCCATCTGGAGATGG
 
. : . : . : . : . : . :
rJMFF029M21+ GTTATTTTTGACATTTCTGAAACAAGGGAATCGTGATGTATTGGAACTCTGGTGCACTTC
rJMFF011M11+ GTTATTTTTGACATTTCTGAAACAAGGGAATCGTGATGTATTGGAACTCTGGTGCACTTC
                      ____________________________________________________________
consensus GTTATTTTTGACATTTCTGAAACAAGGGAATCGTGATGTATTGGAACTCTGGTGCACTTC
 
. : . : . : . : . : . :
rJMFF029M21+ TGGTGTGCCTAAGTTTACAACTTATTTTCACACATGAATAGAGATTGGAATTTGTCAACT
rJMFF011M11+ TGGTGTGCCTAAGTTTACAACTTATTTTCACACATGAATAGAGATTGGAATTTGTCAACT
                      ____________________________________________________________
consensus TGGTGTGCCTAAGTTTACAACTTATTTTCACACATGAATAGAGATTGGAATTTGTCAACT
 
. : . : . : . : . : . :
rJMFF029M21+ TTAAACTTAAGTTAGTTCTGTAGCTGAGTAGCTTGTTTATGTACTCATGTAAGCCTGCTC
rJMFF011M11+ TTAAACTTAAGTTAGTTCTGTAGCTGAGTAGCTTGTTTATGTACTCATGTAAGCCTGCTC
                      ____________________________________________________________
consensus TTAAACTTAAGTTAGTTCTGTAGCTGAGTAGCTTGTTTATGTACTCATGTAAGCCTGCTC
 
. : . : . : . : . : . :
rJMFF029M21+ AAGAAATTGCACTTATGTGCTGCTGCAATGTAGTTGTGTACTTAATAT
rJMFF011M11+ AAGAAATTGCACTTATGTGCTGCTGCAATGTAGTTGTGTACTTAATATTATCTCATCAAT
                      ____________________________________________________________
consensus AAGAAATTGCACTTATGTGCTGCTGCAATGTAGTTGTGTACTTAATATTATCTCATCAAT