Contig 010972:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005E16Sequence532010972 (3)ref|XP_009757893.1|278PREDICTED: putative methyltransferase At1g22800 [Nicotiana sylvestris]733010972 (3)gb|KJB81260.1|5e-120hypothetical protein B456_013G134900 [Gossypium raimondii]
JMFF032A16Sequence702010972 (3)gb|KJB81260.1|2e-112hypothetical protein B456_013G134900 [Gossypium raimondii]

Alignment

This contig is upended


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JMFF005E16-                                                               AGTGTAGT
                      ____________________________________________________________
consensus                                                                 AGTGTAGT
 
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JMFF005E16-           GCTTCTGAACAGCGAACTGTCACCGGAAATGAGGAGAGGCGCGAACGCCATAGCTCTATG
                      ____________________________________________________________
consensus             GCTTCTGAACAGCGAACTGTCACCGGAAATGAGGAGAGGCGCGAACGCCATAGCTCTATG
 
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JMFF005E16-           TCGGAGGGGCCTCAGATCATACTGCACTGAAAACATCGATGGATTGCAGAGCTCCAAACT
                      ____________________________________________________________
consensus             TCGGAGGGGCCTCAGATCATACTGCACTGAAAACATCGATGGATTGCAGAGCTCCAAACT
 
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JMFF005E16-           TAGAATCTTCGATCGCCAGCTTAAACGCAAACAGCGTGATAGAGCGGCATGGTTGATGCG
                      ____________________________________________________________
consensus             TAGAATCTTCGATCGCCAGCTTAAACGCAAACAGCGTGATAGAGCGGCATGGTTGATGCG
 
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JMFF005E16-           CCCCAACGATTCCTTGCTTGATAATGTTTCCGAGAATTTGCTTGATCGTTTGGAGGATTG
                      ____________________________________________________________
consensus             CCCCAACGATTCCTTGCTTGATAATGTTTCCGAGAATTTGCTTGATCGTTTGGAGGATTG
 
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JMFF005E16-           TAGAAAAGCATTTCCTACAGCATTGTGTATGGGGGGCTCCCATGAAGCAGTTAGGCGCTT
                      ____________________________________________________________
consensus             TAGAAAAGCATTTCCTACAGCATTGTGTATGGGGGGCTCCCATGAAGCAGTTAGGCGCTT
 
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JMFF005E16-           GTTACGCGGGCGTGGCGGTATTGAAAAACTAATTATGATGGATTCATCATCCGACATGAT
                      ____________________________________________________________
consensus             GTTACGCGGGCGTGGCGGTATTGAAAAACTAATTATGATGGATTCATCATCCGACATGAT
 
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JMFF005E16-           CAAAGTATGTAAAGATGCTCAGCAAGATAACCCCAATGAGAATGTTGAAACATCATTTAT
                      ____________________________________________________________
consensus             CAAAGTATGTAAAGATGCTCAGCAAGATAACCCCAATGAGAATGTTGAAACATCATTTAT
 
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JMFF005E16-           TGTTGGTGATGAAGAGTTTTTGCCTATCAAAGAAAGTTCCTTGGATCTCGTCATTAGTAG
rJMFF005E16+                                                         TCGTCATTAGTAG
                      ____________________________________________________________
consensus             TGTTGGTGATGAAGAGTTTTTGCCTATCAAAGAAAGTTCCTTGGATCTCGTCATTAGTAG
 
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JMFF005E16-           CTTGGGACTACATTGGACAAATGATCTTCCTGGAGCTATGATCC                
rJMFF032A16+                           CAAATGATCTTCCTGGAGCTATGATCCAGTGTAGATTAGCACT
rJMFF005E16+          CTTGGGACTACATTGGACAAATGATCTTCCTGGAGCTATGATCCAGTGTAGATTAGCACT
                      ____________________________________________________________
consensus             CTTGGGACTACATTGGACAAATGATCTTCCTGGAGCTATGATCCAGTGTAGATTAGCACT
 
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rJMFF032A16+          GAAGCCCGATGGTCTATTCTTGGCAGCAATTCTTGGTGGAGAAACATTAAAGGAACTGAG
rJMFF005E16+          GAAGCCCGATGGTCTATTCTTGGCAGCAATTCTTGGTGGAGAAACATTAAAGGAACTGAG
                      ____________________________________________________________
consensus             GAAGCCCGATGGTCTATTCTTGGCAGCAATTCTTGGTGGAGAAACATTAAAGGAACTGAG
 
