| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005C07 | Sequence | 485 | 010971 (8) | ref|XP_006350994.1| | 8e-12 | PREDICTED: acetylglutamate kinase, chloroplastic-like isoform X1 [Solanum tuber | 730 | 010971 (8) | ref|XP_004249883.1| | 6e-94 | PREDICTED: acetylglutamate kinase, chloroplastic [Solanum lycopersicum] |
| JMFF007I16 | Sequence | 616 | 010971 (8) | ref|XP_006350994.1| | 2e-42 | PREDICTED: acetylglutamate kinase, chloroplastic-like isoform X1 [Solanum tuber | 794 | 010971 (8) | ref|XP_004249883.1| | 1e-133 | PREDICTED: acetylglutamate kinase, chloroplastic [Solanum lycopersicum] |
| JMSF034C01 | Sequence | 646 | 010971 (8) | ref|XP_006350994.1| | 2e-50 | PREDICTED: acetylglutamate kinase, chloroplastic-like isoform X1 [Solanum tuber | 729 | 010971 (8) | ref|XP_004249883.1| | 2e-116 | PREDICTED: acetylglutamate kinase, chloroplastic [Solanum lycopersicum] |
| JMSF048C04 | Sequence | 689 | 010971 (8) | ref|XP_006350994.1| | 5e-61 | PREDICTED: acetylglutamate kinase, chloroplastic-like isoform X1 [Solanum tuber | 739 | 010971 (8) | ref|XP_004249883.1| | 3e-118 | PREDICTED: acetylglutamate kinase, chloroplastic [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF034C01- GTGCATAAT
JMFF007I16- GTGCATAAT
JMFF005C07- GTGCATAAT
JMSF048C04- TGGGGTGCATAAT
____________________________________________________________
consensus TGGGGTGCATAAT
. : . : . : . : . : . :
JMSF034C01- GAAACACAATTTAGCAATAAGAAAACGGTGAAGTTGAGAGTTGGAGAAATCTGGTTTCTC
JMFF007I16- GAAACACAATTTAGCAATAAGAAAACGGTGAAGTTGAGAGTTGGAGAAATCTGGTTTCTC
JMFF005C07- GAAACACAATTTAGCAATAAGAAAACGGTGAAGTTGAGAGTTGGAGAAATCTGGTTTCTC
JMSF048C04- GAAACACAATTTAGCAATAAGAAAACGGTGAAGTTGAGAGTTGGAGAAATCTGGTTTCTC
____________________________________________________________
consensus GAAACACAATTTAGCAATAAGAAAACGGTGAAGTTGAGAGTTGGAGAAATCTGGTTTCTC
. : . : . : . : . : . :
JMSF034C01- CCCTTGCCAGTTGCCATCTTCTGTGTCACCAGTTTTGGCGGCGGCGCCACCATCATCCAC
JMFF007I16- CCCTTGCCAGTTGCCATCTTCTGTGTCACCAGTTTTGGCGGCGGCGCCACCATCATCCAC
JMFF005C07- CCCTTGCCAGTTGCCATCTTCTGTGTCACCAGTTTTGGCGGCGGCGCCACCATCATCCAC
JMSF048C04- CCCTTGCCAGTTGCCATCTTCTGTGTCACCAGTTTTGGCGGCGGCGCCACCATCATCCAC
____________________________________________________________
consensus CCCTTGCCAGTTGCCATCTTCTGTGTCACCAGTTTTGGCGGCGGCGCCACCATCATCCAC
. : . : . : . : . : . :
JMSF034C01- CTGCCGGCTGCCGCTCTTCTCTCTCTCTCGAAGATTGTGAATCTTACTAATAATCCAGAG
