Contig 010985:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008D19Sequence397001697 (5)gb|AFQ23178.1|1e-37HSPRO [Nicotiana attenuata]642010985 (4)ref|XP_009613712.1|2e-80PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]
JMFF021K09Sequence427001697 (5)gb|AFQ23178.1|5e-46HSPRO [Nicotiana attenuata]661010985 (4)ref|XP_009613712.1|1e-100PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]
JMFF024B22Sequence490001697 (5)gb|AFQ23178.1|2e-85HSPRO [Nicotiana attenuata]797010985 (4)ref|XP_009613712.1|1e-89PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]
JMFF027F18Sequence493001697 (5)gb|AFQ23178.1|5e-58HSPRO [Nicotiana attenuata]734010985 (4)ref|XP_009613712.1|7e-117PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF027F18+ GGATCTACGCATCAAAGTCGCTTCTAAAT
rJMFF024B22+ CCACGCTGCAGGTACTGGAAACGTGGATCTACGCATCAAAGTCGCTTCTAAAT
                      ____________________________________________________________
consensus CCACGCTGCAGGTACTGGAAACGTGGATCTACGCATCAAAGTCGCTTCTAAAT
 
. : . : . : . : . : . :
rJMFF021K09+ GCCGNAAGCGATNGTTGGATT
rJMFF027F18+ CGGATCTCAGAGAGGATTGATCGAAAGGAATTCGAAAAAGCCGGAAGCGATTGTTGGATT
rJMFF024B22+ CGGATCTCAGAGAGGATTGATCGAAAGGAATTCGAAAAAGCCGGAAGCGATTGTTGGATT
                      ____________________________________________________________
consensus CGGATCTCAGAGAGGATTGATCGAAAGGAATTCGAAAAAGCCGGAAGCGATTGTTGGATT
 
. : . : . : . : . : . :
rJMFF021K09+ CTAGAGAAGACGTGGAAACTCTTAACCGAAATACAAGACCTCCACNTG-CTAATGGATCC
rJMFF027F18+ CTAGAGAAGACGTGGAAACTCTTAACCGAAATACAAGACCTCCACCTG-CTAATGGATCC
rJMFF024B22+ CTAGAGAAGACGTGGAAACTCTTAACCGAAATACAAGACCTCCACCTGNCTAATGGATCC
                      ____________________________________________________________
consensus CTAGAGAAGACGTGGAAACTCTTAACCGAAATACAAGACCTCCACCTG-CTAATGGATCC
 
. : . : . : . : . : . :
rJMFF021K09+ CGACGATTTCCTCCGTCT-AAAAAATCAGTTATCCGTGAAAGCCGTCGCCGAATCGGAGC
rJMFF027F18+ CGACGATTTCCTCCGTCT-AAAAAATCAGTTATCCGTGAAAGCCGTCGCCGAATCGGAGC
rJMFF024B22+ CGACGATTTCCTCCGTCTAAAAAAATCAGTTATCCGTGAAAGCCGTCGCCGAATCGGAGC
rJMFF008D19+ AAAAAATCAGTTATCCGTGAAAGCCGTCGCCGAATCGGAGC
                      ____________________________________________________________
consensus CGACGATTTCCTCCGTCT-AAAAAATCAGTTATCCGTGAAAGCCGTCGCCGAATCGGAGC
 
. : . : . : . : . : . :
rJMFF021K09+ TCTTCTGCTTCCGATCCAGAGAACTGGNGGAGATCACGAAGCTCTCGAAGAGCCTGCGGC
rJMFF027F18+ TCTTCTGCTTCCGATCCAGAGAACTGGTGGAGATCACGAAGCTCTCGAAGAGCCTGCGGC
rJMFF024B22+ TCTTCTGCTTCCGATCCAGAGAACTGGTGGAGATCACGAAGCTCTCGAAGAGCCTGCGGC
rJMFF008D19+ TCTTCTGCTTCCGATCCAGAGAACTGGTGGAGATCACGAAGCTCTCGAAGAGCCTGCGGC
                      ____________________________________________________________
consensus TCTTCTGCTTCCGATCCAGAGAACTGGTGGAGATCACGAAGCTCTCGAAGAGCCTGCGGC
 
. : . : . : . : . : . :
rJMFF021K09+ ACAAAGTCCCCTGTATTCTCGACGTAGAAGTCGATCCTCACGGCGGACCGAGGATCCAGG
rJMFF027F18+ ACAAAGTCCCCTGTATTCTCGACGTAGAAGTCGATCCTCACGGCGGACCGAGGATCCAGG
rJMFF024B22+ ACAAAGTCCCCTGTATTCTCGACGTAGAAGTCGATCCTCACGGCGGACCGAGGATCCAGG
rJMFF008D19+ ACAAAGTCCCCTGTATTCTCGACGTAGAAGTCGATCCTCACGGCGGACCGAGGATCCAGG
                      ____________________________________________________________
consensus ACAAAGTCCCCTGTATTCTCGACGTAGAAGTCGATCCTCACGGCGGACCGAGGATCCAGG
 
. : . : . : . : . : . :
rJMFF021K09+ AGGCGGCGATGGAGCTATACCGGAGGAAAGAAGACTCGGAGAAGATTCATCTGCTTCAAG
rJMFF027F18+ AGGCGGCGATGGAGCTATACCGGAGGAAAGAAGACTCGGAGAAGATTCATCTGCTTCAAG
rJMFF024B22+ AGGCGGCGATGGAGCTATACCGGAGGAAAGAAGACTCGGAGAAGATTCATCTGCTTCAAG
rJMFF008D19+ AGGCGGCGATGGAGCTATACCGGAGGAAAGAAGACTCGGAGAAGATTCATCTGCTTCAAG
                      ____________________________________________________________
consensus AGGCGGCGATGGAGCTATACCGGAGGAAAGAAGACTCGGAGAAGATTCATCTGCTTCAAG
 
