asagaodb

Contig 010950: Sequence
BLAST Hits against nr-aa DB Show

clone	5'-sequence						3'-sequence
clone	Seq.	length	contig	BestHit	Evalue	description	length	contig	BestHit	Evalue	description
JMFS045D10	Sequence	592	010950 (10)
JMFS087F03	Sequence	612	010950 (10)
JMFS167F10	Sequence	605	010950 (10)
JMFS167G09	Sequence	599	010950 (10)
JMSF005H03	Sequence	374	010950 (10)
JMSF008P21	Sequence	218	010950 (10)				368	005372 (9)	ref\|XP_006345385.1\|	2e-14	PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform X2 [Solan
JMSF012F20	Sequence	190	010950 (10)				506	005372 (9)	ref\|XP_006345385.1\|	6e-23	PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform X2 [Solan
JMSF034J10	Sequence	376	010950 (10)
JMSF046A19	Sequence	446	010950 (10)
JMSF052P21	Sequence	459	010950 (10)				890	005372 (9)	ref\|XP_009793355.1\|	4e-52	PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform X2 [Nicot
Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF008P21+                           CTGGGTTGGTAGCAATATTCCACTCCAACCCTCCAAACCCTTCT
JMFS087F03+             CATCCATTTTCTTNCTGGGTTGGTAGCAATATTCCACTCCAACCCTCCAAACCCTTCT
JMFS045D10+                                  GGTAGCAATATTCCACTCCAACCCTCCAAACCCTTCT
JMFS167G09+                                                 CTCCAACCCTCCAAACCCTTCT
JMFS167F10+                                            TTCCACTCCAACCCTCCAAACCCTTCT
                      ____________________________________________________________
consensus               CATCCATTTTCTTNCTGGGTTGGTAGCAATATTCCACTCCAACCCTCCAAACCCTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF008P21+           CTCTCTCTCTCTTTCTTCCTCGCAAGAACTAAGCAAAGCTAAGTTACCCTTTAACCTCTC
JMFS087F03+           CTCTCTCTCTCTTTCTTCCTCGCAAGAACTAAGCAAAGCTAAGTTACCCTTTAACCTCTC
JMFS045D10+           CTCTCTCTCTCTTTNTTCCTCGCAAGAACTAAGCAAAGCTAAGTTACCCTTTAACCTCTC
JMFS167G09+           CTCTCTCTCTCTTTTTTCCTCGCAAGAACTAAGCAAAGCTAAGTTACCCTTTAACCTCTC
JMFS167F10+           CTCTCTCTCTCTTTNTTCCTCGCAAGAACTAAGCAAAGCTAAGTTACCCTTTAACCTCTC
                      ____________________________________________________________
consensus             CTCTCTCTCTCTTTCTTCCTCGCAAGAACTAAGCAAAGCTAAGTTACCCTTTAACCTCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF008P21+           CCTGCAAAAAACAGCCCAGAAAA                                     
JMFS087F03+           CCTGCAAAAAACAGCCCAGAAAACTAAAAATATAAAAGTAGGTAAAACTTAAAAGTAGCA
JMFS045D10+           CCTGCAAAAAACAGCCCAGAAAACTAAAAATATAAAAGTAGGTAAAACTTAAAAGTAGCA
JMFS167G09+           CCTGCAAAAAACAGCCCAGAAAACTAAAAATATAAAAGTAGGTAAAACTTAAAAGTAGCA
JMFS167F10+           CCTGCAAAAAACAGCCCAGAAAACTAAAAATATAAAAGTAGGTAAAACTTAAAAGTAGCA
                      ____________________________________________________________
consensus             CCTGCAAAAAACAGCCCAGAAAACTAAAAATATAAAAGTAGGTAAAACTTAAAAGTAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087F03+           GTAAGCAAAAACTAGAAGGAAAAAG--AAAAAAAAAAAAAGATTTGATTTTGAAGGTTCC
JMFS045D10+           GTAAGCAAAAACTAGAAGGAAAAAG---AAAAAAAAAAAAGATTTGATTTTGAAGGTTCC
JMSF034J10+                                        AAAAAAAAAAAGATTTGATTTTGAAGGTTCC
JMFS167G09+           GTAAGCAAAAACTAGAAGGAAAAAGAAAAAAAAAAAAAAAGATTTGATTTTGAAGGTTCC
JMFS167F10+           GTAAGCAAAAACTAGAAGGAAAAAG--AAAAAAAAAAAAAGATTTGATTTTGAAGGTTCC
JMSF046A19+                                       AAAAAAAAAAAAGATTTGATTTTGAAGGTTCC