JMFF007I16- CTGCCGGCTGCCGCTCTTCTCTCTCTCTCGAAGATTGTGAATCTTACTAATAATCCAGAG
JMFF005C07- CTGCCGGCTGCCGCTCTTCTCTCTCTCTCGAAGATTGTGAATCTTACTAATAATCCAGAG
JMSF048C04- CTGCCGGCTGCCGCTCTTCTCTCTCTCTCGAAGATTGTGAATCTTACTAATAATCCAGAG
____________________________________________________________
consensus CTGCCGGCTGCCGCTCTTCTCTCTCTCTCGAAGATTGTGAATCTTACTAATAATCCAGAG
. : . : . : . : . : . :
JMSF034C01- CTTTGAAGTTTGGAACTTCTAGAAAAATCTGCTGTTACAAATCGTTGCCCTATGTATTGA
JMFF007I16- CTTTGAAGTTTGGAACTTCTAGAAAAATCTGCTGTTACAAATCGTTGCCCTATGTATTGA
JMFF005C07- CTTTGAAGTTTGGAACTTCTAGAAAAATCTGCTGTTACAAATCGTTGCCCTATGTATTGA
JMSF048C04- CTTTGAAGTTTGGAACTTCTAGAAAAATCTGCTGTTACAAATCGTTGCCCTATGTATTGA
____________________________________________________________
consensus CTTTGAAGTTTGGAACTTCTAGAAAAATCTGCTGTTACAAATCGTTGCCCTATGTATTGA
. : . : . : . : . : . :
JMSF034C01- CATCAAGGAGAGGGAAAAAGGAAGAAATGATGGCTGCTAATACCCTCCCTCTGTCTTCCC
JMFF007I16- CATCAAGGAGAGGGAAAAAGGAAGAAATGATGGCTGCTAATACCCTCCCTCTGTCTTCCC
JMFF005C07- CATCAAGGAGAGGGAAAAAGGAAGAAATGATGGCTGCTAATACCCTCCCTCTGTCTTCCC
JMSF048C04- CATCAAGGAGAGGGAAAAAGGAAGAAATGATGGCTGCTAATACCCTCCCTCTGTCTTCCC
____________________________________________________________
consensus CATCAAGGAGAGGGAAAAAGGAAGAAATGATGGCTGCTAATACCCTCCCTCTGTCTTCCC
. : . : . : . : . : . :
JMSF034C01- CTATCTCAAAGGCCTTTCGTGTTCGTGATCCTAATCTCAGCCTCCCACAATCTATCCCTG
JMFF007I16- CTATCTCAAAGGCCTTTCGTGTTCGTGATCCTAATCTCAGCCTCCCACAATCTATCCCTG
JMFF005C07- CTATCTCAAAGGCCTTTCGTGTTCGTGATCCTAATCTCAGCCTCCCACAATCTATCCCTG
JMSF048C04- CTATCTCAAAGGCCTTTCGTGTTCGTGATCCTAATCTCAGCCTCCCACAATCTATCCCTG
____________________________________________________________
consensus CTATCTCAAAGGCCTTTCGTGTTCGTGATCCTAATCTCAGCCTCCCACAATCTATCCCTG
. : . : . : . : . : . :
JMSF034C01- TCAGTACAAAATTCAACAAAAAGCCTTTCCTCACCTCATGCCTCAAGACCTCCTTGGAAT
JMFF007I16- TCAGTACAAAATTCAACAAAAAGCCTTTCCTCACCTCATGCCTCAAGACCTCCTTGGAAT
JMFF005C07- TCAGTACAAAATTCAACAAAAAGCCTTTCCTCACCTCATGCCTCAAGACCTCCTTGGAAT
JMSF048C04- TCAGTACAAAATTCAACAAAAAGCCTTTCCTCACCTCATGCCTCAAGACCTCCTTGGAAT
____________________________________________________________
consensus TCAGTACAAAATTCAACAAAAAGCCTTTCCTCACCTCATGCCTCAAGACCTCCTTGGAAT
. : . : . : . : . : . :
JMSF034C01- CTATTGTAGCACCAGAAACCATTTCAACACCAGCACCAACCCGAGTCAAAATCCTTTCAG
JMFF007I16- CTATTGTAGCACCAGAAACCATTTCAACACCAGCACCAACCCGAGTCAAAATCCTTTCAG
JMFF005C07- CTATTGTAGCACCAGAAACCATTTCAACACCAGCACCAACCCGAGTCAAAATC
