Contig 010937:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS038C01Sequence607010937 (2)gb|EYU35995.1|6e-13hypothetical protein MIMGU_mgv1a001908mg [Erythranthe guttata]
JMSF051F18Sequence701010937 (2)gb|EYU35995.1|2e-12hypothetical protein MIMGU_mgv1a001908mg [Erythranthe guttata]660017285ref|XP_008349834.1|1e-16PREDICTED: serrate RNA effector molecule-like [Malus domestica] ref|XP_008349835

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS038C01+ GATGCAAAAGCATCACCAAGTCCACCTCGACCAGAATC
JMSF051F18+ CCTGATGCAAAAGCATCACCAAGTCCACCTCGACCAGAATC
                      ____________________________________________________________
consensus CCTGATGCAAAAGCATCACCAAGTCCACCTCGACCAGAATC
 
. : . : . : . : . : . :
JMFS038C01+ CCAGTCTTGGTAACCACCAGATGAACGACCGGCAAATCGACCAGGGGGCCTCTCATCAGG
JMSF051F18+ CCAGTCTTGGTAACCACCAGATGAACGACCGGCAAATCGACCAGGGGGCCTCTCATCAGG
                      ____________________________________________________________
consensus CCAGTCTTGGTAACCACCAGATGAACGACCGGCAAATCGACCAGGGGGCCTCTCATCAGG
 
. : . : . : . : . : . :
JMFS038C01+ ATATCCAGCCCTGCCTCCCATTTCACGGTCATACCCACCTGGATAGTCATAGCCACCAAA
JMSF051F18+ ATATCCAGCCCTGCCTCCCATTTCACGGTCATACCCACCTGGATAGTCATAGCCACCAAA
                      ____________________________________________________________
consensus ATATCCAGCCCTGCCTCCCATTTCACGGTCATACCCACCTGGATAGTCATAGCCACCAAA
 
. : . : . : . : . : . :
JMFS038C01+ CCTCCTATCACCAGGACCATAACCACCTCTGGGTCGGCCATCATATTCATCCCTACGAGA
JMSF051F18+ CCTCCTATCACCAGGACCATAACCACCTCTGGGTCGGCCATCATATTCATCCCTACGAGA
                      ____________________________________________________________
consensus CCTCCTATCACCAGGACCATAACCACCTCTGGGTCGGCCATCATATTCATCCCTACGAGA
 
. : . : . : . : . : . :
JMFS038C01+ ACGCTTGTAGGGCGGATTTGGAGAGGAGCGCCGGTTAGGAGAATGGCCACCTCGACGGTC
JMSF051F18+ ACGCTTGTAGGGCGGATTTGGAGAGGAGCGCCGGTTAGGAGAATGGCCACCTCGACGGTC
                      ____________________________________________________________
consensus ACGCTTGTAGGGCGGATTTGGAGAGGAGCGCCGGTTAGGAGAATGGCCACCTCGACGGTC
 
. : . : . : . : . : . :
JMFS038C01+ ACGGTAGAGAGGGGGAGGAGGGCTCGGGCTAGGGCGGCCGCGCTTGTACTCGCGCTCTCG
JMSF051F18+ ACGGTAGAGAGGGGGAGGAGGGCTCGGGCTAGGGCGGCCGCGCTTGTACTCGCGCTCTCG
                      ____________________________________________________________
consensus ACGGTAGAGAGGGGGAGGAGGGCTCGGGCTAGGGCGGCCGCGCTTGTACTCGCGCTCTCG
 
. : . : . : . : . : . :
JMFS038C01+ AGGAGGTGGGGGCGGTGGTGAGCGGTTGCGATCATAGTAGTCCCCGCGGCCACCCCGCCT
JMSF051F18+ AGGAGGTGGGGGCGGTGGTGAGCGGTTGCGATCATAGTAGTCCCCGCGGCCACCCCGCCT
                      ____________________________________________________________
consensus AGGAGGTGGGGGCGGTGGTGAGCGGTTGCGATCATAGTAGTCCCCGCGGCCACCCCGCCT
 
. : . : . : . : . : . :
JMFS038C01+ ATCAGAATCCCGTTCATCCCTGCGTTCGCGAGAGTCCCGGTCGCGGCCTCTCCTGGGAGG
JMSF051F18+ ATCAGAATCCCGTTCATCCCTGCGTTCGCGAGAGTCCCGGTCGCGGCCTCTCCTGGGAGG
                      ____________________________________________________________
consensus ATCAGAATCCCGTTCATCCCTGCGTTCGCGAGAGTCCCGGTCGCGGCCTCTCCTGGGAGG
 
. : . : . : . : . : . :
JMFS038C01+ AGGCGGTGGCGGCGGTGAAGAGTCGGCATCCTCCGCAGACTTGTTGATATTCTCCTTGCT
JMSF051F18+ AGGCGGTGGCGGCGGTGAAGAGTCGGCATCCTCCGCAGACTTGTTGATATTCTCCTTGCT
                      ____________________________________________________________
consensus AGGCGGTGGCGGCGGTGAAGAGTCGGCATCCTCCGCAGACTTGTTGATATTCTCCTTGCT
 
. : . : . : . : . : . :
JMFS038C01+ ACGCTCGCTCGCAAGGTCCACGACATCCACGCTGGCTTCCATTGCTTCAGTCATTGATGG
JMSF051F18+ ACGCTCGCTCGCAAGGTCCACGACATCCACGCTGGCTTCCATTGCTTCAGTCATTGATGG
                      ____________________________________________________________
consensus ACGCTCGCTCGCAAGGTCCACGACATCCACGCTGGCTTCCATTGCTTCAGTCATTGATGG
 
. : . : . : . : . : . :
JMFS038C01+ CAGCTCGTCGGACGACGCGGCGGCGGTGT
JMSF051F18+ CAGCTCGTCGGACGACGCGGCGGCGGTGTTGGCGGTTCGGAGCAGCTAAACCCTAGGTCC
                      ____________________________________________________________
consensus CAGCTCGTCGGACGACGCGGCGGCGGTGTTGGCGGTTCGGAGCAGCTAAACCCTAGGTCC
 
. : . : . : . : . : . :
JMSF051F18+ CTCTGCTTGTATCTATGTAATAACGATTGGAAATGAAATCTGAGGATGGGGTCTTTGTTC
                      ____________________________________________________________
consensus CTCTGCTTGTATCTATGTAATAACGATTGGAAATGAAATCTGAGGATGGGGTCTTTGTTC