JMSF052P21+                                      AAAAAAAAAAAAAGATTTGATTTTGAAGGTTCC
                      ____________________________________________________________
consensus             GTAAGCAAAAACTAGAAGGAAAAAG--AAAAAAAAAAAAAGATTTGATTTTGAAGGTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087F03+           CTCTGCAGAAAGGAAGCTAAATATGGAGGTGGGTGTACTTCTCTAGTCTTTACACAAAGC
JMFS045D10+           CTCTGCAGAAAGGAAGCTAAATATGGAGGTGGGTGTACTTCTNTAGTCTTTACACAAAGC
JMSF034J10+           CTCTGCAGAAAGGAAGCTAAATATGGAGGTGGGTGTACTTCTCTAGTCTTTACACAAAGC
JMFS167G09+           CTCTGCAGAAAGGAAGCTAAATATGGAGGTGGGTGTACTTCTCTAGTCTTTACACAAAGC
JMFS167F10+           CTCTGCAGAAAGGAAGCTAAATATGGAGGTGGGTGTACTTCTCTAGTCTTTACACAAAGC
JMSF046A19+           CTCTGCAGAAAGGAAGCTAAATATGGAGGNGGGNGTACTTCTNTNGTCTTTACACAAAGC
JMSF005H03+                                                      TAGTCTTTACACAAAGC
JMSF052P21+           CTCTGCAGAAAGGAAGCTAAATATGGAGGNGGGNGTACTTCTCTAGTCTTTACACAAAGC
                      ____________________________________________________________
consensus             CTCTGCAGAAAGGAAGCTAAATATGGAGGTGGGTGTACTTCTCTAGTCTTTACACAAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087F03+           TGAAAGCAAGAAGCTGATGAAGAAATAAAGCCAACAAGAAAAGCTAAAACTGGAAGCACA
JMFS045D10+           TGAAAGCAAGAAGCTGATGAAGAAATAAAGCCAACAAGAAAAGCTAAAACTGGAAGCACA
JMSF034J10+           TGAAAGCAAGAAGCTGATGAAGAAATAAAGCCAACAAGAAAAGCTAAAACTGGAAGCACA
JMFS167G09+           TGAAAGCAAGAAGCTGATGAAGAAATAAAGCCAACAAGAAAAGCTAAAACTGGAAGCACA
JMFS167F10+           TGAAAGCAAGAAGCTGATGAAGAAATAAAGCCAACAAGAAAAGCTAAAACTGGAAGCACA
JMSF046A19+           TGAAAGCAAGAAGCTGATGAAGAAATAAAGCCAACAAGAAAAGNTAAAACTGGAAGCACA
JMSF005H03+           TGAAAGCAAGAAGCTGATGAAGAAATAAAGCCAACAAGAAAAGCTAAAACTGGAAGCACA
JMSF052P21+           TGAAAGCAAGAAGCTGATGAAGAAATAAAGCCAACAAGAAAAGCTAAAACTGGAAGCACA
                      ____________________________________________________________
consensus             TGAAAGCAAGAAGCTGATGAAGAAATAAAGCCAACAAGAAAAGCTAAAACTGGAAGCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087F03+           CCACACTGGAATCTCTCACTCCTCCCTACTCTCTTATTACCATGTTTTTCCAAATTGAAA
JMFS045D10+           CCACACTGGAATCTCTCACTCCTCCCTACTCTCTTATTACCATGTTTTTCCAAATTGAAA
JMSF034J10+           CCNCACTGGAATCTCTCACTCCTCCCTACTCTNTTATTACCATGTTTTTCCAAATTGAAA
JMFS167G09+           CCACACTGGAATCTCTCACTCCTCCCTACTCTCTTATTACCATGTTTTTCCAAATTGAAA
JMFS167F10+           CCACACTGGAATCTCTCACTCCTCCCTACTCTCTTATTACCATGTTTTTCCAAATTGAAA
JMSF046A19+           CCACACNGGAATCTCTCACTCCTCCCTACTCTCTTATTACCATGTTTTTCCAAATTGAAA
JMSF005H03+           CCACACTGGAATCTCTCACTCCTCCCTACTCTCTTATTACCATGTTTTTCCAAATTGAAA
JMSF052P21+           CCACACTGGAATCTCTCACTCCTCCCTACTCTCTTATTACCATGTTTTTCCAAATTGAAA
                      ____________________________________________________________
consensus             CCACACTGGAATCTCTCACTCCTCCCTACTCTCTTATTACCATGTTTTTCCAAATTGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087F03+           TACCCATAAACAAAAAGTTAACAATCAAAACAAGTACAGATTACCCATTGAAGATCTGCA
JMFS045D10+           TACCCATAAACAAAAAGTTAACAATCAAAACAAGTACAGATTACCCATTGAAGATCTGCA
JMSF034J10+           TACCCATAAACAAAAAGTTAACAATCAAAACAAGTACAGATTACCCATTGAAGATCTGCA
JMFS167G09+           TACCCATAAACAAAAAGTTAACAATCAAAACAAGTACAGATTACCCATTGAAGATCTGCA
JMFS167F10+           TACCCATAAACAAAAAGTTAACAATCAAAACAAGTACAGATTACCCATTGAAGATCTGCA
JMSF046A19+           TACCCATAAACAAAAAGTTAACAATCAAAACAAGTACAGNTTACCCNTTGAAGATNTGCA