JMSF048C04- CTATTGTAGCACCAGAAACCATTTCAACACCAGCACCAACCCGAGTCAAAATCCTTTCAG
____________________________________________________________
consensus CTATTGTAGCACCAGAAACCATTTCAACACCAGCACCAACCCGAGTCAAAATCCTTTCAG
. : . : . : . : . : . :
JMSF034C01- AAGCATTGCCTTTTATTCAGAAGTTTCGAGGCAAGACAATTGTAGTAAAATATGGAGGAG
JMFF007I16- AAGCATTGCCTTTTATTCAGAAGTTTCGAGGCAAGACAATTGTAGTAAAATATGGAGGAG
JMSF048C04- AAGCATTGCCTTTTATTCAGAAGTTTCGAGGCAAGACAATTGTAGTAAAATATGGAGGAG
____________________________________________________________
consensus AAGCATTGCCTTTTATTCAGAAGTTTCGAGGCAAGACAATTGTAGTAAAATATGGAGGAG
. : . : . : . : . : . :
JMSF034C01- CTGCAATGAAATCAGAAGCCCTTCAGGCTTCTGTTATTACTGATCTTGTCCTCCTTTCTT
JMFF007I16- CTGCAATGAAATCAGAAGCCCTTCAGGCTTCTGTTATTACTGATCTTGTCCTCCTTTCTT
JMSF048C04- CTGCAATGAAATCAGAAGCCCTTCAGGCTTCTGTTATTACTGATCTTGTCCTCCTTTCTT
____________________________________________________________
consensus CTGCAATGAAATCAGAAGCCCTTCAGGCTTCTGTTATTACTGATCTTGTCCTCCTTTCTT
. : . : . : . : . : . :
JMSF034C01- GTGTTGGCCTCCGCATTGTTTTTGTCCATGGCGGG
JMFF007I16- GTGTT
JMSF048C04- GTGTTGGCCTCCGCATTGTTTTTGTCCATGGCGGGGGTCCAGAGATCAACCAGTGGCTTG
rJMFF007I16+ CATGGCGGGGGTCCAGAGATCAACCAGTGGCTTG
____________________________________________________________
consensus GTGTTGGCCTCCGCATTGTTTTTGTCCATGGCGGGGGTCCAGAGATCAACCAGTGGCTTG
. : . : . : . : . : . :
JMSF048C04- GACGTTTGGGAATCCA
rJMSF034C01+ AAATGGGCTTCGTGTAACTGATGCCTCTACAA
rJMFF007I16+ GACGTTTGGGAATCCAACCCAACTTCTTAAATGGGCTTCGTGTAACTGATGCCTCTACAA
rJMSF048C04+ AAATGGGCTTCGTGTAACTGATGCCTCTACAA
____________________________________________________________
consensus GACGTTTGGGAATCCAACCCAACTTCTTAAATGGGCTTCGTGTAACTGATGCCTCTACAA
. : . : . : . : . : . :
rJMSF034C01+ TGGAGATTGTGTCCATGGTGTTGGTGGGTAAGGTTAACAAACATCTTGTCGCCTTGATCA
rJMFF007I16+ TGGAGATTGTGTCCATGGTGTTGGTGGGTAAGGTTAACAAACATCTTGTCGCCTTGATCA
rJMSF048C04+ TGGAGATTGTGTCCATGGTGTTGGTGGGTAAGGTTAACAAACATCTTGTCGCCTTGATCA
rJMFF005C07+ GCCTTGATCA
____________________________________________________________
consensus TGGAGATTGTGTCCATGGTGTTGGTGGGTAAGGTTAACAAACATCTTGTCGCCTTGATCA
. : . : . : . : . : . :
rJMSF034C01+ ACAAGGCAGGGGCAACTGCAGTCGGGTTATCAGGTATTGATGGCCAGCTTCTAACTGCCC
rJMFF007I16+ ACAAGGCAGGGGCAACTGCAGTCGGGTTATCAGGTATTGATGGCCAGCTTCTAACTGCCC
rJMSF048C04+ ACAAGGCAGGGGCAACTGCAGTCGGGTTATCAGGTATTGATGGCCAGCTTCTAACTGCCC
rJMFF005C07+ NCAAGGCAGGGGCAACTGCAGTCGGGTTATCAGGTATTGATGGCCAGCTTNTAACTGCCC