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rJMFF032A16+          AATAGCATGTACTGTAGCTCAAATGGAACGTGAAGGAGGCATTAGTCCACGGATGTCACC
rJMFF005E16+          AATAGCATGTACTGTAGCTCAAATGGAACGTGAAGGAGGCATTAGTCCACGGATGTCACC
                      ____________________________________________________________
consensus             AATAGCATGTACTGTAGCTCAAATGGAACGTGAAGGAGGCATTAGTCCACGGATGTCACC
 
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rJMFF032A16+          TTTGGCACATGTGCGGGATGCTGGAAACCTTTTGACCAGGGCAGGCTTCACTCTTCCTGG
rJMFF005E16+          TTTGGCACATGTGCGGGATGCTGGAAACCTTTTGACCAGGGCAGGCTTCACTCTTCCTGG
                      ____________________________________________________________
consensus             TTTGGCACATGTGCGGGATGCTGGAAACCTTTTGACCAGGGCAGGCTTCACTCTTCCTGG
 
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rJMFF032A16+          TGTAGATGTTGATGAATATGTTGTCAGATATAAGAGTGCTTTGGAGCTGATAGAGCATCT
rJMFF005E16+          TGTAGATGTTGATGAATATGTTGTCAGATATAAGAGTGCTTTGGAGCTGATAGAGCATCT
                      ____________________________________________________________
consensus             TGTAGATGTTGATGAATATGTTGTCAGATATAAGAGTGCTTTGGAGCTGATAGAGCATCT
 
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rJMFF032A16+          TCGTGCTATGGGTGAAACTAATGCCCTCTTACAAAGAAGCAATATCTTGAAGAGGGACAC
rJMFF005E16+          TCGTGCTATGGGTGAAACTAATGCCCTCTTACAAAGAAGCAATATCTTGAAGAGGGACAC
                      ____________________________________________________________
consensus             TCGTGCTATGGGTGAAACTAATGCCCTCTTACAAAGAAGCAATATCTTGAAGAGGGACAC
 
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rJMFF032A16+          AGCTATTGCTACAGCAGCCATTTACGAATCGATGTTTGCTGCAGATGATGGCACCATTCC
rJMFF005E16+          AGCTATTGCTACAGCAGCCATTTACGAATCGATGTTTGCTGCAGATGATGGCACCATTCC
                      ____________________________________________________________
consensus             AGCTATTGCTACAGCAGCCATTTACGAATCGATGTTTGCTGCAGATGATGGCACCATTCC
 
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rJMFF032A16+          AGCAACATTCCAGGTCATATACATGACTGGGTGGAGGGAGCATCCTTCTCAACAGAAGGC
rJMFF005E16+          AGCAACATTCCAGGTCATATACATGACTGGGTGGAGGGAGCATCCTTCTCAACAGAAGGC
                      ____________________________________________________________
consensus             AGCAACATTCCAGGTCATATACATGACTGGGTGGAGGGAGCATCCTTCTCAACAGAAGGC
 
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rJMFF032A16+          CAAGTGTAGAGGCTCTGCCACAGTATCCTTTCAGGACATTCAGAAGCAGTTTGGTGGCAA
rJMFF005E16+          CAAGTGTAGAGGCTCTGCCACAGTATCCTTTCAGGACATTCAGAAGCAGTTTGGTGGCAA
                      ____________________________________________________________
consensus             CAAGTGTAGAGGCTCTGCCACAGTATCCTTTCAGGACATTCAGAAGCAGTTTGGTGGCAA
 
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rJMFF032A16+          TAGTAATACCTGAAGTGTTGAACCATCCACATGTGTTGTATAAATGTATTCTGATCTGTG
rJMFF005E16+          TAGTAATACCTGAAGTGTTGAACCATCCACATGTGTTGTATAAATGTATTCTGATCTGTG
                      ____________________________________________________________
consensus             TAGTAATACCTGAAGTGTTGAACCATCCACATGTGTTGTATAAATGTATTCTGATCTGTG
 
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rJMFF032A16+          GACCTCCGCAGATTTTGATAGGTGCACAAATAAATCATAGTATTTATTTACTAATTTCTG
rJMFF005E16+          GACCTCCGCAGATTTTGATAGGTGCACAAATAAATCATAGTATTTATTTACTAATTTCTG
                      ____________________________________________________________
consensus             GACCTCCGCAGATTTTGATAGGTGCACAAATAAATCATAGTATTTATTTACTAATTTCTG
 
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rJMFF032A16+          TATCCCGTGAACAACACAAACCCTTTTTCACTTGACCTAATGCATTTTCATAAATAATA 
rJMFF005E16+          TATCCCGTGAACAACACAAACCCTTTTTCACTTGACCTAATGCATTTTCATAAATAATAT
                      ____________________________________________________________
consensus             TATCCCGTGAACAACACAAACCCTTTTTCACTTGACCTAATGCATTTTCATAAATAATAT