JMSF005H03+           TACCCATAAACAAAAAGTTAACAATCAAAACAAGTACAGATTACCCNTTGAAGATCTGCA
JMSF012F20+                                                          TTGAAGATCTGCA
JMSF052P21+           TACCCATAAACAAAAAGTTAACAATCAAAACAAGTACAGATTACCCATTGAAGATCTGCA
                      ____________________________________________________________
consensus             TACCCATAAACAAAAAGTTAACAATCAAAACAAGTACAGATTACCCATTGAAGATCTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087F03+           CACAAAATCTTACACCTTTGACCAGAAAAGAAACAATTTTTTTTTTCTCTCAAGATAAAC
JMFS045D10+           CACAAAATCTTACACCTTTGACCAGAAAAGAAACAATTTTTTTTTTCTCTCAAGATAAAC
JMSF034J10+           CACAAAATNTTACACCTTTGACCAGAAAAGAAACAATTTTTTTTTTCTGTCAAGATAAAC
JMFS167G09+           CACAAAATCTTACACCTTTGACCAGAAAAGAAACAATTTTTTTTTTCTCTCAAGATAAAC
JMFS167F10+           CACAAAATCTTACACCTTTGACCAGAAAAGAAACAATTTTTTTTTTCTCTCAAGATAAAC
JMSF046A19+           CACAAAATNTTACACCTTTGACCAGAAAAGAAACAATTTTTTTTTTCTCTCAAGATAAAC
JMSF005H03+           CACAAAATNTTACACCTTTGATCAGAAAAGAAACAATTTTTTTTTTCTCTCAAGATAAAC
JMSF012F20+           CACAAAATCTTACACCTTTGACCAGAAAAGAAACAATTTTTTTTTTCTCTCAAGATAAAC
JMSF052P21+           CACAAAATCTTACACCTTTGACCAGAAAAGAAACAATTTTTTTTTTCTCTCAAGATAAAC
                      ____________________________________________________________
consensus             CACAAAATCTTACACCTTTGACCAGAAAAGAAACAATTTTTTTTTTCTCTCAAGATAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087F03+           AGAAGAAGCTGCAGACCATAACCCCTTCTTTTTCTTTCCCAAACACCCCTATAATTTGCA
JMFS045D10+           AGAAGAAGCTGCAGACCATAACCCCTTCTTTTTCTTTCCCAAACACCCCTATAATTTGCA
JMSF034J10+           AGAAGAAGCTGCAGACCAT                                         
JMFS167G09+           AGAAGAAGCTGCAGACCATAACCCCTTCTTTTTCTTTCCCAAACACCCCTATAATTTGCA
JMFS167F10+           AGAAGAAGCTGCAGACCATAACCCCTTCTTTTTCTTTCCCAAACACCCCTATAATTTGCA
JMSF046A19+           AGAAGAAGCTGCAGACCATAACCCCTTCTTTTTCTTTCCCAAACACCCCTATAATTTGCA
JMSF005H03+           AGAAGAAGCTGCAGACCATAACCCCTTCTTTTTCTTTCCCAAACACCCCTATAATTTGCA
JMSF012F20+           AGAAGAAGCTGCAGACCATAACCCCTTCTTTTTCTTTCCCAAACACCCCTATAATTTGCA
JMSF052P21+           AGAAGAAGCTGCAGACCATAACCCCTTCTTTTTCTTTCCCAAACACCCCTATAATTTGCA
                      ____________________________________________________________
consensus             AGAAGAAGCTGCAGACCATAACCCCTTCTTTTTCTTTCCCAAACACCCCTATAATTTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087F03+           GGTTTCTTTCAATTCC                                            
JMFS045D10+           GGTTTCTTTCAATTCCCA                                          
JMFS167G09+           GGTTTCTTTCAATTCCCAACGAGAGAGAGAGAGAGAG                       
JMFS167F10+           GGTTTCTTTCAATTCCCAACGAGAGAGAGAGAGAGAGGGA                    
JMSF046A19+           GGTTTCTTTCAATTCCCAACGAGAGAGAGAGAGAGAGGGAGGC                 
JMSF005H03+           GGTTTCTTTCAATTCCCAACGAGAGAGAGAGAGAGAGGGAGGCTATGGAACT        
JMSF012F20+           GGTTTCTTTCAATTCCCAACGAGAGAGAGAGAGAGAGGGAGGCTATGGAACTTACT    
JMSF052P21+           GGTTTCTTTCAATTCCCAACGAGAGAGAGAGAGAGAGGGAGGCTATGGAACTTACTACCC
                      ____________________________________________________________
consensus             GGTTTCTTTCAATTCCCAACGAGAGAGAGAGAGAGAGGGAGGCTATGGAACTTACTACCC
Contig 010950: SequenceBLAST Hits against nr-aa DB Show

Alignment

Contig 010950: Sequence
BLAST Hits against nr-aa DB Show