____________________________________________________________
consensus ACAAGGCAGGGGCAACTGCAGTCGGGTTATCAGGTATTGATGGCCAGCTTCTAACTGCCC
. : . : . : . : . : . :
rJMSF034C01+ GACCCTCCCCAAACTCTGCACAGCTTGGTTTCGTTGGTGAGATTCAAAGTGTAGACACCA
rJMFF007I16+ GACCCTCCCCAAACTCTGCACAGCTTGGTTTCGTTGGTGAGATTCAAAGTGTAGACACCA
rJMSF048C04+ GACCCTCCCCAAACTCTGCACAGCTTGGTTTCGTTGGTGAGATTCAAAGTGTAGACACCA
rJMFF005C07+ GACCCTCCCCAAACTCTGCACAGCTTGGTTTCGTTGGTGAGATTCAAAGTGTAGACACCA
____________________________________________________________
consensus GACCCTCCCCAAACTCTGCACAGCTTGGTTTCGTTGGTGAGATTCAAAGTGTAGACACCA
. : . : . : . : . : . :
rJMSF034C01+ ATGTGTTGAGGCCCCTCATTGACAACTATCACATCCCAGTGATTGCCTCTGTTGCAGCTG
rJMFF007I16+ ATGTGTTGAGGCCCCTCATTGACAACTATCACATCCCAGTGATTGCCTCTGTTGCAGCTG
rJMSF048C04+ ATGTGTTGAGGCCCCTCATTGACAACTATCACATCCCAGTGATTGCCTCTGTTGCAGCTG
rJMFF005C07+ ATGTGTTGAGGCCCCTCATTGACAACTATCACATCCCAGTGATTGCCTCTGTTGCAGCTG
____________________________________________________________
consensus ATGTGTTGAGGCCCCTCATTGACAACTATCACATCCCAGTGATTGCCTCTGTTGCAGCTG
. : . : . : . : . : . :
rJMSF034C01+ ATAAGTCGGGACAATCATACAACATCAATGCAGACACTGCAGCAGGGGAGTTGGCAGCAG
rJMFF007I16+ ATAAGTCGGGACAATCATACAACATCAATGCAGACACTGCAGCAGGGGAGTTGGCAGCAG
rJMSF048C04+ ATAAGTCGGGACAATCATACAACATCAATGCAGACACTGCAGCAGGGGAGTTGGCAGCAG
rJMFF005C07+ ATAAGTCGGGACAATCATACAACATCAATGCAGACACTGCAGCAGGGGAGTTGGCAGCAG
____________________________________________________________
consensus ATAAGTCGGGACAATCATACAACATCAATGCAGACACTGCAGCAGGGGAGTTGGCAGCAG
. : . : . : . : . : . :
rJMSF034C01+ CATTAGGAGCTGAAAAACTTATCCTTTTGACGGATGTGGCTGGGATTTTGGAAAACCGAG
rJMFF007I16+ CATTAGGAGCTGAAAAACTTATCCTTTTGACGGATGTGGCTGGGATTTTGGAAAACCGAG
rJMSF048C04+ CATTAGGAGCTGAAAAACTTATCCTTTTGACGGATGTGGCTGGGATTTTGGAAAACCGAG
rJMFF005C07+ CATTAGGAGCTGAAAAACTTATCCTTTTGACGGATGTGGCTGGGATTTTGGAAAACCGAG
____________________________________________________________
consensus CATTAGGAGCTGAAAAACTTATCCTTTTGACGGATGTGGCTGGGATTTTGGAAAACCGAG
. : . : . : . : . : . :
rJMSF034C01+ ATGATCCAGGAAGTTTGGTGAAGGAGGTTGATATCAAAGGAGTGAAGAAGATGATGGATG
rJMFF007I16+ ATGATCCAGGAAGTTTGGTGAAGGAGGTTGATATCAAAGGAGTGAAGAAGATGATGGATG
rJMSF048C04+ ATGATCCAGGAAGTTTGGTGAAGGAGGTTGATATCAAAGGAGTGAAGAAGATGATGGATG
rJMFF005C07+ ATGATCCAGGAAGTTTGGTGAAGGAGGTTGATATCAAAGGAGTGAAGAAGATGATGGATG
____________________________________________________________
consensus ATGATCCAGGAAGTTTGGTGAAGGAGGTTGATATCAAAGGAGTGAAGAAGATGATGGATG
. : . : . : . : . : . :