. : . : . : . : . : . :
rJMFF021K09+ CTCTTCAAGCCATCGAAATGGCGGTGAAACGGTTTTACTACTCTTACAGGCAGCTTTTGG
rJMFF027F18+ CTCTTCAAGCCATCGAAATGGCGGTGAAACGGTTTTACTACTCTTACAGGCAGCTTTTGG
rJMFF024B22+ CTCTTCAAGCCATCGAAATGGCGGTGAAACGGTTTTACTACTCTTACAGGCAGCTTTTGG
rJMFF008D19+ CTCTTCAAGCCATCGAAATGGCGGTGAAACGGTTTTACTACTCTTACAGGCAGCTTTTGG
                      ____________________________________________________________
consensus CTCTTCAAGCCATCGAAATGGCGGTGAAACGGTTTTACTACTCTTACAGGCAGCTTTTGG
 
. : . : . : . : . : . :
rJMFF021K09+ TGATCGTTATGGGGAGCTTAGAAGCTAAGGCGAATCCGGCGTTGGTGAACGCCGATTCCG
rJMFF027F18+ TGATCGTTATGGGGAGCTTAGAAGCTAAGGCGAATCCGGCGTTGGTGAACGCCGATTCCG
rJMFF024B22+ TGATCGTTATGGGGAGCTTAGAAGCTAAGGCGAATCCGGCGTTGGTGAACGCCGATTCCG
rJMFF008D19+ TGATCGTTATGGGGAGCTTAGAAGCTAAGGCGAATCCGGCGTTGGTGAACGCCGATTCCG
                      ____________________________________________________________
consensus TGATCGTTATGGGGAGCTTAGAAGCTAAGGCGAATCCGGCGTTGGTGAACGCCGATTCCG
 
. : . : . : . : . : . :
rJMFF021K09+ GCGACTTGCTAGCTCAAATATTTCTGGAGCCGACTTATTTTCCGAGCTTGGATGCAGNGA
rJMFF027F18+ GCGACTTGCTAGCTCAAATATTTCTGGAGCCGACTTATTTTCCGAGCTTGGATGCAGCGA
rJMFF024B22+ GCGACTTGCTAGCTCAAATATTTCTGGAGCCGACTTATTTTCCGAGCTTGGATGCAGCGA
rJMFF008D19+ GCGACTTGCTAGCTCAAATATTTCTGGAGCCGACTTATTTTCCGAGCTTGGATGCAGCGA
                      ____________________________________________________________
consensus GCGACTTGCTAGCTCAAATATTTCTGGAGCCGACTTATTTTCCGAGCTTGGATGCAGCGA
 
. : . : . : . : . : . :
rJMFF021K09+ AGACGTTTCTGGGGGAGCAGTGGAGTCGCGATCATGGCAGGTCTAGTCCGGAAAGAAGAG
rJMFF027F18+ AGACGTTTCTGGGGGAGCAGTGGAGTCGCGATCATGGCAGGTCTAGTCCGGAAAGAAGAG
rJMFF024B22+ AGACGTTTCTGGGGGAGCAGTGGAGTCGCGATCATGGCAGGTCTAGTCCGGAAAGAAGAG
rJMFF008D19+ AGACGTTTCTGGGGGAGCAGTGGAGTCGCGATCATGGCAGGTCTAGTCCGGAAAGAAGAG
                      ____________________________________________________________
consensus AGACGTTTCTGGGGGAGCAGTGGAGTCGCGATCATGGCAGGTCTAGTCCGGAAAGAAGAG
 
. : . : . : . : . : . :
rJMFF021K09+ GCAAAAATGAGAAATGAGTTGACTCGATTGGCATTCAACTCAGTGACGTNGTAGTCATTT
rJMFF027F18+ GCAAAAATGAGAAATGAGTTGACTCGATTGGCATTCAACTCAGTGACGTTGTAGTCATTT
rJMFF024B22+ GCAAAAATGAGAAATGAGTTGACTCGATTGGCATTCAACTCAGTGACGTTGTAGTCATTT
rJMFF008D19+ GCAAAAATGAGAAATGAGTTGACTCGATTGGCATTCAACTCAGTGACGTTGTAGTCATTT
                      ____________________________________________________________
consensus GCAAAAATGAGAAATGAGTTGACTCGATTGGCATTCAACTCAGTGACGTTGTAGTCATTT
 
. : . : . : . : . : . :
rJMFF021K09+ GACAGCGAAGCATTATCCAAGTTTTTGCCTAAAATATATTTC
rJMFF027F18+ GACAGCGAAGCATTATCCAAGTTTTTGCCTAAAATATATTTC
rJMFF024B22+ GACAGCGAAGCATTATCCAAGTTTTTGCCTAAAATATATTTCATTATTATTATTTTTGGT
rJMFF008D19+ GACAGCGAAGCATTATCCAAGTTTTTGCCTAAAATATATTTCATTATTATTATTTTTGGT
                      ____________________________________________________________
consensus GACAGCGAAGCATTATCCAAGTTTTTGCCTAAAATATATTTCATTATTATTATTTTTGGT
 
. : . : . : . : . : . :
rJMFF024B22+ ATATATATCTGTAGCATACATGAT
rJMFF008D19+ ATATATATCTGTAGCATACATGATGTTGTATAATACCACTTTTCAAAATTTTGCTGTGCT
                      ____________________________________________________________
consensus ATATATATCTGTAGCATACATGATGTTGTATAATACCACTTTTCAAAATTTTGCTGTGCT