Contig 011002:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011I16Sequence588011002 (2)ref|XP_011086669.1|5e-80PREDICTED: high-affinity nitrate transporter 3.1-like [Sesamum indicum]710011002 (2)ref|XP_011086669.1|1e-68PREDICTED: high-affinity nitrate transporter 3.1-like [Sesamum indicum]

Alignment

This contig is upended


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JMFF011I16-           ACCAAGCAATGGAATCTCATCTTAATTCCAAAACATTATTTCTTGTGCTTTTCTTCTTAA
                      ____________________________________________________________
consensus             ACCAAGCAATGGAATCTCATCTTAATTCCAAAACATTATTTCTTGTGCTTTTCTTCTTAA
 
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JMFF011I16-           CCTTTGCACAAACTTGCTATGGAGCAGTTCTCTTCTCTTCCCTTCCACAAACTCTGCTTG
                      ____________________________________________________________
consensus             CCTTTGCACAAACTTGCTATGGAGCAGTTCTCTTCTCTTCCCTTCCACAAACTCTGCTTG
 
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JMFF011I16-           TCTCTGCTTCTCCTAAAGAAGGCCAAGTTGTAAAAGCTGGAGAAGACAGCATAAGTATGA
rJMFF011I16+                    TCCTAAAGAAGGCCAAGTTGTAAAAGCTGGAGAAGACAGCATAAGTATGA
                      ____________________________________________________________
consensus             TCTCTGCTTCTCCTAAAGAAGGCCAAGTTGTAAAAGCTGGAGAAGACAGCATAAGTATGA
 
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JMFF011I16-           GCTGGGGACTGAACCAGAGCTATGAAAGAGGGGTAGATGAGTCATATAAGACCACAAAGG
rJMFF011I16+          GCTGGGGACTGAACCAGAGCTATGAAAGAGGGGTAGATGAGTCATATAAGACCACAAAGG
                      ____________________________________________________________
consensus             GCTGGGGACTGAACCAGAGCTATGAAAGAGGGGTAGATGAGTCATATAAGACCACAAAGG
 
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JMFF011I16-           TGAAACTATGCTATGCCCCAGAAAGCCAGGCAGACCGAGGATGGAGGAAAACTGTGGATG
rJMFF011I16+          TGAAACTATGCTATGCCCCAGAAAGCCAGGCAGACCGAGGATGGAGGAAAACTGTGGATG
                      ____________________________________________________________
consensus             TGAAACTATGCTATGCCCCAGAAAGCCAGGCAGACCGAGGATGGAGGAAAACTGTGGATG
 
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JMFF011I16-           ACCTTAGCAAGGACAAAACATGCCAATTTAGCATAGTTGAAAGGCCTTACTACAGTAGTG
rJMFF011I16+          ACCTTAGCAAGGACAAAACATGCCAATTTAGCATAGTTGAAAGGCCTTACTACAGTAGTG
                      ____________________________________________________________
consensus             ACCTTAGCAAGGACAAAACATGCCAATTTAGCATAGTTGAAAGGCCTTACTACAGTAGTG
 
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JMFF011I16-           AAAAAAACCAAAGTTTTGAATGGATGATAGAGACTGATGTTCCCACAGCCTTGTATTTCG
rJMFF011I16+          AAAAAAACCAAAGTTTTGAATGGATGATAGAGACTGATGTTCCCACAGCCTTGTATTTCG
                      ____________________________________________________________
consensus             AAAAAAACCAAAGTTTTGAATGGATGATAGAGACTGATGTTCCCACAGCCTTGTATTTCG
 
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JMFF011I16-           TTAGAGCTTATGCATATGATTCGGCTGGTAATGAGGTGGCTTATGGTCACACCATTGCTC
rJMFF011I16+          TTAGAGCTTATGCATATGATTCGGCTGGTAATGAGGTGGCTTATGGTCACACCATTGCTC
                      ____________________________________________________________
consensus             TTAGAGCTTATGCATATGATTCGGCTGGTAATGAGGTGGCTTATGGTCACACCATTGCTC
 
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JMFF011I16-           TCTTCAAGGTTCAAGCAACCAGTGGCCGCCATTTGTCTCTTGACATTGCTGCGGCTTGCT
rJMFF011I16+          TCTTCAAGGTTCAAGCAACCAGTGGCCGCCATTTGTCTCTTGACATTGCTGCGGCTTGCT
                      ____________________________________________________________
consensus             TCTTCAAGGTTCAAGCAACCAGTGGCCGCCATTTGTCTCTTGACATTGCTGCGGCTTGCT
 
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JMFF011I16-           TCTCTGGCTTCGCTTTGGTGTCTGTCTTTGGGTTCTTCTTTGCAGAAA            
rJMFF011I16+          TCTCTGGCTTCGCTTTGGTGTCTGTCTTTGGGTTCTTCTTTGCAGAAAAAAGGGGTAGAA
                      ____________________________________________________________
consensus             TCTCTGGCTTCGCTTTGGTGTCTGTCTTTGGGTTCTTCTTTGCAGAAAAAAGGGGTAGAA
 
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rJMFF011I16+          GGCTTATGGCTGCAAACAATTGATGAGAGGATAACGCAACTCTCCTCACTGATTAGAAAG
                      ____________________________________________________________
consensus             GGCTTATGGCTGCAAACAATTGATGAGAGGATAACGCAACTCTCCTCACTGATTAGAAAG
 
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rJMFF011I16+          GAGAAATTGTGGAGAAAATTTTAATAATAAGGTCAAAGTTCAAATATTGTTTACAAAGAA
                      ____________________________________________________________
consensus             GAGAAATTGTGGAGAAAATTTTAATAATAAGGTCAAAGTTCAAATATTGTTTACAAAGAA
 
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rJMFF011I16+          TAGAATTGTTCCCCGTATGAGGGGTTCCATTGGAGATAGTATAAACTATATAGTAGTTTG
                      ____________________________________________________________
consensus             TAGAATTGTTCCCCGTATGAGGGGTTCCATTGGAGATAGTATAAACTATATAGTAGTTTG
 
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rJMFF011I16+          GGGGTGTCTCCTCCGCTCTAGATGTAAAAAAAATAAAAAATAAAAAATAAAAAATTAGAA
                      ____________________________________________________________
consensus             GGGGTGTCTCCTCCGCTCTAGATGTAAAAAAAATAAAAAATAAAAAATAAAAAATTAGAA