rJMSF034C01+ ATGGCAAGATTAGTGGTGGGATGATTCCTAAAGTGAATTGTTGTGTGAGGTCTCTGGCTC
rJMFF007I16+ ATGGCAAGATTAGTGGTGGGATGATTCCTAAAGTGAATTGTTGTGTGAGGTCTCTGGCTC
rJMSF048C04+ ATGGCAAGATTAGTGGTGGGATGATTCCTAAAGTGAATTGTTGTGTGAGGTCTCTGGCTC
rJMFF005C07+ ATGGCAAGATTAGTGGTGGGATGATTCCTAAAGTGAATTGTTGTGTGAGGTCTCTGGCTC
____________________________________________________________
consensus ATGGCAAGATTAGTGGTGGGATGATTCCTAAAGTGAATTGTTGTGTGAGGTCTCTGGCTC
. : . : . : . : . : . :
rJMSF034C01+ AAGGGGTAAGGACTGCTAGTATCATTGATGGCCGGCTAGAGCACTCCCTGCTACTTGAGA
rJMFF007I16+ AAGGGGTAAGGACTGCTAGTATCATTGATGGCCGGCTAGAGCACTCCCTGCTACTTGAGA
rJMSF048C04+ AAGGGGTAAGGACTGCTAGTATCATTGATGGCCGGCTAGAGCACTCCCTGCTACTTGAGA
rJMFF005C07+ AAGGGGTAAGGACTGCTAGTATCATTGATGGCCGGCTAGAGCACTCCCTGCTACTTGAGA
____________________________________________________________
consensus AAGGGGTAAGGACTGCTAGTATCATTGATGGCCGGCTAGAGCACTCCCTGCTACTTGAGA
. : . : . : . : . : . :
rJMSF034C01+ TTTTAACTGATGAAGGAGCTGGAACAATGATTACTGGGTAAATCACGGTGCACATAATAC
rJMFF007I16+ TTTTAACTGATGAAGGAGCTGGAACAATGATTACTGGGTAAATCACGGTGCACATAATAC
rJMSF048C04+ TTTTAACTGATGAAGGAGCTGGAACAATGATTACTGGGTAAATCACGGTGCACATAATAC
rJMFF005C07+ TTTTAACTGATGAAGGAGCTGGAACAATGATTACTGGGTAAATCACGGTGCACATAATAC
____________________________________________________________
consensus TTTTAACTGATGAAGGAGCTGGAACAATGATTACTGGGTAAATCACGGTGCACATAATAC
. : . : . : . : . : . :
rJMSF034C01+ CAGTGGTTAACCCGTATTGTTAAGCAGTTTGATCAATTTGGCTTTATTCAAGAACTACTA
rJMFF007I16+ CAGTGGTTAACCCGTATTGTTAAGCAGTTTGATCAATTTGGCTTTATTCAAGAACTACTA
rJMSF048C04+ CAGTGGTTAACCCGTATTGTTAAGCAGTTTGATCAATTTGGCTTTATTCAAGAACTACTA
rJMFF005C07+ CAGTGGTTAACCCGTATTGTTAAGCAGTTTGATCAATTTGGCTTTATTCAAGAACTACTA
____________________________________________________________
consensus CAGTGGTTAACCCGTATTGTTAAGCAGTTTGATCAATTTGGCTTTATTCAAGAACTACTA
. : . : . : . : . : . :
rJMSF034C01+ TTTGCTTGTAAGCTGAGCTGAAATTTACTCAACGGAC
rJMFF007I16+ TTTGCTTGTAAGCTGAGCTGAAATTTACTCAACGGAC
rJMSF048C04+ TTTGCTTGTAAGCTGAGCTGAAATTTACTCAACGGAC
rJMFF005C07+ TTTGCTTGTAAGCTGAGCTGAAATTTACTCAACGGACAAATGTTTGTTTTAGTAATTAAT
____________________________________________________________
consensus TTTGCTTGTAAGCTGAGCTGAAATTTACTCAACGGACAAATGTTTGTTTTAGTAATTAAT
. : . : . : . : . : . :
rJMFF005C07+ GTTGCACCATTTGGGCAATGAGGCATTCTGAATTTCTTATTGCTGCATCACTGACTGCAT
____________________________________________________________
consensus GTTGCACCATTTGGGCAATGAGGCATTCTGAATTTCTTATTGCTGCATCACTGACTGCAT